Gene Sterm_2872 details

Gene Information

• Locus tag: Sterm_2872
• ID: 8598327
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 3038754
• End bp: 3039368
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 30%
• Product: ERF family protein
• Protein accession: YP_003309647
• Protein GI: 269121470

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00728051
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAATTT ATGAAAAGTT ATCTAATATA CAGCAGGAAT TAATAGTACC GAAAAATCAA 
AGAAATGATT TTGGTGGATA TAATTTCAGA AGTGCTGAAG ATATACTAAC TGCATTAAAA 
CCACACTTAA AAGAACAAAA AGTTACTATA TTCTTTAGTG ATAGTGTTAT TGAAAAAGGA 
AATAGAATAT ATGTTGAAAC TACACTAAAC TTTGTAGATA TAGAAAACGG TGAAAAAATA 
GAAACAAAAG CCGCAGCACG TGAAGATGAA GAAAAGAAGA AATATGACGG TTCACAATTA 
ACAGGTTCAA GTTCATCTTA TGCAAGAAAA TATGCTCTTA ATGGATTATT TGCAATTGAT 
GATGTAAAAG ATAGCGATTT TACGAATACT GGCGAAAACA ACAAAGCAAG CGAAAAATCA 
GCAAAAAATC CTAAACGAGA TGGACAAATC AAATTTATTA AGCAGCATCA AAAGGAATAC 
CAATCATATA TAACAGAATG TCTAAGCAAA GCCGGAAAGG AAACTATTGA GGAATTAGAC 
GATAAACAAA TAGACTACTT AAAAAATAAC ATTGCCAAGA AATTAGGAAG TCGAAATAAG 
GAAGGAGTGG CATAA 

 

Protein sequence

MSIYEKLSNI QQELIVPKNQ RNDFGGYNFR SAEDILTALK PHLKEQKVTI FFSDSVIEKG 
NRIYVETTLN FVDIENGEKI ETKAAAREDE EKKKYDGSQL TGSSSSYARK YALNGLFAID 
DVKDSDFTNT GENNKASEKS AKNPKRDGQI KFIKQHQKEY QSYITECLSK AGKETIEELD 
DKQIDYLKNN IAKKLGSRNK EGVA