Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2359 |
Symbol | |
ID | 8597823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 2507372 |
End bp | 2514175 |
Gene Length | 6804 bp |
Protein Length | 2267 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003309143 |
Protein GI | 269120966 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA AAAAGTTATT GTTATCATTT TTAGCGCTAT ACTCGATGAC GGCAGCTTAT GCAGAAACTA ACATCAAGGT AAACAGCAAG CTTGATAAGA TATACAAGAA TCTGATGGAT GACAAAGGAG TAAGCGAGAA AGATTACGGT TTTCTGGAAG AAGTCCTGAA TAAAAGGAAT AAAGAACTAA AGGACTTATA TGAACAGTCT GACTACATTG TAAAACCGGA ATATTTGGAA TGGCAGATAT TTTTCAGTGG ATTTTATGAC CATGTAGAAC GTGGAGATAA CACAAAAGCC AATGCAAAAT ATCATTCAGA CCCCGATTAT AACGAAAGCG GAATACAAGG AAAAATTATG CAGGGAACTC AGGTTTCAAA AGAAGTGGAT TTAGGAATCA GAATTCCTAT GAAGGAAGTA AGCAGAGTAC CGCTTTCTCT GGCTATTCAG ACCCCGCCTG TAGTGCAGGT GAACCCGGCT GGGGCAGTTA CTGTGGTACT GCCTAATATT AATGTACCAG TTATTGATGT ACCTGAATTT GAAGAATTTG ATGTTTCAGT GGCTGAATTG ACTGTCAAGA ATATTACCGG ACCGACTATA AGTGTAAAGG GATCAGGGAA TAATGATCGA CAGGCTATAT TGAATTATGA CGGCAACGGC TATATGGCAG GCGGAACTGA CGGTAATCCT AATGCTATTC TGTCACAGCA GCAGTTAACC GGAGCGGGCG GTCAAGGAAG CTTTGATATA ACTATAGATG CAGGCAATAC TATTACCGGA ACTATAGCAA ATACAGATTC TATAGGATGG ACTGATTTAG GAAACTATAC AGGTTACAGC ACATTAGGAG GAACTTGGAA CAATATTAAC AGATATTATG TGATGAAGCT TGTCGGAGGA AGCAAAGGAC TGACTTTAAA AATAGACGAT ATGGATATTT CATATACAGG TTTTCGTGAT TCCTTTACAG ATTCTAAATT TCTGTTTTTT ACTGATTCAC ATAATGGCGG TGAAAATAAA TGGGAAATTG CCGAATCAAC TAATATAACA TTAAAAGGTC AGAATTTAAT AATGTTCGGC GTGCAGTACC ATGGCGGAAC GGCAAATTCA GGTATGGAAA ACAGCGGAAC AATATTGGCA TCTGCAGATG CTGTAACTGG GACAACACCA GGATCAAGAA TTGTTTTTAG CACGATTGAT GACAGAGGCG GCAGCAGTAA TAATGATAAC AGATTCTTAT ATTTTACCAA TACCTCAACC GGGAAAATAA TTTTAGACGG AGCCGGAGAT ATTTTAGGTA ATTTCACAGC TCCGGGAAAT CAGCTTCAAA GTACACCAGC AGGAGGAACA TTATTTACGA ATAATGGCGA TATATCATTA AACGGTCTGG GCTCAATAGG TATAATATTA TCTGAAAAAA GTTCTGAAGA TATTCCTAAT AGAGAAATAA CAAATTTTGG TAAAACTGCA ATAACATTTA CAAAAGCGCT TGAATTAACT GGTGATGAAA CAGTAGGGAT ATATGCACAA AATTCTACTG TCGGAGCATT TGATCCTTCA TTATCATCAA TGAACATAAA TATAGGAACT