Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2949 |
Symbol | |
ID | 8598404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3091371 |
End bp | 3094817 |
Gene Length | 3447 bp |
Protein Length | 1148 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | DNA-directed RNA polymerase, beta subunit |
Protein accession | YP_003309723 |
Protein GI | 269121546 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAGAC TTATTAAAAG ATTTAGTTTT GGAAAAATTG TTGACAGAGG AGAAATGCCT CACTTTTTGG AGTTTCAGTT AAATTCATAT GAAGACTTCA TACAGGCAGG AATCCCGCCG CAAAAAAGAG AAAACCAAGG TTTAGAAAAT ATTTTTCAGG AAATTTTTCC AATAGAATCG AGTAATGGTC AACTTAAATT AGAGTATATA TGGTATGAGA TTCATGAAAA TGATAAACCG CTTAATGATG AATTGGAATG TAAAAAAAGA AGAAAAACGT ATGCCGGTCA GCTAAAAGTA AGATTACGTT TAATAAATCT GAAGACAGAA GAAATTCAGG AAACTTTGGT ATATTTTGGA GAAATTCCGT TAATGACTGA TAAAGCCACG TTTATAATAA ACGGAGCAGA AAGGGTCGTA GTATCTCAGC TGCACAGATC GCCAGGTGTT ACATTTAATA AAGAGTTGAG CATACAAACT GGAAAAGATA TATTTATTGG GAAAATAATC CCGTATAAAG GGACTTGGCT GGAATTTGAA ACTGACAAGA ATGATATATT AAATGTGAAA ATAGACAGAA GAAAGAAAGT TTTATCAACT ATATTCTTAA AGTCAGTTGA CTTTTTCACG AATAACAGGG AGATAATGGA TCAGTTTTTT GAATCAAAAG AACTGGAGCT AAATAAACTA TATGAAAAAT ACAAAGGTGA TGATTTACAG GAAGTAATAA AAAACAGACT GGAAGGAAGC TTTAACAAAG AAGACATTCT TGACGAGAAA ACAGGAGAAT TCGTTCTGGA ATCAGAAGAA TTAATTGATG AGATCGGAAT AGAAAAATTA ATTGAGAATA AAGTTGAAAA AATTTATTAC TGGGAAGTAA AGCCGGAAGA CAGAATTATT GCGAATTCAC TAATTCATGA CCATACTAAG ACATCTGACG AAGCGGTCGT AGAAGTTTTT AAGAAACTGA GACCCGGGGA TCTGGTTACA GTAGACAGTG CAAGATCACT CTTAAAACAG ATGTTCTTTA ATCCTCAGAG ATACGATCTT GCTAATGTAG GAAGATACAA AATAAATAAA AGGCTGAAGC TTGATCTTCC GGAAAATGAG ATCACACTGA CTAAAGAAGA TGTTATGCAG ACTATTAACT ATGTCAGAAA CCTTTATAAT GACGACGGAT ATACTGATGA TATAGATAAT CTGTCAAACA GAAGGGTAAG AGGAGTAGGA GAATTACTGG CCATTCAGGT AAAAGGCGGA ATGATGAAAA TGGCTAAGAT GGTTAAAGAG AAAATGACAA TACAGGACAT TACTACTCTG ACACCGCAGA GTCTTTTGAA TACGAAGCCT CTGAATGCTT TGATTCTGGA GTTCTTTGGA AGCGGACAGC TTTCTCAGTT TATGGATCAG TCGAATCCTC TTGCAGAATT AACTCACAAA AGAAGAATAT CAGCATTGGG ACCAGGTGGA CTTTCCAGAG AAAGAGCAGG ATTCGAGGTG CGTGATGTAC ATAACTCGCA TTATGGAAGA ATCTGTCCTA TAGAAACGCC GGAAGGACCA AATATCGGAC TGATAGGTTC ATTAGCAACT TATGGGAAGG TTAATAAATA TGGCTTTATA GAAACACCAT TTGCAAAAGT GGAAAATGGT AAGGCACTTC TTGATAAAGT AAACTATCTT GGTGCAGATG AAGAAGAAGG ATTATTTATA GCCCAGGCAG ATACACCTGT CGATGAAAAA GGAAATATCC TTGTAGAAGA GGTAGTCTGC AGATATGGTG AAGAAATAGT TCATATTGTA AAAGAGAAGG TTCATTATCT GGATGTCTCG CCTAAACAGG TAGTATCAGT TTCAGCAGGA TTAATTCCGT TTCTGGAACA CGATGATGCC AACAGAGCAC TAATGGGATC GAATATGCAG CGTCAGGCGG TACCATTATT AAGAACAGAG GCTCCTTATG TAGGGACAGG ACTAGAAAGA AAAGTGGCAG TAGACTCAGG AGCAGTAATG ACATCAAAAG CAAATGGAAG AGTAACTTCT GTGGATGCAA AACAAATTAT AGTAACAGAT GAAAATAATA AGGAACACGT TCATAGATTA TTAAACTTTG AAAGATCAAA