Gene Sterm_2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_2949 
Symbol 
ID8598404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3091371 
End bp3094817 
Gene Length3447 bp 
Protein Length1148 aa 
Translation table11 
GC content37% 
IMG OID 
ProductDNA-directed RNA polymerase, beta subunit 
Protein accessionYP_003309723 
Protein GI269121546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGAC TTATTAAAAG ATTTAGTTTT GGAAAAATTG TTGACAGAGG AGAAATGCCT 
CACTTTTTGG AGTTTCAGTT AAATTCATAT GAAGACTTCA TACAGGCAGG AATCCCGCCG
CAAAAAAGAG AAAACCAAGG TTTAGAAAAT ATTTTTCAGG AAATTTTTCC AATAGAATCG
AGTAATGGTC AACTTAAATT AGAGTATATA TGGTATGAGA TTCATGAAAA TGATAAACCG
CTTAATGATG AATTGGAATG TAAAAAAAGA AGAAAAACGT ATGCCGGTCA GCTAAAAGTA
AGATTACGTT TAATAAATCT GAAGACAGAA GAAATTCAGG AAACTTTGGT ATATTTTGGA
GAAATTCCGT TAATGACTGA TAAAGCCACG TTTATAATAA ACGGAGCAGA AAGGGTCGTA
GTATCTCAGC TGCACAGATC GCCAGGTGTT ACATTTAATA AAGAGTTGAG CATACAAACT
GGAAAAGATA TATTTATTGG GAAAATAATC CCGTATAAAG GGACTTGGCT GGAATTTGAA
ACTGACAAGA ATGATATATT AAATGTGAAA ATAGACAGAA GAAAGAAAGT TTTATCAACT
ATATTCTTAA AGTCAGTTGA CTTTTTCACG AATAACAGGG AGATAATGGA TCAGTTTTTT
GAATCAAAAG AACTGGAGCT AAATAAACTA TATGAAAAAT ACAAAGGTGA TGATTTACAG
GAAGTAATAA AAAACAGACT GGAAGGAAGC TTTAACAAAG AAGACATTCT TGACGAGAAA
ACAGGAGAAT TCGTTCTGGA ATCAGAAGAA TTAATTGATG AGATCGGAAT AGAAAAATTA
ATTGAGAATA AAGTTGAAAA AATTTATTAC TGGGAAGTAA AGCCGGAAGA CAGAATTATT
GCGAATTCAC TAATTCATGA CCATACTAAG ACATCTGACG AAGCGGTCGT AGAAGTTTTT
AAGAAACTGA GACCCGGGGA TCTGGTTACA GTAGACAGTG CAAGATCACT CTTAAAACAG
ATGTTCTTTA ATCCTCAGAG ATACGATCTT GCTAATGTAG GAAGATACAA AATAAATAAA
AGGCTGAAGC TTGATCTTCC GGAAAATGAG ATCACACTGA CTAAAGAAGA TGTTATGCAG
ACTATTAACT ATGTCAGAAA CCTTTATAAT GACGACGGAT ATACTGATGA TATAGATAAT
CTGTCAAACA GAAGGGTAAG AGGAGTAGGA GAATTACTGG CCATTCAGGT AAAAGGCGGA
ATGATGAAAA TGGCTAAGAT GGTTAAAGAG AAAATGACAA TACAGGACAT TACTACTCTG
ACACCGCAGA GTCTTTTGAA TACGAAGCCT CTGAATGCTT TGATTCTGGA GTTCTTTGGA
AGCGGACAGC TTTCTCAGTT TATGGATCAG TCGAATCCTC TTGCAGAATT AACTCACAAA
AGAAGAATAT CAGCATTGGG ACCAGGTGGA CTTTCCAGAG AAAGAGCAGG ATTCGAGGTG
CGTGATGTAC ATAACTCGCA TTATGGAAGA ATCTGTCCTA TAGAAACGCC GGAAGGACCA
AATATCGGAC TGATAGGTTC ATTAGCAACT TATGGGAAGG TTAATAAATA TGGCTTTATA
GAAACACCAT TTGCAAAAGT GGAAAATGGT AAGGCACTTC TTGATAAAGT AAACTATCTT
GGTGCAGATG AAGAAGAAGG ATTATTTATA GCCCAGGCAG ATACACCTGT CGATGAAAAA
GGAAATATCC TTGTAGAAGA GGTAGTCTGC AGATATGGTG AAGAAATAGT TCATATTGTA
AAAGAGAAGG TTCATTATCT GGATGTCTCG CCTAAACAGG TAGTATCAGT TTCAGCAGGA
TTAATTCCGT TTCTGGAACA CGATGATGCC AACAGAGCAC TAATGGGATC GAATATGCAG
CGTCAGGCGG TACCATTATT AAGAACAGAG GCTCCTTATG TAGGGACAGG ACTAGAAAGA
AAAGTGGCAG TAGACTCAGG AGCAGTAATG ACATCAAAAG CAAATGGAAG AGTAACTTCT
GTGGATGCAA AACAAATTAT AGTAACAGAT GAAAATAATA AGGAACACGT TCATAGATTA