ACGGGTAATA AAAGCGGCAG CATAGGAAAT GCATCAGGCG GTCTTGCTGC ATATACAGAA AATGCTGCGG GTTTTTATAC AGATGCAGCA AAATTAACAT TGACAATAGG TTCTGGAAAT ACAGCAGCAA CCGGTGTTCA TAATATATTG TTCGGAGATT ATGCAAGAAA CAGTTCTTTA GTGAGAGCAG ACGGCGGGGA ATTAACAATA AAAGGAAATG TTCTTATAAA TAAAGGTGAA AATAATATAG GACTTGCAGC AACCGGTGGG AAAATTACCC TGGATTCTAC GGGTAATCTG ACTGTTTCAT CAGGAAACGG AAATGCAGGG GCATATGTAC AAAACAACGG TACTTTCAAT AATAACGGAA TTATAACTGT GACAGGCGAC GGAACAAACG GAATTATAAC AGCAGCAGGC GGAAGTGCAA CAAATGCCGG GACAATAACA AAAGAAAATA ACGGAGCCGC TGTTGTATTA ACAGGGGGTA ATTTTACAAA TACCGCTGCC GGAAAAATAG AAACAAGCAA CAGTTCGGCG GGAATATATG CTTCCACAGA TGTTTCAGCG AGCACTGTGG TATTAGACGG ACAGGGTGTA ATAGCTAAAA ATAAAGGGAT TGCATTTTAT GCAGGCTATG ACAGCATTAA GAATACTGCC GGAAAAATAA AATTTGGCGG AACAGCTGTG GGGACTATTC AAAGCGGCGG ATTAATGTTT TATAATAATT ATTCATCATC TAACGGAACA GCTGGTGTAA ACTACGGAAG CTTTGTTCTT AATCCGTCAA CATCTGTAGA TGTACAATCA GGCGGAACAG TATTCAAATT TAGTTCTGCT ACTTATAATA CTGCAGATTT TACAAATTAT ATAAATGATA CATTTAACGG AACAATAGGA AATCTGACAA TAAATATGCC GACTTCAGGT AATGGTTACG GGAATCTTTT TGTGCTGGGA AGCTCTGCAA TAGATCTTAC ATCTATGATA TCAACGGCAA ATAATGTATT AACCAGCAGC GGTCTTACAA TTAACGGAAA CTACAGATTT GCACTACTTA CAGATGGTAT TTTTAATATT GATAATAATT CGTCATATGG AACAGCTTCA AATCCATATG ATTTAGATAA TTCTAATAAT CCGATTAATT TAATGAGTGC CGTGAATTCC AAGGTAAATA TTACTTCGGG AACATATATA ACAGGAACTG CCGGCGGACA GAACATAGTA AAGCAAGTCA ATAAAGCAGG GCAGATACAA AGTGATATAG CAGTCGTAAA TGACGGAAAT ATTAATATGA GCGGAACCGA CTCGGTTTCT CTTTATTCGG TATACGGAGA TATTACAAAT AACGGGGCAA TAACAATCTC GAATGATGCT ATAGGAATAT TGGGACTAAA TGATACAAAA ATTCTGAATT CGGGAAGCGG AGTAATAAAT GTAGGGAATA ACAGTGTGGG ACTGGCCGGT GTAACGTACA ACGGAACCAA GACTTCTGCA GTCTTAGGCT ACGGTTCGGA TAAGGCAGAT ATTACCAATG CAGGAAATAT AAGTGATATT TCCGGACAAA ATAAGGCTGT GGGAATATAT GCAGAGAATA GAAATTCTGT AATAAACCGA AATGATGTAC AGGCAGTAAA TACAGGAATA CTTAATTTTA CTAATTCTGC AAACAGTGTA GGAGCATATG TAACCGGCGG AACATTTACA AATACTAATG GTCAGATAAA GGCAGGCAGT AGTAATGCAG GTATTTATGC TGATAACAGT GATATAAACT TTAATTCCGG AACAGTTGAG CTATCCGGTA ACAATGCGGT AGGCTTTTAT CTGGATAATA GCAGTAATTT TAACGGAACT TCGGGAACCA TAAATATTAC CGGACAAAAT GCCATAGTAT