Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2417 |
Symbol | |
ID | 8597881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 2576170 |
End bp | 2584137 |
Gene Length | 7968 bp |
Protein Length | 2655 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003309201 |
Protein GI | 269121024 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAAAA ATAAAAAGAG AGTGCTTTTT TTATTAGCAG CTAATTCTAT ACTGTCTGCA GGAGCATATA GTGAGAGTAT TTCAGATGCA AAATATGAAA AATTATACAA TAATATGGTA AAAAATATCC AGACTGGAAA ATCAAATGAA AGCAATAATA AACTTATAGA GTCAATATTA AAGAAAAGAA ATAAAGAATT AAAAGATTTG TATGCACAAA GTGATTATAT CGTAAAACCG GAGTATCTGG AATGGCAGAT ATTTGCTTCG GGATTTTATG CTGAAAAAGA CAGAGGATAT GACAGTGATA AATATGGCGA CGGAAGCAGC CAAAAAAACT CAATGCAGGT TGACGGGACA GATCTGAGAA CAGCAAAGCA AATACAGATA GGTGCTACTA TTCCTATAAA AACAGTTAAT GACTTTGCAT TGGAACCAGA AATCAGTATA AATAAAAAAG AAATAACAGT TGATAGTATA CAGGCACCAT CAGTAATTCC GAAAACTATA CCTACAATTG TGATTCCAAA TGTGAGTATT CCTGTTATTA CAGCACCAAC AGTTCCATCG ACAGCAATAT CTACAGTTAC CGCTCCTGAT ATTGATGTTT TGAGTTCAGT TAATATTCCG TCTGTTAATT TAACTTCTGT TACTACTCAA AATCTTAGAA TTAACAGTTC AAATGTGAAT ATAATTTATT CTAGTGCAGG TATTTATAAC AATAATATCC CGATCACTCT TAGCACCAGT AGTTCAGCAG CACTTGGAAT TACTGCTGTT AGTAATTCTT CTAATGAAAT TATAAATAAT AGTAGTATTA TAGGAGCAGC GAATCAACAG GGTCAAGTAG GCTTTGGATA TATTCCTGGG AATGTTTCCG GTGCGTTTCA AAGTACTTTC TCGACACTAA CTAATAATGG TTCTATAACA ATGAATTCCA AAAACAGTGC AGGTATGATT TTAATACCAG ACATTGATAC CGATCCTGGG GTTAATGGAG CTTTAGCTGA TATATTAACA GGTGCTTCAA CACCGGGAGA TACAAACAAT GTTGTTCAAA AAGCAATAAA TAATGGTTCC ATCACAATAA ATGGATCAAG AAGTTATGCA TTCTTAACTT CTCCATATTA TGACGGAACT GGTAGTCTGG ACTGGAGTTA CAACTTTGGT ATCACAAACA ATGGCAATTC CGCATATGTA AGTAATACTA ATACTGGAAC AATTCATGTT AATGGTGACG AAGCGACAGG TTTCACTATT TTAAAAGGGA TTCATCAGGT GTATAATTTT GGAAGTATTT TAGTAGGTGT TTCTTCTTCA GATAATGCTA TTGGTTATGA TACTACAATT AAATCATTTA CAACTATTAA TGGAACTTTT GTTTCTCAAT CGAGTGATGG CAATTTAAGC GGAAATAACA TTAGTATGGT TGAAGGGGCA TCTGCATTAT ATGCTTCGAA AGCTCCTTTA GAATATGGCT GTGATCCTTC TATTTGTACA GGATATTATA