| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_2948 |
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| Symbol | |
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| ID | 8598403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sebaldella termitidis ATCC 33386 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013517 |
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| Strand | - |
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| Start bp | 3087390 |
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| End bp | 3091343 |
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| Gene Length | 3954 bp |
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| Protein Length | 1317 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_003309722 |
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| Protein GI | 269121545 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATAA GAGATTTTGA TAGTATACAG ATAAAGCTTG CTTCACCGGA TAAGATCAGA
GAATGGTCTT ATGGTGAGGT GAAGAAGGCT GAAACAATAA ACTACAGGAC ATTGAAGCCT
GAAATGGACG GTTTATTCTG TGAGAGAATA TTCGGTCCTG CGAAGGATTT TGAATGTGCC
TGCGGTAAGT ACAAGCGTAT GAGATACAAA GGAATAAAAT GTGAAAAGTG CGGGGTTGAA
GTAACTACTT CAAAAGTAAG ACGTGAAAGA ATGGGACATA TAGATTTGGC AGCTCCTGTA
GCACATATAT GGTATTCAAA AGGAACGCCT AATAAAATGA GTCTTCTTTT GGGACTTAGT
ACTAAAGAAC TAGAATCAGT ATTATATTTT GCAAGATATG TAGTAACTGA ACCTGGAGAA
ACTAATCTTG AAAAAGGCGT AATACTTACA GACAGAGAGT ACAGACTTTA TAAAAGCCAG
TTTGGTGAAA AGTTTGAAGC TAAAATGGGT GCAGAAGGAA TAATAAAGCT GCTGGAAGAA
ATAGATCTTG CACGGCTTGA AGAGGAACTG AAAAATGAAC TTGAAGTTTC ACAGTCAAGC
CAGAAGAGAA AAAAGGTAGT AAAAAGACTA AAAATAGTAA GAGATTTCAT TATGTCCGAA
AACAGACCAG AATGGATGAT ACTTACAGTA TTACCTGTAA TTCCTGCTGA TATAAGACCT
ATGGTACAGC TTGACGGCGG AAGATTCGCA ACAAGTGATC TTAATGATCT TTACAGAAGA
GTAATAAACA GAAATACAAG ATTAAAAAAA TTAATATCAA TAAATGCTCC AGAAATAGTA
ATAAAAAATG AAAAAAGAAT GCTTCAGGAA GCTGTAGATG CCTTAATAGA TAACGGAAGA
AGAGGAAAGC CGGTAGTTAC TCAGAATAAC AGAGAGCTGA AATCTCTTTC AGATATGCTT
AAAGGTAAAA ACGGAAGATT CAGACAGAAC CTTCTTGGTA AACGGGTAGA TTACTCAGGA
AGATCAGTTA TTGTCGTTGG TCCTAATCTG AAAATATATC AGTGTGGACT TCCAAAAAAG
ATGGCTCTTG AGCTTTATAA GCCATTTTTG ATGAGAGAAC TGGTAAAAAG AGAAATAGCC
TCTAATATAA AAATAGCTAA AAAAATGGTA GAAGAAGAAG ATGACTATGT ATGGGAATTA
ATAGAAGAAA TCATCAAAAA CCATCCGGTT CTTTTAAACA GAGCCCCTAC ACTGCACAGA