TTAATATAAA AGGTACCGGC TCAAATTTTA CCAATAACCT GACAATTAAT TCATCTGCCG GTTCTTCATA TATTGTGGCT AATATAGATT CAGGGCTTTA TCAGACTAAT GCGGTTAATT ATACGCTTGG AGATAACGGA GTTATGTTCT CCGGAATAAA CTCCGCAGTA TTGGTAAGTT CCGGAACAGC AATAACAGGA ACAGGAACTA ATAATGTAGC TTTATATGGA AGCGGTCTTT ATTCAGGAGC ATTATCAGCA CCATATTCTG TAGAATCTGA AAATCAGGGC ATAATTACAA TGGGAGATTC TTCAGCAGGA ATATACACAG TTAATGGAGC AAGAGCTTTA AATACAAATA GTATTGCTGT AGGTAATACA TCAGTAGGAA TGTACGGGGT AAATTCCGGA ATTATTACAA ATAACGGAAT TATAGAAACG GGAGCTTCAA GTCAGGGTAT TTATGCACAA AATACAGGAA CTGTAACTAA TAATAATACA ATAAAAAGTA CAGGTAATAA CGTAATAGGT ATATATGCCG AAGGAAATAT GGATGTAACT AATGCGGCAG GGTCTGAAAT AAATCTTTCA GGAAATGATT CCATAGGAAT TTTCTCAAAA TATACAGCTT CAAGTACTGC TGTACTGACA AATTCCGGAG CAATAAATAT AGGGAATTCT ACAAATATTG TAAATCCGGG GTTAGGAATA TACAGTGAAA ATACAGACGA AAAAATATAT AATACAAATA CAGGGAAAAT AACAGTCGGA ATATCATCAA TAGGTATTTA TAAAGCCGGC TCTGCAGCCG GGCTGGGCTC AGTGGAGCAA GACGGTGAAA TAATTGTAGG TGACGGAGGA ATAGGAATCT ATAGTGACGG AGATACTGTT AATATACACG GAAACTCAAA AATTACGCTA CAGGGCGGAA ATGAGACAGC AGGAGTATAC GGGATAAACG GAGCTAAAAT AGTAAACGGC TCGTCAAATA TGAGCATAGG TTCAGGAAAT TATGGATTTA TCTTAAACAG CGGAGCATCG TTTGAAAATA ATGCAGTTAT GTCATTGGGA AGTAATGAAG TACTGGTATA CTCTGATGGC GGAAGTACAA TTACAAATAA TAACAAAATA AATATGTCTG GTTTTGAGAG TATAGCGGTA TATTCAGTAA ATGGGGAAAC TGTTACAAAT AACAATATAA TAGACGGTTC GGCAGGAATA GGAAATATAG CAGTATATAA TAAAGGCGGC GTAATAAATA ATTCTGGTGA TCTTTATCTA GGGAATTCTG ATATACAAAG CAAAACTAAT ACTTTTATGA ATACTTATGC AGTAGGATTA TACGGGGAAA ATTCTTCGGT AACAAATTCG GGAGACATAT ATGCCGGAAC AGGTGCAGTA GCTTTTTATT CAAAAACAGA TGCAAACCAT AGTACAGTTT CTGTTAATAA AGGGGATATC TATCTGCCAG ACGGTGCTGT GGGATTATAT GCAGAAGGTA AAAATACACA GATAATTAAT GAAAATACAG CTACTATCAC TGTGGCGGGT AATGAAAGCA TAGGAATGGC TGCAGTAGGC GGGGCATTGA TTACCAATAA GGGAACTATT AATATAACAG GAACTAATTC TTACGGTATG TATGGAAATG CCGGATCAAG AGTGGAAAAC TACGGTATTA TAAATGTAGG CGGGGAAAAT AATATAGCAA TACTTTTGGC AAACAGCTCG GAGCTTGTTA ATAATGCAGA AGGAACAATA AATATTCTGA GCGGTTCAAT TAATGGACTG GGATTAACGC AGACAATAAA TTCACTGTAT GAAATACCAA GTATAATAAA TTCAGGAGTA ATAAATGTAA ATGAAAATTT CAGCGTAAAC GGAGTAGAAA TAGCAATAAA