AATATATAGG TGACGGTCAG GTTTTAAATG CTGCTGGTGC TGTTATTACA ATTGGTAAAA ATGCCGTAGA GAGTAGTGGC ATACGTGTAG AAGGTACAGG TTCTATACAA AATAGAGGGA TAATTAAAGT AATTGGTACT GGTAATTATG GTATGGTTGC TACTGGAAAT GGGAATGTCA TAAATTTACG TGATAAAAAT GGAAATATAA ATGTCGGATT AGATGATAAA TATATAGGGA TTTTTATCCA AAGTAGTAGA TCAGTGGGGA CATACGTTCA AGATAGTGGT AATATAACTA TACAGGGTGG AAAAGTAGTG GTAGGTATAG ATGAAAATGG TACTAAAATT AATGATTTTA ATAATAATAT AATTAAAGAT TCAGCAGGAA TATATGCTAA GAATGGAAAT ATCTCTATTT TAGATATATC GTTTTGGGAT ACAGAAAGTG ATTATGGAAA AGTGATTACT AATGCTGAAA ATACACACGC AGTAATACTT ACAAGGGAAA ACTCTACCCT TTCTACCAAT TTTTACAATC AAGGGTTAAT TAATAATCAA CATGTAAATA CTATTGGTGT CTATGTCTCA GAAGGCGCAG AAGTTAAACA GGAAAATCGA GGTTATGTAC AATCTTCAAA TGGCGGGCTA GATGGAATTA CTACAGGGAC ATATAACAAT GCCCAGATTA TTTCTGGAGA TGGAGCAATT GGCGTGTATG CAGTAGGAAC TGGACTTTCC GCAGAAACTA GAGTAAATAT CATTTCAGGA AAAATAATCG GCGGGAACAG CATACTGTCT CCGACTACAG CTACAAGTAT TGGTGTTTTA GGTAAAAAAA ATGCAGAAAT AACATTAGGA AACGCTGTTA ATTCACCAGA TATTATTATG GGAACTAATT CTGTATCACT ACTCATACAA GATAAAATAA ACTTAAATAT AAATAATGTT ATTAGCCAAA TAGGAACTGA CTCAGTATTC GGTTATTTCG ACAAAGCTAA TGGTGACTTA AAGAATATAA ATAAAATAAA TTTTCAGAAT GTCGGTGCGA ATTCAATATT ATTTTATATG GCTAATAATT CAGATGTAAA TGTTGATAGT GATTTTACAT TAACAACTGG GGGAGTATTT CCAGGAACAA CAGCAGGATT TATTTCTGAA AATAGTAAAA TTTCTTTAGA TACCGGAAGA ATTTATACAA CAAATACTGC TGTAGGGCTT ACTGCACAGT CAGTAAATGG AAAAACTTTC AGTGATGGAA CTGTTGTTAA TATAAATAAA AATAAGACAG GGGCTGAAAA CAGGGGAACT ATTATAATGA CTTCCGCAAG TGCAGTTGGA ATGTATACAA AATATGGAAC TTCACTAAAT AATTCTACAG GACTTATAAA CATAATAGGT ACTGATGGAA TAGGAATGTA TTCGGAAGAA GAAGCAGACA TTAAAAATTC TGGAAAAATA ACTCTTAATA ATACAGGAAC AATAGGGTTA TTTGGAAAAG GAAATTCAGG AACTCTGTTA GGTACTTCAA CTGATACTGT GAATATTGTT AATAATGGAA TAATAGAGCT TAACAATGCA AATTCTGTAG GAATATATAT TAATAATAAT AAAAACGGAG CAGTTGTTAC TGATGCTATA ATCTCAAATA ATGCAACAGG TACAACTTCA AGTTTTGGGT CAACAGAGAA AAATACCATT AATGTAAAAG GAGATAATTC TATTGGTATA TACGCACCAT TTTCAATCGT TTTACAAAAT GGAAATATTG ATTTGGTAGG TACAGGTACA GTAGCGATTT ATGGTTCAAA TGGATCAAAC ATATCAGGTG