Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2704 |
Symbol | |
ID | 8598160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 2877983 |
End bp | 2879950 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | |
Product | membrane protein-like protein |
Protein accession | YP_003309480 |
Protein GI | 269121303 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00615533 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA AGAAAGAGAT ACTGGATAAA ATTCCATTTA AAGAGACAAA TTATATTTTT GGTCTTGTTT TTATTTATAT ACTGATTTTA CCTAACTTAT TTCCGTTAAG TAATGTAATG ACAGCTATTT TTGTAGGTGT CTATTGTTAT AATACAAATA AAAAAGGTTT TAGTAAAAGC AGAGCAATAA AAAGATATGT CATGTATTTT TTATCTTTAT CACTTTTACT TTTCATATGT TATTTTTCTA CACATAACTG GATTCTGCTT ATAGTTTTGG GTTTTCTGGT TACATTTATT ATCACTTTCT TTGGAATGGA GGAATATATA CCCGGCTTAA AGGACTATTT TCCTACATTG TATGTATTTG CTATTTATCA GGGAAATCTT CCGGAGCTTT CGCTTGTTTT CACAAAAATA GAGGTAATGT TCGTAGCAAT ATTTATTTCG GCAGTATACG GAATTGTAAT GAATAAAGGG AAGCCGATAG ACAGAATAAC AGAATGTATA GACAAGTATC TGATGGCTGC TATAGAGGAA ACAGAACAGT ATCTTGCCGG AAATAAGCAG AACTATGACA GAGTGATTGA AAATACCCGT GAAGCATATA ATGAATGCCT AAAGGAGTAT TATAAGTCCA GTGAGGGGAT ATATCTGGTA TCTCTGTTAA GCAGGGAGAT AATGCGACTG ATGCTAAAGC TGCATTTTTT AATAGAGAAC ATAAGAATAA ATCCTAATTC AGACAAGAAA AAAATGACAG AAATGCTTTA CTTTTTCGGA CTAATGTTAT ATGAAAATAA TAAATTCAAT AAGAATGACT TCGTATGGAA TGATAAGGAG GAAGTAGAAT TTTTTTATGA TGTGTACAAT CTGAAAAGAA AAGTATATGA AAAAAATGAT GTTGGAATTA AGCTGAAATT TTTTCCTGTT TACAGAAAAG ACGAATTTAT ATACTGGTTC AAATCGAATT TTAGCAGGAA ATCAATATTA TTCAGATATT CCATGAGACT GGCAATACTG ATGACAACGT CTTTCATAAC TGCAAAGCTG CTGAATTCAC CAATGGGATA CTGGCTTCCC ATGACAAGCG TACTGCTGTC CCAGCCATAT TTTGAAGAAA CGTACAAGCG TGTGGTAGCA AGAGTAATAG GAACATTTAT AGGGCTGTTT CTGGCCTCAT ATCTTTTTAA GGATATAAAT TCTCAGACAT TAATATATAC ACTGGTTCTT ATACTTAATT ATATTATATT TCTTATAGTA GGACTAAACT ATTTTATTGC CGTAATAGTA ATTACAATAA CAGCAATGCT TTCTACAAAA GGGATACAGA CTCAGGAGGT ATTGTTCTGG AACAGGGGAG TAATGACATT TCTCGCCGGA TTATATTCTT TTCTGGTAAG CTATATATTT AAGAGTACTG CTCAAAAAGA GATAAAATAT AATTTTACAA ATTTACTTAA AATAAGAGTA GAAATGCTAG ATATAATACT GAATCGTCAT AAAGGGGCAA AGGATAACAG GAAATTTGAC AGGCTTATGA TTAATTCAAA TATGTACAGA GAAAAAATTA TTTTTCAGCT GAGAAAAAAA CCGGATAAAG AAAATATCGA ATTTTTGGGA ATGGATACTA TAATAACAGA AAGGCTTATA GCACTTCATA TGGCTATAGA CCTGAAAGCT CTGACTAAGG ATGAGCGGGA AAGCCTGGCG ATCCTGCGGA AAGTATGGCT CTATACATAT ACATTCTTTA ACAGCGGAAA TATAACAAAT CCAAAAGCAT TTCTGGAATT AAATCTTAAT GTCAGAAAGA TGGAAAACAA ACAGAATAAT GATATTTATA AATTATTATC CATAAGCTAT AATTATCTGT TGAAAGTAAT AAAATACAGT AAAAATGATC CAAAACAAAA AAGAAAATTA AATTTTTTCA GAAAAGTAAC AGGTGTATCA AATTTTCTCT TTAAATAA
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Protein sequence | MKFKKEILDK IPFKETNYIF GLVFIYILIL PNLFPLSNVM TAIFVGVYCY NTNKKGFSKS RAIKRYVMYF LSLSLLLFIC YFSTHNWILL IVLGFLVTFI ITFFGMEEYI PGLKDYFPTL YVFAIYQGNL PELSLVFTKI EVMFVAIFIS AVYGIVMNKG KPIDRITECI DKYLMAAIEE TEQYLAGNKQ NYDRVIENTR EAYNECLKEY YKSSEGIYLV SLLSREIMRL MLKLHFLIEN IRINPNSDKK KMTEMLYFFG LMLYENNKFN KNDFVWNDKE EVEFFYDVYN LKRKVYEKND VGIKLKFFPV YRKDEFIYWF KSNFSRKSIL FRYSMRLAIL MTTSFITAKL LNSPMGYWLP MTSVLLSQPY FEETYKRVVA RVIGTFIGLF LASYLFKDIN SQTLIYTLVL ILNYIIFLIV GLNYFIAVIV ITITAMLSTK GIQTQEVLFW NRGVMTFLAG LYSFLVSYIF KSTAQKEIKY NFTNLLKIRV EMLDIILNRH KGAKDNRKFD RLMINSNMYR EKIIFQLRKK PDKENIEFLG MDTIITERLI ALHMAIDLKA LTKDERESLA ILRKVWLYTY TFFNSGNITN PKAFLELNLN VRKMENKQNN DIYKLLSISY NYLLKVIKYS KNDPKQKRKL NFFRKVTGVS NFLFK
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