Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3004 |
Symbol | |
ID | 8599654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3145620 |
End bp | 3146378 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003309777 |
Protein GI | 269121600 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000311693 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAG AAGTTGATAA AAATTCTGAT GAAAAGCTTT ATAAACAAGT AGAGAATATA TTGCTTGAGC TTATAAATGA GGAACCTTAC AGTAAGGGTT TTTACCTGCC GAACGAACTT GAGCTGATGA AAAGGCTGAA TGTAAGCAGA CATACAGTAA GAAAGGCTAT GGACAGCCTT GTTTTACGCG GACTTATTAT ACGTGAAAAA GGCAGAGGGA CAAAGGTTAA TCTTGACAGA AAGAAAGTAA AAACGACTTT GAACTCATGG CATAGTTTTA CAGATGAAAT GTTTTCCCAA GGGTCTGAAT TAAAACATAT AAATAAAAAG ATAGTAATGG AAGATTTTCC TGATGAGATA AAGGACATTT TTGGTCTTGA CAGGAATAAA GAATATAACG GTCCTGTACT ATACAGGGAA AGCGGTATAA ACGACAGCAT AGATATATAC TTTCAGAGTT ATTTTAATCC TGGAATAAAT CTGGATAAAG ATGAGGATTT TATAAACGGT AGCTTTACAA AGCTTTATGA TTATCTTGAA AAGAATTACG GGATTTTTAC AGTAGTGTCT GATGAAGAAG TAACTGCAAT GATGCCTACG GAGGAACTGA AGGAGATACT TGATATTAAT GATAAAATTC CGGTATTATG CAGAAAAAGA CTTGTTTATG ACAAGTTCGG GCAGAAAATA GAATATAATA TAGGGTATTA CAGAGCTGAC AGATTTGTGT ATAATATAAG TCTGAAACGG GAAGTATAG
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Protein sequence | MRKEVDKNSD EKLYKQVENI LLELINEEPY SKGFYLPNEL ELMKRLNVSR HTVRKAMDSL VLRGLIIREK GRGTKVNLDR KKVKTTLNSW HSFTDEMFSQ GSELKHINKK IVMEDFPDEI KDIFGLDRNK EYNGPVLYRE SGINDSIDIY FQSYFNPGIN LDKDEDFING SFTKLYDYLE KNYGIFTVVS DEEVTAMMPT EELKEILDIN DKIPVLCRKR LVYDKFGQKI EYNIGYYRAD RFVYNISLKR EV
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