| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_2723 |
|---|
| Symbol | |
|---|
| ID | 8598179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 2901841 |
|---|
| End bp | 2903022 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_003309499 |
|---|
| Protein GI | 269121322 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTACG TTGGTATTGA TATTGCCAAA CATAGCCATG AGGCTTCTAT TACTGATTCC
AACGGTTATC TTCTTGGAAA AAGTATTAGC TTTTCAAATT CTCAAAAAGG ATGTGAGAAA
TTAATTGCTT TGTTAGAACG TTTCTCTGCT ACTGTTGATA ATACTATCAT TGGTCTGGAA
GCTACTGGTC ATTATTGGTT ATCTGTATAC TCATTTTTAC TTGAATTAGG TTATGATTTA
AAAGTTATCA ATCCTATTCA ATCAGATGCA TTCAGAAAAA TGTATATTCG GCAAACCAAA
AATGATTCTA AAGATTCCTT TGTAATAGCA CAAATTATGC GCTTTGGTGA ATTTTCTTCA
ACAATCTTAT CTGATGAAAA TATTATGGCA TTACGTCAAC TATCCCGTTA TCGTTTAGCT
TTGGTTGATG AATGTTCGGA TTGGAAACGT AAAGTCATAT GTCTTTTAGA TCAAGTATTT
CCTGAATACT CTTCTTTTTT TTCTGATACT TTCGGCGTTA CTTCAAAAGA AGTTTTACTT
AAATATCCTA CTCCTGAGGA CATGATTACT GTTAGTTCAA AAAAACTTAC AACATTACTT
AATAAAGCCA GCAAAGGTCG ATTTAATATT AATAAGACAA AACAATTAAA AGAAACTGCC
AATAATTCTT TTGGTATTAA ATTTGCTAAA GATGCCTTTT CTTTTCAAAT CAAACAAATG
ATTTCACAAA TTATTTTTAT TGAAAATCAA CTTAATGATT TAGAAAAAGA AATTTCTTCT
CTTCTACACG AAACCAACCA TGTTATCACT TCAATTATTG GTATTGGTGA TGTACTAGGT
GCTCTCATTA TTGGAGAAAT AGGTGACATC TCCCGATTTG AATCTGCCCC TAAACTTGTT
GCTTTTTCAG GACTTGATGT AAAAATCAAT CAATCAGGGC AATTTTCCGG AAGCAGAATG
AGAATATCTA AACGTGGATC TCCATATTTA CGACGTGCTA TTTGGACTGC TGCAAATCGC
GCGGCTTTTG CTGATCCTGT TTTATCTAAT TACTATCAAT CCTTAAGAGC CAGAGGTAAA
CATCATTTAA CTGCTGTTGG AGGTGTTGCT CGAAAACTTT GTAATATTAT TTTTCCTGTA
CTGCGTGATA ACAAACCATA TACTCCTATT TTCCCAAAAT AA
|
|---|
| Protein sequence | MFYVGIDIAK HSHEASITDS NGYLLGKSIS FSNSQKGCEK LIALLERFSA TVDNTIIGLE
ATGHYWLSVY SFLLELGYDL KVINPIQSDA FRKMYIRQTK NDSKDSFVIA QIMRFGEFSS
TILSDENIMA LRQLSRYRLA LVDECSDWKR KVICLLDQVF PEYSSFFSDT FGVTSKEVLL
KYPTPEDMIT VSSKKLTTLL NKASKGRFNI NKTKQLKETA NNSFGIKFAK DAFSFQIKQM
ISQIIFIENQ LNDLEKEISS LLHETNHVIT SIIGIGDVLG ALIIGEIGDI SRFESAPKLV
AFSGLDVKIN QSGQFSGSRM RISKRGSPYL RRAIWTAANR AAFADPVLSN YYQSLRARGK
HHLTAVGGVA RKLCNIIFPV LRDNKPYTPI FPK
|
|---|
| |