Gene Sterm_2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_2423 
Symbol 
ID8597887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2590368 
End bp2591642 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content38% 
IMG OID 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_003309207 
Protein GI269121030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAATAA AGATTATACC CACAAAATTA AAAGGAGAGA TTAATATACC GCCGTCAAAA 
AGCTATTCTC ACAGAGCAGT AATAGCAGCA TCACTTACAG ATGGTGAAAG CCGTATAGGG
AATCTGAATT TTTCTGTAGA TATTCAGACA ACAACAGATA TAATGAAAAA TTTCGGGGCA
GTAATAGAGC AGGGGGAGGA TTACCTGAAA ATAACCGGGA ATCAAGGAAA TGTAACAATA
GAAAATAATT ATATCCAGTG TAATGAATCA GGGTCTACGA TAAGATTCAT AATACCGATA
GCTTTAAGCC GGAATAACGG TCAGCTTACA ATTGACGGAA AAGGAAAGCT CATAGAAAGA
CCTTTTGATA CATATTATAA GATATTCGAC AAACAGGGAA TAAGCTATAA AACTACTAAC
GGAAAGCTTC CTTTATATAT AGAAGGCAGT CTTAAAGCTG ATACATTCGA GGTAGAGGGG
AATATAAGCT CGCAGTTTAT AACAGGTCTT TTATATACCT TGCCGCTATT GGACGGAGAT
TCGGAAATTG TGATAAAAGG GCCTCTGGAG TCCAAAGGGT ACGTTGATCT GACGCTGAAA
ATACTGGAAA TGGCAGATAT AGAGGTAAAA AACAATGATT ATAAAAGTTT TCTTATAAAA
GGAAACCAGA CTTATAAAGG ATTCGACTAT ACAGTAGAGG GGGATTATTC TCAGGTTGCC
TTCTGGATAG TGGCCGGTAT ATTAAGTGAG GAGATAAACT GCAAAAATGT ATATAAGGAT
TCCCTTCAGG GTGACCGGGC AATAGTGGAG ATAGTACAGA GAATGGGTGC AAATCTTGAG
ATAAATGATA AAAATATAAA GGTTTTTCCC GGGAAAACTA AAGGAACTGT AATAGATGTA
TCCCAATGTC CCGATATAGC TCCGGTGCTT ACAGTACTTG CAGCACTAAG CGAAGGAGAG
ACAAGAATCA TAAATGCCGA ACGTTTGAGA ATAAAAGAAT CGGACAGAAT AACTTCCATG
AGAACCGAAC TGAATAAACT CGGGGCTGAT ATAAGAGAGG AAGGAGATAC TCTGGTAATA
AACGGCGTAG ATGAATTAGA AGGCGGAGTA ACTGTAGATT CATGGAATGA TCACAGAGTA
GCAATGGCAC TGGCAATAGC TTCTATAAAA TGTAAGAACC CTATTCTTAT CACAGATGCA
GGTGCTGTGA GAAAGTCTTA TCCGAACTTT TGGAATGATT TTGTAAGTAT GGGCGGAAAA
GTCGGAGAAA TTTAA
 
Protein sequence
MEIKIIPTKL KGEINIPPSK SYSHRAVIAA SLTDGESRIG NLNFSVDIQT TTDIMKNFGA 
VIEQGEDYLK ITGNQGNVTI ENNYIQCNES GSTIRFIIPI ALSRNNGQLT IDGKGKLIER
PFDTYYKIFD KQGISYKTTN GKLPLYIEGS LKADTFEVEG NISSQFITGL LYTLPLLDGD
SEIVIKGPLE SKGYVDLTLK ILEMADIEVK NNDYKSFLIK GNQTYKGFDY TVEGDYSQVA
FWIVAGILSE EINCKNVYKD SLQGDRAIVE IVQRMGANLE INDKNIKVFP GKTKGTVIDV
SQCPDIAPVL TVLAALSEGE TRIINAERLR IKESDRITSM RTELNKLGAD IREEGDTLVI
NGVDELEGGV TVDSWNDHRV AMALAIASIK CKNPILITDA GAVRKSYPNF WNDFVSMGGK
VGEI