Gene Sterm_2548 details

Gene Information

• Locus tag: Sterm_2548
• ID: 8598009
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 2709946
• End bp: 2711871
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 39%
• Product: PTS system, beta-glucoside-specific IIABC subunit
• Protein accession: YP_003309329
• Protein GI: 269121152

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.414224
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTATG CAGAATTATC AGAAAAAATT ATAAAAGGAG TAGGAGGGAA GGAAAATATT 
GCCAGTCTTG TACACTGTGC CACAAGACTC AGGTTCAAAT TAAAGGACGA CAGCAAGGCC 
GATAAAAAAA AGATAGAAAA TTTTGACGGA GTTGTAACTG TAGTGCAAAG CGGCGGACAG 
TTCCAGATAG TCATAGGAAA CAATGTAGCA AAGGTCTATA ATGAAATTAT GGGGAAAATA 
CAGCTTAATA CAGAAGATTC ACAAAGTGAA AAAGAAGGAA ATATTCTAAA CAGACTGATT 
TCTATTATTA CTTCAATATT TACGCCGTTT TTGGGGGCTA TGGCAGGTGC GGGGATATTG 
AAAGGACTTC TGGCACTGGC AACTTATAAT AATATACTTT TAAGCCCTGA TTCAGGAACT 
TACAGAATTC TTTATGCAGC CGGTGATTCC ATATTTTATT TTCTTCCGGT TCTGCTTGCA 
GCAACAGCAG CCGTGAAGTT TAAGACTAAC AAATATGTTT CCATGGGTAT AGCACTGGCA 
TTATTATATC CGGATATGTC AGGTCTGCTC GCATCCTCAA CAGGAGAAAC ACTTTTGGGA 
ATACCTGTGG CAGCAGAATT TTTGGGAATA CCCGTAGTGA GTGCTTCGTA TGCTTCGAGC 
GTAATTCCTA TTCTGCTGGC AATATGGCTT CAGGGATATC TTGAAAGATT CCTAGAGAAG 
TTTATGCCTT TAAGCATAAA AAATATAATC ATACCTCTTA TAGTACTTAT TATTATGGTT 
CCGGGAACAT TTATCCTTGT CGGGCCTGTG GGCGGTTATA TGGGAGAAAT ACTGTCAAAA 
TTATATCTGA ATGCTTATAA TCTGAGCCCG ATGATTGCAG GTCTTATAGT AGGGGCATTC 
TGGCAGGTAT TTGTAATATT CGGAGTACAC TGGGCTTTTA TACCGATTAT GATTAATAAT 
CTGGCAACAC CGCCGGCAGG TCTTGGATAT GATACTATGC TTCCCATGCT TCTTGCTCCG 
GTTTTGGGAC AGGCGGGAGC TGCACTGGGA GTATTCCTTA AAACAAAGGA TAAAGGAATG 
AAATCATTAG CAGGTTCATC TATATTATCA GCAATATTTG GAATTACTGA GCCTACTGTT 
TACGGTGTTA CCTTAAAGCT GAAAAAGCCA TTTATATATG CCTGTATAGG CGGAGGAATA 
GGCGGTGCAA TAGTAGGATT CGCAGAGGTA AAGGGCTTTG TTATGTCATT GGCAAGTGTA 
CTTTCCATAG TTACATATAT AAAACCGGGG ACAATAACAG ATCCTGCCAT AACATCAAAT 
GTGGGAGCCG GAGCAGCAGG AGCGTTTATT GCCATGATAA TTGCATTTCT GCTTACTTAT 
ATACTTGGTT TCGATGATAT AGACAAAACA GAAGAAAATA ACCAGTCTGA TGAAAGAGAA 
GAAGTAAAGG ACAGCTTTAA GGATAGTATA AATAAAGAAA CAATATACAG TCCGTTAAAA 
GGGAGAGTAA AAAAACTTTC AGAAACTGAA GATACAGTGT TTGCTTCGGG AGCTTTGGGA 
AAAGGTGTGG TAATAATACC GGAAACAGGA GAGCTGAGAG CACCTGCCGA CGGAGTAATA 
ACAAGTATTT TCACTACAAA GCATGCAATA GGAATAACAA CTGTAAATGG TGCTGAAGTT 
TTGATACATT TAGGAATAGA TACAGTACAG CTTGGAGGAA AGTATTTTGA AGCTGTGGCA 
AAGGAAAATG ATAAGGTGAA AAAAGGAGAT CTGCTTATAA AGTTTGATAT GGAAAAAATA 
ATAGATGAGG GATTTTCTAT GGATACACCT GTAGTAATCA GCAATTCCGA AGAGTATATG 
GATGTACTTG CAGCGGATAA GGATGAAATT GATATGGAGG AACAGCTTTT GACTTTGATA 
AAATAG 

 

Protein sequence

MNYAELSEKI IKGVGGKENI ASLVHCATRL RFKLKDDSKA DKKKIENFDG VVTVVQSGGQ 
FQIVIGNNVA KVYNEIMGKI QLNTEDSQSE KEGNILNRLI SIITSIFTPF LGAMAGAGIL 
KGLLALATYN NILLSPDSGT YRILYAAGDS IFYFLPVLLA ATAAVKFKTN KYVSMGIALA 
LLYPDMSGLL ASSTGETLLG IPVAAEFLGI PVVSASYASS VIPILLAIWL QGYLERFLEK 
FMPLSIKNII IPLIVLIIMV PGTFILVGPV GGYMGEILSK LYLNAYNLSP MIAGLIVGAF 
WQVFVIFGVH WAFIPIMINN LATPPAGLGY DTMLPMLLAP VLGQAGAALG VFLKTKDKGM 
KSLAGSSILS AIFGITEPTV YGVTLKLKKP FIYACIGGGI GGAIVGFAEV KGFVMSLASV 
LSIVTYIKPG TITDPAITSN VGAGAAGAFI AMIIAFLLTY ILGFDDIDKT EENNQSDERE 
EVKDSFKDSI NKETIYSPLK GRVKKLSETE DTVFASGALG KGVVIIPETG ELRAPADGVI 
TSIFTTKHAI GITTVNGAEV LIHLGIDTVQ LGGKYFEAVA KENDKVKKGD LLIKFDMEKI 
IDEGFSMDTP VVISNSEEYM DVLAADKDEI DMEEQLLTLI K