GTGGAAATAT TGATCTAAAT ACTGCTAGTC AATCACAGGT GGCTTATTAT CTTAAAGATT CCGGCACTAA ACTTACGAAC TCGCTTGGGG ACATAACAGG ACATGGAGTG GTTGTTTTTC TTGAAGATGC AGAAATAGAT GATACTATTC CTACGCTAGA CTTGACAACC TCAAGTGATT TAGGAAATGG GAAAATAGTT CTTGCACTAA AAGGAGCCTC AATATTTAAT TATACCAAAG ACATTAAAAC TGGGGATTCT GTAAGTAATC ATTATGCAGT AGCGTTATAT ACTGACAATC AGAATTTATC TTCCGGAATT GCTAATAATC TTACTGCAGG AGCAAATGGA GTTGGAATAT ATGCACAGAA TGGAAGTAAT ATAAAATATT CCGGAACTAT AAATGTAGGA AATAATACAG TAGCAGGAAC CGGAGTATAT ATAGGGACTA ATTCAGGTAT AGGTTCAAGT ATTACTTTAG ATAATGCCGT AATTAATTTA AACGGAGCAG GCGGAATCGG AGCATATGTT GATAATCTTT CCACTTTAAC ATTTCAGGCT AACAGCGTAA TGAATTTTTC CGGTGACGGT GTAGGGATTT ACGGGGTACA GGGAGCAATA ATAAATGATA ATGGCGGAGT AATAAATTCA AATGGCTATG CAGTGGAAAG AACAAGAATA CAGGGCGGAA TTATAAATAT TAATTCTAAT ATCAATGTTT CCGGAGGAAG CATACTCGGG CATGCAGTTA ACGGTGAGAT TAGTGTACTG CCGGGAGCTA TTGTCACAGC ATCGGGAGAT GATGTGATAG GAATATTCGG TGATGGATTA AAAGGAGCAG GAACATGGAC ACAGGCTTAT GAAGCAAACA ATCTGGGGAC AATAGATTTT TCATCTTCTA ATAAAGCTAC TGCAATATAT TTGAATAATG CAAGAGGAGA AAACAAAGGA ACAGTAAAAG TAAATGACAG CTCAATAGCG TTTTACGGTC AGGGTAACGG TTCCGAAATA TATAATAACG GAGCAGTAGA AATTGGAAAT AACTCTGTAG GGCTTTATGG AAATGATATA GATATTATAG AAAATTTATC AGGAGCAGTA ATAAAAGATA AGGGAACGTC TAATACAGGT ATTTACAATA TAAAAACAAC ATCAGGAGCT ACAGCAATAA ATAATAACGG ATTGATAGAA TTAGGAAATG ATGGGGTAGG TATTTATGCA GAAAATTCTG TTATTACAAA TACAGGTAAT ATAATTGTCG GTGATAAAGT AAATAAAAAT TCTCTTGGTA TTTATGCTAA AGATTCTATA CTAAACGATA TCGGAAATGT AAAAGTAGGA AATTCAGGTA TAGCATATTA TGGGGATAAT AGTACCCTAA ATCTAAATGC TGCAAGTGTA GATATTGGAA ATGACGGTGT TTTAGCATAT GGTATAAATA ATACCTTTAT TGATTATAAT CTGGGAAATA AAACTACAAG TGAAAATACT TTTGTGTACC TTATTAACAG CAATGTAGAT TTTAATAATG CTGAGATAAC AGTTGGTAAA AATGGACTTG GGGTGTATCA GGATGGTGCA TCATCGACAT TAGGTTATAA AAAATTATAC GTAAAAGAAA ACGGAGCTGG TATATACGGT TACCAGACAA ATCTTTTCAA TGTCGGGGAT ATAGAATTGA CAGAAAAAAA CAGTGTCGGT ATCATAGCAG AAGACAGTGA TGCAACAAAT AATGCATTAA AAACTATTAA AACTAATGAT TCTAATTCTG TTGGCATATA TTCTGTATTA AAAAATGCTC TGCCGTTAAA AAGTGTAATT AATAATGGTG