Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2996 |
Symbol | |
ID | 8598451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3138861 |
End bp | 3140162 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | PTS system, lactose/cellobiose family IIC subunit |
Protein accession | YP_003309770 |
Protein GI | 269121593 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00652008 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAAG TATTAGAAAG ATTTGCGGAA AAAATGATGC CTGTGGCAAA TGCAATAGGG AGCCAGAGGC ACATGCAGGC AGTAAGAAAC GGACTTATTT CTATATTGCC GCTTACAATT GTCGGTTCAT TTTTTGTAAT ATTGCTGAAT ATTCCGATAA ACGGATATGC AGAGTTAATA GCTCCTTATA AAGACGCACT GGATATTCCT TTTCGTTTTA CAGTGGGAAT AATGTCTTTA TACAGTGCAT TTACCATAGG ATCTTTTCTT GGAAAAAGCT ATAAGCTTGA TGATGTAACA AGCGGTTTTC TGGCTATGCT GGCTACTATA CTTATGATAG TACCTGTAAA TATAAAAGAA GGTGTGACTA CTGCAGGAAC AACAGTTTCA GGGAGATACA TTCCTATAGC TCCGCTCAGC TCACAGGGTC TTTTCGGTGC TATAGTGGCT TCACTTATAG CAGTGGAAAT TTATCGTTTT GTAAAAGAAA AGAAGATAGA AATAAAGATG CCTGACGGAG TACCGCCTGT AGTGGCAAGT TCGTTCGCAG CTTTATTTCC AACGCTTATT ATAATAATAT TATTTTGGAT ACCTCGTCAT TTTTTCGGAT TTGATCTGAA TGGTATCATA TCATTTGCAA TTTCTCCGTT AAAGGTATTT TTAACAGGGA ATAATCTTAT CGGCGGAGTT TTAACACAAT TTTTCATATG CTTATTCTGG ATTTTCGGTA TACACGGTCA TGCAGTTTTG GGTCCAATAA TCAGACCATT CTGGGATCAG GCGATAATAC AGAATATGGA ATTATTCCAG GCAGGAATAA GTGCTTATCA GCTTCCGAAC ATATTTACAG AACAGTTTTT TCAATGGTAT GCACAGATGG GAGGAACAGG AGGAACTCTG GCACTGGTAG TACTTTTTAT GACATCAAAA TCACAGTATC TGAAACAGCT TGGAAAGCTT TCTATACTTC CCGGAATTTT TAATATAAAC GAGCCGATGA TATTCGGAGC ACCCATAGTA ATGAATCCTC TTCTGGCAGT GCCGTTTATG CTGGTTCCTG TGGTTAACAC TATTATTGTA TATATTTTTA CTGCTTTAAA CATTATACCC AGAATGATGG TAAAACCTCC CTTTACAGTG CCGGCACCAT TAGGAGCACT GATAACGACA AACTGGAACT GGATGGCATG CGTTCTTGTT TTTATATGCT TTTTTGTATC ACTTGCCATA TATTATCCCT TTTTCAAGCT GTTTGAAAAG AGAACTCTGG ACAATGAAAA TGTACAGTCT GTCGGAGAAT AA
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Protein sequence | MEKVLERFAE KMMPVANAIG SQRHMQAVRN GLISILPLTI VGSFFVILLN IPINGYAELI APYKDALDIP FRFTVGIMSL YSAFTIGSFL GKSYKLDDVT SGFLAMLATI LMIVPVNIKE GVTTAGTTVS GRYIPIAPLS SQGLFGAIVA SLIAVEIYRF VKEKKIEIKM PDGVPPVVAS SFAALFPTLI IIILFWIPRH FFGFDLNGII SFAISPLKVF LTGNNLIGGV LTQFFICLFW IFGIHGHAVL GPIIRPFWDQ AIIQNMELFQ AGISAYQLPN IFTEQFFQWY AQMGGTGGTL ALVVLFMTSK SQYLKQLGKL SILPGIFNIN EPMIFGAPIV MNPLLAVPFM LVPVVNTIIV YIFTALNIIP RMMVKPPFTV PAPLGALITT NWNWMACVLV FICFFVSLAI YYPFFKLFEK RTLDNENVQS VGE
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