AGTAGATCCT GCTACGATAA GAAAAGCAAC TCTTCCTGAA GATGCAGGAG CAAAATTTGT ATCAGATTCG GTAAAATTCA ATGCACCGAC ATTTGAAGTG GATGAAAATA ATCCTGTTAT AGTAACACCG GATTTTACAC AGGGGACAAA TGCCACTGTA TATAAATTAA AAGATGTATT TAATCCTACG ACTCCGGGCG GAGGACCAAA TACCGGAACT GTACCTGTAG TAAGTAAGTC GCTTACATGG GAAGCAATAC CTCAGATAAA CAGTAATGGT AATGTAGATA TATGGATGAA AAAAATTCCG TATGATAAAT TCACAGGCGG TCTGTGGTAT GAAGATTTTG GTAAAAATCT TGATAAAAAG TACGGTGTAG ACGGAATATC ATCAGAAGCT TTAAATATCT TTAACAAAAT AGATTATATA AGCAATGAGG CAGACTTTAG GCATATAATG GCAGGTCTGG CTGGAAATGT ATATGCTAAC TTAAATCAGC GTGAAGAAGA TATAGCAAGA ATATTTGAAA ATTCACTGGA TTTACTGCAA AATTCTAAGA ATAACACTAA AGAAAATGTA AAAATTAATG TTATAGTCGG TGATGGAAAA AGGAAAGAAG ATACGGACGG AGTAGTCGGA TATGATTATA AGGCTACAGG AATTCAGGCT TTGAGGGAAG TGGAGAGAAC CTACAGACAT ACTTTCGGTT ACTCGCTGGG CTATATGCAT ACAGGCTTTG AATTCAATGA CGGAAATAAC AGTGAAGAAT GGGTAGATAC AGTTCAGCTG GGAATACATA ATAAATATAA AGCCAATGAC TGGGTCATGA AAAATGATCT TACCGGAAGA GCAAGTATTC ACAATGTGGA TAGAAATATA GACTGGCCTG TAAACGGAAG ATCAGAAATG GACGGTACAT TTGAAACATA TTCGCTTACT TTTGATAATT CATTAGGGAA AAAATTCAAA ATAGGGAAAA ATTCATCTGT AACACCTTAC GGAGGATTAC GGGCAATGTA TGCTGTAAGA CCTTCATTTA CCGAATCAGG TCTGGAAGCT CTGGAAGTAG ACGGTAATGA TGCATGGAGC GTAAAACCAA GAGCAGGTGT GGAAGTCAAA GGAGAGATGC CTTTAGGACC GAGAGGGTGG AAAGCAAAAG CAACGCTTGA CCTTGCCTAC GAATATGAAC TTGCTAACCT TAATGAAAGA GAAAAAGCAA GACTTGTGGC AATAGAAGAC GGATATCATA ATTTATCAAA ACCCGAGGAA GAAAAAGGGG CTTTTAGAAG TAAAGCTTCT GTAGGTGTGG AGGTAGAAGA GAAATACGGC ATATTCATGA CAGGAGAATA TGTAACAGGA GACAATAATC AGGAAGATTA CAGGGTCGGT ATCAGTTTGA AAGCTGTATT TTAA
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Protein sequence | MKNKKLLLSF LALYSMTAAY AETNIKVNSK LDKIYKNLMD DKGVSEKDYG FLEEVLNKRN KELKDLYEQS DYIVKPEYLE WQIFFSGFYD HVERGDNTKA NAKYHSDPDY NESGIQGKIM QGTQVSKEVD LGIRIPMKEV SRVPLSLAIQ TPPVVQVNPA GAVTVVLPNI NVPVIDVPEF EEFDVSVAEL TVKNITGPTI SVKGSGNNDR QAILNYDGNG YMAGGTDGNP NAILSQQQLT GAGGQGSFDI TIDAGNTITG TIANTDSIGW TDLGNYTGYS TLGGTWNNIN RYYVMKLVGG SKGLTLKIDD MDISYTGFRD SFTDSKFLFF TDSHNGGENK WEIAESTNIT LKGQNLIMFG VQYHGGTANS GMENSGTILA SADAVTGTTP GSRIVFSTID DRGGSSNNDN RFLYFTNTST