TTAAACTTTG AAAGATCAAA CCAAGCAATG TGTTTACACC AAAAGCCTAT TATAAACCTT
GATGATGAAG TAAAAAGAGG AGATATAATT GCTGACGGAC CATCAACTGC AGGTGGAGAT
CTTGCACTTG GAAGAAATAT ACTTCTGGCT TTCATGCCTT GGGAAGGGTA TAATTTTGAG
GATGCGATTT TGATATCTGA AAGACTTAGA AAAGATGATG TATTTACTTC AATTCATATA
GAAGAATTTG ATATAGAAGC AAGAACTACA AAGCTGGGAG ATGAAGAAAT AACAAGAGAA
ATCCCGAATG TTTCTGAGGA AACACTTAAA AACCTTGATG AAAGTGGTAT TATAAGAATA
GGTGCACAAG TGAATCCGGG AGATATTCTT GTAGGGAAAG TAACACCAAA AGGTGAAACA
GAACCGCCGG CAGAGGAAAA ATTATTAAGA GCTATATTTG GAGAAAAGGC TAAGGATGTA
AGAGATACAT CGTTAAGACT TCCGCACGGG ACAAAAGGTA CAGTAGTAGA TGTTCTTGTA
CTGACTAAAG ATGACGGAGA TGATTTAAAA GCCGGAGTAA ACAAAGTAGT AAGAGTTTAT
ATAGCTGAAA AAAGAAAAAT AACTGTCGGG GATAAAATGT CAGGAAGACA TGGAAATAAA
GGTGTTGTTT CTAGAATACT TCCTGTGGAG GATATGCCTC ACCTTGAAGA CGGGACGCCG
ATTGATGTGG CAGTTAATCC GTTAGGGGTA CCATCACGTA TGAATATCGG ACAGGTATTG
GAGGTCCATT TGGGTCTGGC AATCGGAAAT ATTGATCAGT ATATAGCCAC ACCTGTTTTT
GACGGTGCCA GTGAAAATGA CGTAAAAGAT TATCTGGAAA AAGTAGGATT TGAAAGAAAC
GGAAAAGTAA AACTGATAGA CGGAAGAACA GGGGAGCCAT TTGATAATCC TGTTACTGTA
GGAAGAATGT ACATGTTAAA GCTGCATCAC CTTGTAGAAG ATAAAATGCA TGCAAGAGCA
ATAGGACCAT ACTCGCTGGT AACACAGCAG CCTCTCGGAG GAAAAGCACA ATTCGGTGGG
CAAAGACTTG GAGAGATGGA AGTTTGGGCT CTGGAAGCAT ATGGAGCATC CAATATCCTT
CAGGAAATGT TAACGGTAAA ATCTGATGAT ATAAGTGGTA GAACAAAAAC TTATGAAGCA
ATAGTAAAAG GTCAGGGAAT GCCTGAAGCC GATGCACCGG AATCATTTAA AGTTTTAATA
AAAGAGTTTC AATCATTAGG ATTAGACATA AATTTATTTG ATAAAGATGG TCAAGTGATA
GAATTAGATA AAAATAATGA AAATTAA
 
Protein sequence
MSRLIKRFSF GKIVDRGEMP HFLEFQLNSY EDFIQAGIPP QKRENQGLEN IFQEIFPIES 
SNGQLKLEYI WYEIHENDKP LNDELECKKR RKTYAGQLKV RLRLINLKTE EIQETLVYFG
EIPLMTDKAT FIINGAERVV VSQLHRSPGV TFNKELSIQT GKDIFIGKII PYKGTWLEFE
TDKNDILNVK IDRRKKVLST IFLKSVDFFT NNREIMDQFF ESKELELNKL YEKYKGDDLQ
EVIKNRLEGS FNKEDILDEK TGEFVLESEE LIDEIGIEKL IENKVEKIYY WEVKPEDRII
ANSLIHDHTK TSDEAVVEVF KKLRPGDLVT VDSARSLLKQ MFFNPQRYDL ANVGRYKINK
RLKLDLPENE ITLTKEDVMQ TINYVRNLYN DDGYTDDIDN LSNRRVRGVG ELLAIQVKGG
MMKMAKMVKE KMTIQDITTL TPQSLLNTKP LNALILEFFG SGQLSQFMDQ SNPLAELTHK
RRISALGPGG LSRERAGFEV RDVHNSHYGR ICPIETPEGP NIGLIGSLAT YGKVNKYGFI
ETPFAKVENG KALLDKVNYL GADEEEGLFI AQADTPVDEK GNILVEEVVC RYGEEIVHIV
KEKVHYLDVS PKQVVSVSAG LIPFLEHDDA NRALMGSNMQ RQAVPLLRTE APYVGTGLER
KVAVDSGAVM TSKANGRVTS VDAKQIIVTD ENNKEHVHRL LNFERSNQAM CLHQKPIINL
DDEVKRGDII ADGPSTAGGD LALGRNILLA FMPWEGYNFE DAILISERLR KDDVFTSIHI
EEFDIEARTT KLGDEEITRE IPNVSEETLK NLDESGIIRI GAQVNPGDIL VGKVTPKGET
EPPAEEKLLR AIFGEKAKDV RDTSLRLPHG TKGTVVDVLV LTKDDGDDLK AGVNKVVRVY
IAEKRKITVG DKMSGRHGNK GVVSRILPVE DMPHLEDGTP IDVAVNPLGV PSRMNIGQVL
EVHLGLAIGN IDQYIATPVF DGASENDVKD YLEKVGFERN GKVKLIDGRT GEPFDNPVTV
GRMYMLKLHH LVEDKMHARA IGPYSLVTQQ PLGGKAQFGG QRLGEMEVWA LEAYGASNIL
QEMLTVKSDD ISGRTKTYEA IVKGQGMPEA DAPESFKVLI KEFQSLGLDI NLFDKDGQVI
ELDKNNEN