CTGTCAATAC AGGCATTTCA GCCGACATTG ATAGAGGGGA AGGCAATAAG ACTTCACCCG
CTGGTATGTT CTGCATTTAA TGCGGATTTT GACGGTGACC AAATGGCAGT ACACTTAGTG
TTATCTCCTG AGGCCCAGAT GGAAGCAAGA CTTCTTATGC TGGCTACAAA TAACATTATT
GCTCCTTCAA GCGGTAAGCC TATAGCAGTA CCTTCACAGG ATATGGTTAT GGGATGCTAC
TATATGACAA AAGAAAGAAG AGGAGAAAAA GGGGAAGGAA AATTATTCTC AAATAAGAAC
CAGCTGATAA CTGCATACCA GAATAAACAG GTAGGGACAC ATGCGCTGGT AAAAGTCAGA
ATAGACGGTG AAATGATAGA AACAACACCG GGAAGACTTT TATTTAATAC AATGCTGCCA
AAAGAAGTAA GAGAGTATGA TAAAACATTT GGAAAAGGTG CTCTTGGAAA GCTGATAGCA
GAATTATATG AATTATACGG ATTTGAAAGA ACTTCTGACT TAATTGACAA AATTAAGAAT
TTTGGATTCC ATTATGCAAC ATCTGCAGGA ATAACAGTAG GAATAGAAGA TCTTGAAATA
CCTGAAACAA AAAAATCTAT TTTGGAAAAT GCCGAAAAAG AAGTAGCAGA TGTAGAAGAG
CAGTATAAAA ACGGAACTAT TATAGATGAG GAAAGATATA GAAAGACTGT AGCAATATGG
TCAAGAGCAG TAGATGACGT AACTAAGGAA ATGATGGATA ATCTTGATGA ATTTAACCCG
GTTTATATGA TGGCAAACTC TGGTGCCAGA GGTAGTATAG CACAGATGAG ACAGCTTGGA
GGAATGCGTG GACTAATGGC AGATACACAG GGAAGAATCA TGGAGGTACC TATTAAGGCA
AACTTTAGAG AAGGTCTGAA TATACTGGAA TTCTTTATGT CATCACACGG TGCCAGAAAA
GGTCTGGCGG ATACTGCATT AAGAACTGCC GAATCAGGAT ATTTGACAAG AAGACTTGTT
GATATTTCAC ATGATGTTAT TATAAATGAA CATGATTGTA ATACACTTGA AGGAATTATA
GTTTCGGATC TGGTTGACGG CGGTAATGTC ATAGAAAAAC TTGATGAGAG AATCTATGGA
AGAACTCTTG CAGAAGATAT AGTTCATGAA GGTGAAATAA TTGCCGAAAG AAATGAGTTA
ATCGGTAAAG AGCTGATTAA AAAAATAAGT GAATTTGGAA TAAAAGCCGT GAAAATCAGA
ACACCACTTA CATGTGCACT GGAAAAAGGA GTATGTCAAA AGTGTTACGG ACTGGATCTG
TCAAACCATA AAGAAATACT TAAAGGTGAG GCAGTGGGAG TTATCGCAGC TCAGTCAATA
GGTGAGCCGG GAACACAGCT GACAATGAGA ACTTTCCATA CAGGAGGGGT GGCACAGGCA
GCAGCTGTAC AAACGAATAT AAAGACGGAT GAAGCAGGTA AAGTTAAATT TAAAGATTTG
AAAATACTGG AAAATGAAGC AGGAGAGGAA ATTGTTGTTT CACAGAATTC AAAAATAGTA
ATAGATAAGC AAAAGTATGA AATTCCGTCA GGATCTTTAT TAAAGGTAAA AGATGGGGAA
AAGGTAGAAA AAGGTCAGGT ACTTGTGGAA TTTGATCCAT ATCATATACC GATAATAAGT
AATGAGCCAG GAAAAGTAGA ATTTAGAGAT CTTTATGTAA GAGAAAATAT TGATCACAAG
TATAATGTTA CTGAAAGAAT GGCTATAAAA CCAGTGGAAA GCGGAGATGT TAACCCGAGA
ATAATTATTT ATGAAAAAGG AAAGAAAGTA GATGAATACA GTATTCCTTA CGGTGCATAT
CTAATGGTAA GAGAAGGGGA CAAAGTAAAG AAAGGGCAGA TTATTTCAAA AATAATCAAG
TCCGGAGAAG GAACGAAGGA TATTACCAGC GGTCTTCCAA GGGTTCAGGA GCTGTTTGAG
GCAAGAAATC CTAAAGGGAA AGCTGTTTTG TCAGAGATAG CAGGGCGTGT ACTTATATCT