CCAAGCAATG TGTTTACACC AAAAGCCTAT TATAAACCTT GATGATGAAG TAAAAAGAGG AGATATAATT GCTGACGGAC CATCAACTGC AGGTGGAGAT CTTGCACTTG GAAGAAATAT ACTTCTGGCT TTCATGCCTT GGGAAGGGTA TAATTTTGAG GATGCGATTT TGATATCTGA AAGACTTAGA AAAGATGATG TATTTACTTC AATTCATATA GAAGAATTTG ATATAGAAGC AAGAACTACA AAGCTGGGAG ATGAAGAAAT AACAAGAGAA ATCCCGAATG TTTCTGAGGA AACACTTAAA AACCTTGATG AAAGTGGTAT TATAAGAATA GGTGCACAAG TGAATCCGGG AGATATTCTT GTAGGGAAAG TAACACCAAA AGGTGAAACA GAACCGCCGG CAGAGGAAAA ATTATTAAGA GCTATATTTG GAGAAAAGGC TAAGGATGTA AGAGATACAT CGTTAAGACT TCCGCACGGG ACAAAAGGTA CAGTAGTAGA TGTTCTTGTA CTGACTAAAG ATGACGGAGA TGATTTAAAA GCCGGAGTAA ACAAAGTAGT AAGAGTTTAT ATAGCTGAAA AAAGAAAAAT AACTGTCGGG GATAAAATGT CAGGAAGACA TGGAAATAAA GGTGTTGTTT CTAGAATACT TCCTGTGGAG GATATGCCTC ACCTTGAAGA CGGGACGCCG ATTGATGTGG CAGTTAATCC GTTAGGGGTA CCATCACGTA TGAATATCGG ACAGGTATTG GAGGTCCATT TGGGTCTGGC AATCGGAAAT ATTGATCAGT ATATAGCCAC ACCTGTTTTT GACGGTGCCA GTGAAAATGA CGTAAAAGAT TATCTGGAAA AAGTAGGATT TGAAAGAAAC GGAAAAGTAA AACTGATAGA CGGAAGAACA GGGGAGCCAT TTGATAATCC TGTTACTGTA GGAAGAATGT ACATGTTAAA GCTGCATCAC CTTGTAGAAG ATAAAATGCA TGCAAGAGCA ATAGGACCAT ACTCGCTGGT AACACAGCAG CCTCTCGGAG GAAAAGCACA ATTCGGTGGG CAAAGACTTG GAGAGATGGA AGTTTGGGCT CTGGAAGCAT ATGGAGCATC CAATATCCTT CAGGAAATGT TAACGGTAAA ATCTGATGAT ATAAGTGGTA GAACAAAAAC TTATGAAGCA ATAGTAAAAG GTCAGGGAAT GCCTGAAGCC GATGCACCGG AATCATTTAA AGTTTTAATA AAAGAGTTTC AATCATTAGG ATTAGACATA AATTTATTTG ATAAAGATGG TCAAGTGATA GAATTAGATA AAAATAATGA AAATTAA
|
Protein sequence | MSRLIKRFSF GKIVDRGEMP HFLEFQLNSY EDFIQAGIPP QKRENQGLEN IFQEIFPIES SNGQLKLEYI WYEIHENDKP LNDELECKKR RKTYAGQLKV RLRLINLKTE EIQETLVYFG EIPLMTDKAT FIINGAERVV VSQLHRSPGV TFNKELSIQT GKDIFIGKII PYKGTWLEFE TDKNDILNVK IDRRKKVLST IFLKSVDFFT NNREIMDQFF ESKELELNKL YEKYKGDDLQ EVIKNRLEGS FNKEDILDEK TGEFVLESEE LIDEIGIEKL IENKVEKIYY WEVKPEDRII ANSLIHDHTK TSDEAVVEVF KKLRPGDLVT VDSARSLLKQ MFFNPQRYDL ANVGRYKINK RLKLDLPENE ITLTKEDVMQ TINYVRNLYN DDGYTDDIDN LSNRRVRGVG ELLAIQVKGG MMKMAKMVKE KMTIQDITTL TPQSLLNTKP LNALILEFFG SGQLSQFMDQ SNPLAELTHK RRISALGPGG LSRERAGFEV RDVHNSHYGR ICPIETPEGP NIGLIGSLAT YGKVNKYGFI ETPFAKVENG KALLDKVNYL GADEEEGLFI AQADTPVDEK GNILVEEVVC RYGEEIVHIV KEKVHYLDVS PKQVVSVSAG LIPFLEHDDA NRALMGSNMQ RQAVPLLRTE APYVGTGLER KVAVDSGAVM TSKANGRVTS VDAKQIIVTD ENNKEHVHRL LNFERSNQAM CLHQKPIINL DDEVKRGDII ADGPSTAGGD LALGRNILLA FMPWEGYNFE DAILISERLR KDDVFTSIHI EEFDIEARTT KLGDEEITRE IPNVSEETLK NLDESGIIRI GAQVNPGDIL VGKVTPKGET EPPAEEKLLR AIFGEKAKDV RDTSLRLPHG TKGTVVDVLV LTKDDGDDLK AGVNKVVRVY IAEKRKITVG DKMSGRHGNK GVVSRILPVE DMPHLEDGTP IDVAVNPLGV PSRMNIGQVL EVHLGLAIGN IDQYIATPVF DGASENDVKD YLEKVGFERN GKVKLIDGRT GEPFDNPVTV GRMYMLKLHH LVEDKMHARA IGPYSLVTQQ PLGGKAQFGG QRLGEMEVWA LEAYGASNIL QEMLTVKSDD ISGRTKTYEA IVKGQGMPEA DAPESFKVLI KEFQSLGLDI NLFDKDGQVI ELDKNNEN
|
| |