Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2809 |
Symbol | |
ID | 8598264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 2995379 |
End bp | 2997436 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003309584 |
Protein GI | 269121407 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000401282 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATATAT GGAAACAGCT GTGGGCCTAT ACAAAACCAT ATAAAAGATT TTTATTTTAC AGTCTTTTTG CCTTAATGCT TTCCACTACT ATATTTATAG TGGGAACAAT GATGACAAAG ATAATTATAG ATAAATATAT TATGGGGATG TTCAGACCTG TTTCAGTAAG TAATACAATA CAGGATGAAA AAAAATCAGT TTTTTATAAG GGGAAATATT ATACCAGAAT TGAGGAAAAC AGTAAGCTTA ATATATTAGA AAAAAACAGC ATAATTCTGA CTAAGGAAGG ATATGTGCTT ATAAATTCTG ATATTGCAGA TGAGAAAGCA GAAATAAAGG ATAACAGACT TTTTATAAAT AATAAAGAAA GTAATGTCGG ATTTAATATA CTTACAAAAG ATGAAGTGTG GAATTTTTAT GAACCGTATG TCGGATCGGC AACACTTGCG GTACTGTCAA TTTTTATACT GTATATGGCT GCTGCATGTC TTATGTACAC ATGCGGATAC AGCCTGAGAA TACTGGCAAC AAAGGTAGTG TTTGATCTGA GGAAAGATGC ATTCAAGCAG CTTCAGAAGC TTCCTGTACA GTATTTCAGC GATTATCCTG ACGGAAAGGT GGTATCTTAT ATTGTTCACG ACAGTAATGC AATATTTGGA TTATATGAAA ATACACTTCT GGAAATAGTT AAGGCTGTAG TGCAGGTAGT CTTTATATAT ATAGCAATGT TTCTGCTGAA TGTAAAGCTT GCATCTTATG CATTGCTGAT ACTTCCTATT ATTGCAGTCT GGCTGTATCT TTACAGAAAA TATGTTTCGG AAAACTTTAA GGAAACAAGG GAAATACAGT CCAATATGAA CGCAATGATG AATGAACAGT TTCAGGGAAT AGAAGTAGTT CAGGCCTTTA CACATGAGGA TGAGTCAATA GCAGAATTCG ACGTACTGGC AGATGATTAT CTGGAATATA AGAGGAAATT TGCTGTGTTA AGTGCGCTTT ATACTGACGG TATGGCTCAT ACTGTACGCC GTCTGGCTAT TACACTGACA CTTGTGTATT TTGGAAGGGA ATTTTTGAGC GGAAGTATGA TTTTATCAGT AGGTACGGTA TTTGCGTTTG TACAGTATGT AGACAGCGCA TTTGCACCGT TGTTCTGGTT TTTCGGGGTT TTGAACAGAT TCGAAAGGGC AATTGTTTCG GCGAGAAGAA TATTTGATAT GTTTTTGAAT GTTCCGTCTA AGGAATTAGA ATTCAGTACT GAAAATCTGG AATTGAAAGG AAATGTGGAG TTCAAAAATC TTAGTTTTGC TTATGATAAT GAAAATTATG TTTTAAAAAA TATAAATCTC ATTATACCTG CCGGGAATAC AATAGGAATC GTGGGTCATA CAGGAAGCGG GAAAAGTTCG CTTATGAATG TTCTGCTCAG GTTTTATGAC TATCAGAAAG GTGATATTGT AATAGACGGA AGATCTTTGA GGGATTATCC TGTACAGACT TACAGAGCCC ATGTGGGAAT GGTTCTTCAG GATCCTGTGC TTTTCAGCGG GACATTATTT TCAAATATAA CTTTTAATAA TAATGATGTT ACTGAAGAAA GAGTTCTTGA GATAATGAGT CAGATAGGCG CACAGAGCTT TATTGATAAG CAGCCGAACG GCATACACGA GTCAGTAGAG GATATGGGAA GAAATTTTTC TGTTGGTGAA AGACAGCTTA TTGCCTTTGC AAGGGTAATG GTCTATGATC CGGAGATATT AATACTGGAC GAGGCCACTG CAAATATTGA TACTGAAACT GAAATTATGA TACAAAAAGC TTTGAACGTA ATATCACAAA ACAGAACTAC ATTTATTATT GCGCACAGAC TTTCTACGGT AAAACATGCA GATCAGCTTA TAGTTCTGAA TAAAGGTAAT ATAGTAGAAA GAGGAACACA CGAAGAACTT GTGGAAAAAG ACGGGCTTTA TGCAAAAATG TATCAGTCAC AGATGAGAGA AGAGTATACT CATGAAGTTT TGAAAAATAG TAAAGAAAAT TTTGTATTGA ATATGTAA
|
Protein sequence | MYIWKQLWAY TKPYKRFLFY SLFALMLSTT IFIVGTMMTK IIIDKYIMGM FRPVSVSNTI QDEKKSVFYK GKYYTRIEEN SKLNILEKNS IILTKEGYVL INSDIADEKA EIKDNRLFIN NKESNVGFNI LTKDEVWNFY EPYVGSATLA VLSIFILYMA AACLMYTCGY SLRILATKVV FDLRKDAFKQ LQKLPVQYFS DYPDGKVVSY IVHDSNAIFG LYENTLLEIV KAVVQVVFIY IAMFLLNVKL ASYALLILPI IAVWLYLYRK YVSENFKETR EIQSNMNAMM NEQFQGIEVV QAFTHEDESI AEFDVLADDY LEYKRKFAVL SALYTDGMAH TVRRLAITLT LVYFGREFLS GSMILSVGTV FAFVQYVDSA FAPLFWFFGV LNRFERAIVS ARRIFDMFLN VPSKELEFST ENLELKGNVE FKNLSFAYDN ENYVLKNINL IIPAGNTIGI VGHTGSGKSS LMNVLLRFYD YQKGDIVIDG RSLRDYPVQT YRAHVGMVLQ DPVLFSGTLF SNITFNNNDV TEERVLEIMS QIGAQSFIDK QPNGIHESVE DMGRNFSVGE RQLIAFARVM VYDPEILILD EATANIDTET EIMIQKALNV ISQNRTTFII AHRLSTVKHA DQLIVLNKGN IVERGTHEEL VEKDGLYAKM YQSQMREEYT HEVLKNSKEN FVLNM
|
| |