GATAAAAAGA AAAAAGGTAT GAGACTTATA CTGATAGTAA GTCCGGATAC AGGAAAAACA
ATAAAAGAAT ATACAGTACC AATAGGGGAG CATTTGGTTG TAACTAATGA AATGCTTATA
GATAAAGGGA CAAAACTGAC AGACGGACCG GTTTCACCGC ATGATATACT GAAAATAAAA
GGTCTGATAG AAGCACAGCA GTTTATACTG GAATCAGTAC AGCAAGTGTA CAGAGAACAG
GGAGTTTCAG TAAATGACAA GCATATAGAA ATAATAGTAA AACAGATGTT CCAAAAGGTA
AAAATCAAGG ATTCCGGAGA TTCTTTATAT CTGGAAGATG AATTAGTGGA TAAAAAAATT
GTGGACAAAG AAAATAATGA GCTTATCAAG GAAGACAAGA AAATAGCTAC ATACGAGCCT
GTTATTCAAG GGATTACAAA AGCCGCAGTA AATACAGAAA GCTTTATTTC CGCTTCATCG
TTCCAGGAAA CAACAAAAGT TCTTGCCAAT GCTGCAATAG AAGGTAAAGT AGACAGACTG
GAAGGATTAA AAGAAAACGT AATAATCGGT AAGAAAATTC CAGGTGGTAC AGGGTTTAAA
GAGTATAGAG ATATGCTTTT AAAAGAACCG GTATCAGAAG AAAATAACAG TTAA
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| Protein sequence | MSIRDFDSIQ IKLASPDKIR EWSYGEVKKA ETINYRTLKP EMDGLFCERI FGPAKDFECA
CGKYKRMRYK GIKCEKCGVE VTTSKVRRER MGHIDLAAPV AHIWYSKGTP NKMSLLLGLS
TKELESVLYF ARYVVTEPGE TNLEKGVILT DREYRLYKSQ FGEKFEAKMG AEGIIKLLEE
IDLARLEEEL KNELEVSQSS QKRKKVVKRL KIVRDFIMSE NRPEWMILTV LPVIPADIRP
MVQLDGGRFA TSDLNDLYRR VINRNTRLKK LISINAPEIV IKNEKRMLQE AVDALIDNGR
RGKPVVTQNN RELKSLSDML KGKNGRFRQN LLGKRVDYSG RSVIVVGPNL KIYQCGLPKK
MALELYKPFL MRELVKREIA SNIKIAKKMV EEEDDYVWEL IEEIIKNHPV LLNRAPTLHR
LSIQAFQPTL IEGKAIRLHP LVCSAFNADF DGDQMAVHLV LSPEAQMEAR LLMLATNNII
APSSGKPIAV PSQDMVMGCY YMTKERRGEK GEGKLFSNKN QLITAYQNKQ VGTHALVKVR
IDGEMIETTP GRLLFNTMLP KEVREYDKTF GKGALGKLIA ELYELYGFER TSDLIDKIKN
FGFHYATSAG ITVGIEDLEI PETKKSILEN AEKEVADVEE QYKNGTIIDE ERYRKTVAIW
SRAVDDVTKE MMDNLDEFNP VYMMANSGAR GSIAQMRQLG GMRGLMADTQ GRIMEVPIKA
NFREGLNILE FFMSSHGARK GLADTALRTA ESGYLTRRLV DISHDVIINE HDCNTLEGII
VSDLVDGGNV IEKLDERIYG RTLAEDIVHE GEIIAERNEL IGKELIKKIS EFGIKAVKIR
TPLTCALEKG VCQKCYGLDL SNHKEILKGE AVGVIAAQSI GEPGTQLTMR TFHTGGVAQA
AAVQTNIKTD EAGKVKFKDL KILENEAGEE IVVSQNSKIV IDKQKYEIPS GSLLKVKDGE
KVEKGQVLVE FDPYHIPIIS NEPGKVEFRD LYVRENIDHK YNVTERMAIK PVESGDVNPR
IIIYEKGKKV DEYSIPYGAY LMVREGDKVK KGQIISKIIK SGEGTKDITS GLPRVQELFE
ARNPKGKAVL SEIAGRVLIS DKKKKGMRLI LIVSPDTGKT IKEYTVPIGE HLVVTNEMLI
DKGTKLTDGP VSPHDILKIK GLIEAQQFIL ESVQQVYREQ GVSVNDKHIE IIVKQMFQKV
KIKDSGDSLY LEDELVDKKI VDKENNELIK EDKKIATYEP VIQGITKAAV NTESFISASS
FQETTKVLAN AAIEGKVDRL EGLKENVIIG KKIPGGTGFK EYRDMLLKEP VSEENNS
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