Gene Sterm_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3004 
Symbol 
ID8599654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3145620 
End bp3146378 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content34% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003309777 
Protein GI269121600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000311693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG AAGTTGATAA AAATTCTGAT GAAAAGCTTT ATAAACAAGT AGAGAATATA 
TTGCTTGAGC TTATAAATGA GGAACCTTAC AGTAAGGGTT TTTACCTGCC GAACGAACTT
GAGCTGATGA AAAGGCTGAA TGTAAGCAGA CATACAGTAA GAAAGGCTAT GGACAGCCTT
GTTTTACGCG GACTTATTAT ACGTGAAAAA GGCAGAGGGA CAAAGGTTAA TCTTGACAGA
AAGAAAGTAA AAACGACTTT GAACTCATGG CATAGTTTTA CAGATGAAAT GTTTTCCCAA
GGGTCTGAAT TAAAACATAT AAATAAAAAG ATAGTAATGG AAGATTTTCC TGATGAGATA
AAGGACATTT TTGGTCTTGA CAGGAATAAA GAATATAACG GTCCTGTACT ATACAGGGAA
AGCGGTATAA ACGACAGCAT AGATATATAC TTTCAGAGTT ATTTTAATCC TGGAATAAAT
CTGGATAAAG ATGAGGATTT TATAAACGGT AGCTTTACAA AGCTTTATGA TTATCTTGAA
AAGAATTACG GGATTTTTAC AGTAGTGTCT GATGAAGAAG TAACTGCAAT GATGCCTACG
GAGGAACTGA AGGAGATACT TGATATTAAT GATAAAATTC CGGTATTATG CAGAAAAAGA
CTTGTTTATG ACAAGTTCGG GCAGAAAATA GAATATAATA TAGGGTATTA CAGAGCTGAC
AGATTTGTGT ATAATATAAG TCTGAAACGG GAAGTATAG
 
Protein sequence
MRKEVDKNSD EKLYKQVENI LLELINEEPY SKGFYLPNEL ELMKRLNVSR HTVRKAMDSL 
VLRGLIIREK GRGTKVNLDR KKVKTTLNSW HSFTDEMFSQ GSELKHINKK IVMEDFPDEI
KDIFGLDRNK EYNGPVLYRE SGINDSIDIY FQSYFNPGIN LDKDEDFING SFTKLYDYLE
KNYGIFTVVS DEEVTAMMPT EELKEILDIN DKIPVLCRKR LVYDKFGQKI EYNIGYYRAD
RFVYNISLKR EV