Gene Sterm_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3007 
Symbol 
ID8598461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3148077 
End bp3148880 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content41% 
IMG OID 
Productphosphotransferase system PTS sorbose-specific IIC subunit 
Protein accessionYP_003309780 
Protein GI269121603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.22558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATAC AGGCAGTTTT AATCGGAATA TTTTGTTATC TGGGGGCGCT GAGCGTACCT 
TGGGCATTTG GTCTTACAGG AGGATGGTAT ACATTATCAA GACCTTTGGT ATCAGGATTA
ATCGTAGGAA TGATTCTGGG AGATGTAAAA ACGGGAATAA TAGTAGGAGT GGCAGTGCAG
GCTGTATATA TAGCACTCGT AACTCCGGGC GGAACAATGC CTTCTGATCT GAATTTTGTG
GCTTATCCGG CAATAGCCCT TGGAATTATG TCCGGAAAGG ATCCGCAGGT AGCTGTGACC
CTTGCTGCAA CAATAGGAAT ATTAGGAACA GTAATATTTA ATTTTATGAT GGTACTAAAT
TCATACTGGA ATAATAAGGC AGATAAAGCG GTGCAGGCCG GGGACATAAG GGGAGTAAGG
CTGGCAAACG GATTATATCC TCAGATCACG ACTTTTCTTA TGAGATTTAT ACCGTCGTTT
ATAGCTGTTT ATCTTGGCGG GCAGTATATA CAGACAATAC TGGATCATAT TCCGGATAAA
GTAATAACAA TGATGACTGT ACTCGGCGGA ATGCTTCCGG CAGTGGGAAT AGCAATTCTT
CTAAAGCAGA TAGTAAAGAG AAACGATCTG CTGGTTTATT TCTTGGTAGG ATTCATAGGA
ATCATATTCC TGAATCTGAA TATGATAGCA TTGGCAATGA TAGGAGTATT GCTCGCATTG
ATACATTTCA ACTATAGACC GTCAGCTGTA CAGGGAGGAA ATAATAACGG AACACAAAAT
GACGATGAGG AGGATGAATT CTAA
 
Protein sequence
MFIQAVLIGI FCYLGALSVP WAFGLTGGWY TLSRPLVSGL IVGMILGDVK TGIIVGVAVQ 
AVYIALVTPG GTMPSDLNFV AYPAIALGIM SGKDPQVAVT LAATIGILGT VIFNFMMVLN
SYWNNKADKA VQAGDIRGVR LANGLYPQIT TFLMRFIPSF IAVYLGGQYI QTILDHIPDK
VITMMTVLGG MLPAVGIAIL LKQIVKRNDL LVYFLVGFIG IIFLNLNMIA LAMIGVLLAL
IHFNYRPSAV QGGNNNGTQN DDEEDEF