AAATCAATGT ATCAGGGGAT AAATCAATTG GAATATATGG AAATACATTA AACAGTGCAG GAGCTAGCCT GGGAACAATA GAAATATGGA ATAACAATTC AATAAAATTA GGAAATGCCT CAAATATAAA TAATGCTATA ATTGGTATTT ATGGAACAGA AGGTACTGAG ATTAATACTA ATGCAGTAAG TACAATATTC GGGGGAAGCA ATGTAGTAGG GATTTATTCT GATAACGGGA TAATTGACCA TAAGGGATTA ATAGATGTTC AGGATAATTC AGTAGGTGTA TATGCTTCGG GAGGTACTGC AAATATTGAT AATAATTCTG CTATAAAAGT AGGGAATAAC GGGGCAGTAG CTCTTTACGT AAATGATGGC GGTGTATTGA CTAATAATTC ATCTAATATC ACTGTAGGAA ATGAAAGCAT AATAGGTTAT TCAAAAGATA GCGGAACATT ACTGAAAAAT ACAGGGAATT TATCAGTAGG TACAGAATCG GTGGCATTTT ATTCCAGCAG CGGTGAGATA GAGAACAGCG GAACTTTGAC ATCAACAGGA GACGGAGTAA TATTTTTCTA TGGAAATTCC GGGAAAATTA CAAATTCCGG TGTGATAAAC GGATCAGGAA ATGGTTATGG TGTTGGAATT TATGGGAAAG CAAGTGAGAT AATAAACACA AATAACATAA CTCTTGGAGA TTCAAAAATA GTAAATGCTT CGAACCCTTC TGATTCCAAT AACAGATACT CAGTGGGGAT TTACGGGGAT AGTTCAAAAA TTTATAATGA CGGAAATATC AGTCTCGGTG AAAGCGGGAT TGGGATTTAT TCATACAGAC AGAGTGATGA TCTGATTAAT GACAGTAATG CCTTGATAAC TTCAAATAAA GATAAGGCAA TTGGAATATT AGCAGAAGTG GGTAACGGAA AAAAGGTAAT AAATAAAGGT GAAATAAATT TAAGCGGAAA AGAATCAATA GGAATAGCTT TGAATAATGG GGTAATTTTG GAGAACACAG GTAAAATACA AGTAAGCGGA GATAAAAGTA TAGGTATTAT GGCTACTAAA GATTCCGAAA TTTATAATTC CGGAGTAATA AATGCCTCTG GAAACGAGTC TATAGCAGTG CTGTTAAGAA GTAATTCAAA ACTTGTAAAT ACCGGTATAA TAAACCTTGG AAGCGGGACA CTCGGAGTCG TGGCAGATAA TGACAGCAGC GTCAGCGGAT ATGCAGTTAC GCCTTTGGAA AGTACATCTG TGCAAATTCC AAGTATTGCA AATGTACCTA CTTATAAACC GCCTACAATA GTAAATGCAG GTATAATACA GGTGGGAGAA AAATTTGAAG TACCTTATGA TGGTGTAGTA CAGGTTAAAG TTGATCCTGA TACATTAAGA ACACCAACAT CAAGTGAAGT ATCAACAAGT GATCTGGCAG CTAAATTTTT AGTATCAAGT TCAGTAAAAT TTATTGCTCC GGAATTTAAC GTGAATGATG TAACTGTTAC ATCTGATTTC ACACAAGGAA CAAGTTCCAA GAATTATAAA CTGGCTGATG TATTTATTCC ATCAACTCCT GGCGGAGGAA TTAATTCAGG AATTGCTACT ATTCTGAGTC AGTCGTATAC TTGGGATGCA ACTCCTGTAA CCAATTCTAA CGGAAATGTT GATATATGGA TGCAGAAAAT AGAATATGCT GATTTACTTG ATGGTTATTG GAATGAAGAT TTTGGAAAAG CTCTGGATGA AAAGTATGAA AATGCGAGTG GAGATGCACT TAAAATTTTT AACAAAATTG ACAGACTGGA AAATGAAAAA