Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3007 |
Symbol | |
ID | 8598461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3148077 |
End bp | 3148880 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | phosphotransferase system PTS sorbose-specific IIC subunit |
Protein accession | YP_003309780 |
Protein GI | 269121603 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.22558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTATAC AGGCAGTTTT AATCGGAATA TTTTGTTATC TGGGGGCGCT GAGCGTACCT TGGGCATTTG GTCTTACAGG AGGATGGTAT ACATTATCAA GACCTTTGGT ATCAGGATTA ATCGTAGGAA TGATTCTGGG AGATGTAAAA ACGGGAATAA TAGTAGGAGT GGCAGTGCAG GCTGTATATA TAGCACTCGT AACTCCGGGC GGAACAATGC CTTCTGATCT GAATTTTGTG GCTTATCCGG CAATAGCCCT TGGAATTATG TCCGGAAAGG ATCCGCAGGT AGCTGTGACC CTTGCTGCAA CAATAGGAAT ATTAGGAACA GTAATATTTA ATTTTATGAT GGTACTAAAT TCATACTGGA ATAATAAGGC AGATAAAGCG GTGCAGGCCG GGGACATAAG GGGAGTAAGG CTGGCAAACG GATTATATCC TCAGATCACG ACTTTTCTTA TGAGATTTAT ACCGTCGTTT ATAGCTGTTT ATCTTGGCGG GCAGTATATA CAGACAATAC TGGATCATAT TCCGGATAAA GTAATAACAA TGATGACTGT ACTCGGCGGA ATGCTTCCGG CAGTGGGAAT AGCAATTCTT CTAAAGCAGA TAGTAAAGAG AAACGATCTG CTGGTTTATT TCTTGGTAGG ATTCATAGGA ATCATATTCC TGAATCTGAA TATGATAGCA TTGGCAATGA TAGGAGTATT GCTCGCATTG ATACATTTCA ACTATAGACC GTCAGCTGTA CAGGGAGGAA ATAATAACGG AACACAAAAT GACGATGAGG AGGATGAATT CTAA
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Protein sequence | MFIQAVLIGI FCYLGALSVP WAFGLTGGWY TLSRPLVSGL IVGMILGDVK TGIIVGVAVQ AVYIALVTPG GTMPSDLNFV AYPAIALGIM SGKDPQVAVT LAATIGILGT VIFNFMMVLN SYWNNKADKA VQAGDIRGVR LANGLYPQIT TFLMRFIPSF IAVYLGGQYI QTILDHIPDK VITMMTVLGG MLPAVGIAIL LKQIVKRNDL LVYFLVGFIG IIFLNLNMIA LAMIGVLLAL IHFNYRPSAV QGGNNNGTQN DDEEDEF
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