GKIILDGAGD ILGNFTAPGN QLQSTPAGGT LFTNNGDISL NGLGSIGIIL SEKSSEDIPN REITNFGKTA ITFTKALELT GDETVGIYAQ NSTVGAFDPS LSSMNINIGT TGNKSGSIGN ASGGLAAYTE NAAGFYTDAA KLTLTIGSGN TAATGVHNIL FGDYARNSSL VRADGGELTI KGNVLINKGE NNIGLAATGG KITLDSTGNL TVSSGNGNAG AYVQNNGTFN NNGIITVTGD GTNGIITAAG GSATNAGTIT KENNGAAVVL TGGNFTNTAA GKIETSNSSA GIYASTDVSA STVVLDGQGV IAKNKGIAFY AGYDSIKNTA GKIKFGGTAV GTIQSGGLMF YNNYSSSNGT AGVNYGSFVL NPSTSVDVQS GGTVFKFSSA TYNTADFTNY INDTFNGTIG NLTINMPTSG NGYGNLFVLG SSAIDLTSMI STANNVLTSS GLTINGNYRF ALLTDGIFNI DNNSSYGTAS NPYDLDNSNN PINLMSAVNS KVNITSGTYI TGTAGGQNIV KQVNKAGQIQ SDIAVVNDGN INMSGTDSVS LYSVYGDITN NGAITISNDA IGILGLNDTK ILNSGSGVIN VGNNSVGLAG VTYNGTKTSA VLGYGSDKAD ITNAGNISDI SGQNKAVGIY AENRNSVINR NDVQAVNTGI LNFTNSANSV GAYVTGGTFT NTNGQIKAGS SNAGIYADNS DINFNSGTVE LSGNNAVGFY LDNSSNFNGT SGTINITGQN AIVFNIKGTG SNFTNNLTIN SSAGSSYIVA NIDSGLYQTN AVNYTLGDNG VMFSGINSAV LVSSGTAITG TGTNNVALYG SGLYSGALSA PYSVESENQG IITMGDSSAG IYTVNGARAL NTNSIAVGNT SVGMYGVNSG IITNNGIIET GASSQGIYAQ NTGTVTNNNT IKSTGNNVIG IYAEGNMDVT NAAGSEINLS GNDSIGIFSK YTASSTAVLT NSGAINIGNS TNIVNPGLGI YSENTDEKIY NTNTGKITVG ISSIGIYKAG SAAGLGSVEQ DGEIIVGDGG IGIYSDGDTV NIHGNSKITL QGGNETAGVY GINGAKIVNG SSNMSIGSGN YGFILNSGAS FENNAVMSLG SNEVLVYSDG GSTITNNNKI NMSGFESIAV YSVNGETVTN NNIIDGSAGI GNIAVYNKGG VINNSGDLYL GNSDIQSKTN TFMNTYAVGL YGENSSVTNS GDIYAGTGAV AFYSKTDANH STVSVNKGDI YLPDGAVGLY AEGKNTQIIN ENTATITVAG NESIGMAAVG GALITNKGTI NITGTNSYGM YGNAGSRVEN YGIINVGGEN NIAILLANSS ELVNNAEGTI NILSGSINGL GLTQTINSLY EIPSIINSGV INVNENFSVN GVEIAIKVDP ATIRKATLPE DAGAKFVSDS VKFNAPTFEV DENNPVIVTP DFTQGTNATV YKLKDVFNPT TPGGGPNTGT VPVVSKSLTW EAIPQINSNG NVDIWMKKIP YDKFTGGLWY EDFGKNLDKK YGVDGISSEA LNIFNKIDYI SNEADFRHIM AGLAGNVYAN LNQREEDIAR IFENSLDLLQ NSKNNTKENV KINVIVGDGK RKEDTDGVVG YDYKATGIQA LREVERTYRH TFGYSLGYMH TGFEFNDGNN SEEWVDTVQL GIHNKYKAND WVMKNDLTGR ASIHNVDRNI DWPVNGRSEM DGTFETYSLT FDNSLGKKFK IGKNSSVTPY GGLRAMYAVR PSFTESGLEA LEVDGNDAWS VKPRAGVEVK GEMPLGPRGW KAKATLDLAY EYELANLNER EKARLVAIED GYHNLSKPEE EKGAFRSKAS VGVEVEEKYG IFMTGEYVTG DNNQEDYRVG ISLKAVF
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