Gene Sterm_2374 details

Gene Information

• Locus tag: Sterm_2374
• ID: 8597838
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 2525288
• End bp: 2525989
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 38%
• Product: pseudouridine synthase
• Protein accession: YP_003309158
• Protein GI: 269120981

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATTG ATAAATTTTT GGCAAATTCA GGAATTGGAA CGAGGAAGGA AGTAAAGGAG 
CTTTTAAAGA AAAAAAGAAT AAGTGTAAAT GATGAGGTAG TAACAGAAGC AAAAACACAT 
ATTGACGAGG ATAATGATTT CGTAGCCTTT GACGGTAAAA GAATTGAGTT TAAAGAATTT 
TTATATATAA TGCTTAATAA ACCGCAGGAT GTAATATCAG CAACCGATGA TGAAAGACAC 
AGGACAGTGC TTGATCTTCT CGAGGAGCCG CTTACAAAAG TGGGACTTTT CCCCGTAGGA 
CGGCTGGATA AGGATACAGA AGGGCTTTTG GTACTGACTA ACGACGGAAA GATGGCTCAT 
GAGCTTTTAT CTCCGAAGAA GCATGTTCCT AAAAGATATT ATGTCGAATT AAAAAAAACT 
CTTTCAAAAG AGGAGGCCGC AATTCTGGAA AACGGCGTAG AACTGGAAAC CTTTACGACA 
AAGCCTGCAA AGGTGGAATT TATTACTGAG GATAAAGTAT ATATAATAAT TTCAGAAGGA 
AAGTATCATC AGGTAAAACG TATGTTTAAA TGTGTGGGGA ACAGAGTACT TTTTTTGAAA 
CGTACCGGAA TGGGAAATCT CGGACTGGAT GAAAACCTGG CTCCCGGTGA ATACAGAGAG 
CTTACGTCTG ATGAACTGGA ACAGCTGCAG GGTTTAAAAT AA 

 

Protein sequence

MRIDKFLANS GIGTRKEVKE LLKKKRISVN DEVVTEAKTH IDEDNDFVAF DGKRIEFKEF 
LYIMLNKPQD VISATDDERH RTVLDLLEEP LTKVGLFPVG RLDKDTEGLL VLTNDGKMAH 
ELLSPKKHVP KRYYVELKKT LSKEEAAILE NGVELETFTT KPAKVEFITE DKVYIIISEG 
KYHQVKRMFK CVGNRVLFLK RTGMGNLGLD ENLAPGEYRE LTSDELEQLQ GLK