GATTTTAAAC ATATTATGTC AAGTCTTGCG GGGAATATTT ATGCTAATAT AAATCAAAGA GAGAATGATA TAGCAGGTGT ATTTGAAAAT TCACTTGATT TATTGGAAAG TTCAGAAAAT AATACAAAAG AAAATGTGAA GGTAAATATT ATAGGCGGAA AAGGAAGAAC AAATGAAGAT ACTGACGGAG TAGCAGGATA TGACTATACA ACAGCAGGGG TTTTAGGTTT GAGAGAGGTA GAAAGAACAT ATAAACAGAC ATTCGGCTAT TCACTTGGAT ATTTACACAC AGGGTTTGAA TTTAAAGATA ATAATGAAAG TGAAGAATGG GTAGATACAA TACAAGTAGG AATACATAAT AAATATAAAT CGAATAATTG GAAATTACGT AATGATCTGA CAGGAAGAAT AAGTTTTCAT AATATAGACA GAAATCTGGA CTGGCCTTCA CCTAACAGCA GATCTGAAAT GAACGGCACT TATGAAACTT ACAGTATAAC CAGTGATAAT ATATTAGGTA AAGAAATAAG TCTGGGGAAA AACAGCAGCT TAACTCCTTA TGGCGGATTA AGAGCTATGT ATGTAACAAG ACCGACGTTC AGTGAGAGCG GGCTTGAAGG ACTAGAGGTA GAAGGAAATG ATGCATGGAG CGTTAAACCA AGAGCCGGTT TGGAGCTGCA GACAGCTATT CCTTTAGGTA GTAAAAACGG ATGGCAGTTA AAAGGAAAGC TTGATTTTGC ATATGAATAT GAGCTTGCGA ATTTGAATGA AAAAGAGAAA GCAAGATTAA TTGCTATTGA AGACGGGTAT CATGATTTGG CAAAGCCGGA AGAAGAAAAT GGTCAGTTTA AGACAAGAGC AGCTTTGGGA TTAGAAGTAA ATGAGAGATA CGGAATATTC ATAAACGGAG AATATACTTT CGGAGAACAT AATCAGGATG AATACAGAGC TGGTGTGACA TTAAAAGCAG TATTTTAA
|
Protein sequence | MLKNKKRVLF LLAANSILSA GAYSESISDA KYEKLYNNMV KNIQTGKSNE SNNKLIESIL KKRNKELKDL YAQSDYIVKP EYLEWQIFAS GFYAEKDRGY DSDKYGDGSS QKNSMQVDGT DLRTAKQIQI GATIPIKTVN DFALEPEISI NKKEITVDSI QAPSVIPKTI PTIVIPNVSI PVITAPTVPS TAISTVTAPD IDVLSSVNIP SVNLTSVTTQ NLRINSSNVN IIYSSAGIYN NNIPITLSTS SSAALGITAV SNSSNEIINN SSIIGAANQQ GQVGFGYIPG NVSGAFQSTF STLTNNGSIT MNSKNSAGMI LIPDIDTDPG VNGALADILT GASTPGDTNN VVQKAINNGS ITINGSRSYA FLTSPYYDGT GSLDWSYNFG ITNNGNSAYV SNTNTGTIHV NGDEATGFTI LKGIHQVYNF GSILVGVSSS DNAIGYDTTI KSFTTINGTF VSQSSDGNLS GNNISMVEGA SALYASKAPL EYGCDPSICT GYYKYIGDGQ VLNAAGAVIT IGKNAVESSG IRVEGTGSIQ NRGIIKVIGT GNYGMVATGN GNVINLRDKN GNINVGLDDK YIGIFIQSSR SVGTYVQDSG NITIQGGKVV VGIDENGTKI NDFNNNIIKD SAGIYAKNGN ISILDISFWD TESDYGKVIT NAENTHAVIL TRENSTLSTN FYNQGLINNQ HVNTIGVYVS EGAEVKQENR GYVQSSNGGL DGITTGTYNN AQIISGDGAI GVYAVGTGLS AETRVNIISG KIIGGNSILS PTTATSIGVL GKKNAEITLG NAVNSPDIIM GTNSVSLLIQ DKINLNINNV ISQIGTDSVF