Gene Sterm_3028 details

Gene Information

• Locus tag: Sterm_3028
• ID: 8598482
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 3168645
• End bp: 3169403
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 35%
• Product: transcriptional regulator, DeoR family
• Protein accession: YP_003309801
• Protein GI: 269121624

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGCAA AAGAACGTTT ATTATATATT ATTAAGAGAC TGCAGGCTCA ACCATCTATA 
AGTGTTGCTG ATCTTTGCAA AGAATTACAA GTGTCAAAAT CAACTATTCA AAGAGATTTG 
AAAATTCTGG AAGATGAAGG AAAAATTTCA AGAGAACGAG GAGGTGCTGT CCAAAAAAAT 
CTGGATGAGA TAATGAGTGA CCTCACAGAA ATACCGGTTA TTGAAAAAGT AGATATACAT 
GCAGAAGAGA AAAAGGCTAT CTGCAGGGAA GCTGCCAAGG TGGTAAAGGA TGGGGACCTT 
ATATTTCTTG ATTCAGGTAC AACACCGCTT TATCTGATAC CTTATATTCA GAATAAAAAA 
ATAAAGATCG TAACGAATTG TTATCTTACT TTGGCAAGAT TACAGGGATG CGATGCACAG 
ATATATATGT TGGGAGGATT ATATATACCT AAATATGAAG TATGTTCGGG ACCAAGCACA 
ATAGAGCAGT TAAAGCAGTT TAGATTTGAC CATGCTTTTA TTGGTGCTAA CGGTATTGAT 
CTGGAGCTTG GCGAAGTATA TTCAAGTGAA TTTGAAATAG GTGCCCTGAA AAAGGCGGTT 
ATGAAAAGAA GCAAAGATTC TTATTTACTT GTAGATGATT CGAAATTTTC ACTTGCAGGT 
ATCTGTACCT TTGGATACTT CTCTGAATTT ACCCATATTT ATGTAAATGA TTTTCCTAAA 
AATGAAAAAA GAAGCAAGAA CATCATTATA TGCAAATAA 

 

Protein sequence

MLAKERLLYI IKRLQAQPSI SVADLCKELQ VSKSTIQRDL KILEDEGKIS RERGGAVQKN 
LDEIMSDLTE IPVIEKVDIH AEEKKAICRE AAKVVKDGDL IFLDSGTTPL YLIPYIQNKK 
IKIVTNCYLT LARLQGCDAQ IYMLGGLYIP KYEVCSGPST IEQLKQFRFD HAFIGANGID 
LELGEVYSSE FEIGALKKAV MKRSKDSYLL VDDSKFSLAG ICTFGYFSEF THIYVNDFPK 
NEKRSKNIII CK