GYFDKANGDL KNINKINFQN VGANSILFYM ANNSDVNVDS DFTLTTGGVF PGTTAGFISE NSKISLDTGR IYTTNTAVGL TAQSVNGKTF SDGTVVNINK NKTGAENRGT IIMTSASAVG MYTKYGTSLN NSTGLINIIG TDGIGMYSEE EADIKNSGKI TLNNTGTIGL FGKGNSGTLL GTSTDTVNIV NNGIIELNNA NSVGIYINNN KNGAVVTDAI ISNNATGTTS SFGSTEKNTI NVKGDNSIGI YAPFSIVLQN GNIDLVGTGT VAIYGSNGSN ISGGGNIDLN TASQSQVAYY LKDSGTKLTN SLGDITGHGV VVFLEDAEID DTIPTLDLTT SSDLGNGKIV LALKGASIFN YTKDIKTGDS VSNHYAVALY TDNQNLSSGI ANNLTAGANG VGIYAQNGSN IKYSGTINVG NNTVAGTGVY IGTNSGIGSS ITLDNAVINL NGAGGIGAYV DNLSTLTFQA NSVMNFSGDG VGIYGVQGAI INDNGGVINS NGYAVERTRI QGGIININSN INVSGGSILG HAVNGEISVL PGAIVTASGD DVIGIFGDGL KGAGTWTQAY EANNLGTIDF SSSNKATAIY LNNARGENKG TVKVNDSSIA FYGQGNGSEI YNNGAVEIGN NSVGLYGNDI DIIENLSGAV IKDKGTSNTG IYNIKTTSGA TAINNNGLIE LGNDGVGIYA ENSVITNTGN IIVGDKVNKN SLGIYAKDSI LNDIGNVKVG NSGIAYYGDN STLNLNAASV DIGNDGVLAY GINNTFIDYN LGNKTTSENT FVYLINSNVD FNNAEITVGK NGLGVYQDGA SSTLGYKKLY VKENGAGIYG YQTNLFNVGD IELTEKNSVG IIAEDSDATN NALKTIKTND SNSVGIYSVL KNALPLKSVI NNGEINVSGD KSIGIYGNTL NSAGASLGTI EIWNNNSIKL GNASNINNAI IGIYGTEGTE INTNAVSTIF GGSNVVGIYS DNGIIDHKGL IDVQDNSVGV YASGGTANID NNSAIKVGNN GAVALYVNDG GVLTNNSSNI TVGNESIIGY SKDSGTLLKN TGNLSVGTES VAFYSSSGEI ENSGTLTSTG DGVIFFYGNS GKITNSGVIN GSGNGYGVGI YGKASEIINT NNITLGDSKI VNASNPSDSN NRYSVGIYGD SSKIYNDGNI SLGESGIGIY SYRQSDDLIN DSNALITSNK DKAIGILAEV GNGKKVINKG EINLSGKESI GIALNNGVIL ENTGKIQVSG DKSIGIMATK DSEIYNSGVI NASGNESIAV LLRSNSKLVN TGIINLGSGT LGVVADNDSS VSGYAVTPLE STSVQIPSIA NVPTYKPPTI VNAGIIQVGE KFEVPYDGVV QVKVDPDTLR TPTSSEVSTS DLAAKFLVSS SVKFIAPEFN VNDVTVTSDF TQGTSSKNYK LADVFIPSTP GGGINSGIAT ILSQSYTWDA TPVTNSNGNV DIWMQKIEYA DLLDGYWNED FGKALDEKYE NASGDALKIF NKIDRLENEK DFKHIMSSLA GNIYANINQR ENDIAGVFEN SLDLLESSEN NTKENVKVNI IGGKGRTNED TDGVAGYDYT TAGVLGLREV ERTYKQTFGY SLGYLHTGFE FKDNNESEEW VDTIQVGIHN KYKSNNWKLR NDLTGRISFH NIDRNLDWPS PNSRSEMNGT YETYSITSDN ILGKEISLGK NSSLTPYGGL RAMYVTRPTF SESGLEGLEV EGNDAWSVKP RAGLELQTAI PLGSKNGWQL KGKLDFAYEY ELANLNEKEK ARLIAIEDGY HDLAKPEEEN GQFKTRAALG LEVNERYGIF INGEYTFGEH NQDEYRAGVT LKAVF
|
| |