| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_2347 |
|---|
| Symbol | |
|---|
| ID | 8597811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 2493337 |
|---|
| End bp | 2494737 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | MATE efflux family protein |
|---|
| Protein accession | YP_003309131 |
|---|
| Protein GI | 269120954 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000304243 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAGAA AGCAAAGTGA ACTGGAAACA GAATCAGTAG GAAAACTTTT GAGGAAATAT
ACTATTCCTG CTTTAATAGG GAATATTGTA ATAGTAGTGT ACAATTTTGT CGACAGATGG
TTTATTGGAC AGTTTATTGG AGAAGAAGCT CTGGCTGCAT CGGGGATAAC TTTTTATCTG
CTCATGGTTT TTATAGCCTT TAGTATGCTT ATAGGAATAG GAGCCGGGAC AATAATATCC
ATACGGCTTG GGCAGAAAAA TATAGAAGAC TCGGAAAAAA TACTGGGAAA TTCTGTTACC
TTGTTTTTTA TAGTAAGTAT TATTCTTACT GTAATATTAT GGTTTAATCT TGATTTTATA
CTTCTGAAAT CCGGGGCAAA TAACGAGACA CTTCCTTATG CAAGAGCATA TATGAGGATT
TTGATACCAA TTTCACTGGC TAATTTTTAT TCTTACGGGC TGAGCAATGT GATGAGAGCT
GCCAATGCTC CGAAAACTGC GATGTTTGCA ATGATAATAG GCGGCGTAGT GAATCTTGTG
CTTGATTATA TATTTGTAGT TCTTTTTCAT ATGGGGATAG AAGGAACAGC TTATGCTACA
CTTATAGGAA ATGTATTATC AGCAGTTTAT GTAATGTATT TCTTTATCAG AGGCAAGCCG
TTATTCAGAC TAAATATGTT CGGAAGGTCT ATTGACGAGG CAAGCATACT AAGATTAAGA
AAAAAACATC TTCCTCTTTC TTATAAGATT TCTTATGATA TTTTGAAAAT AGGAATGTCG
TCATTTTTGC TGCAATCAGT GAATGCAGCG GTGGGTGTGG TTATAAATAA TGTAATCAGC
TCTACGGGAG GAACTACCGG AGTAGCAATA ATGACTATTA TTAATACATA TCTGACACTT
ATTGTAATGT CAGTGTACTC TATAGCTCAG GGGGCACAGC CTATCATAGG TTATAATTAC
GGTGCTAAGA GATTTGACAG AGTTAAGGCT TCATTTAATA TGTCTATAAT TTGGGGACTG
ATAATGTCAG CAGTATTCTT TTTGGTAATA ATGCTGATTC CAAGAGAATT AATTTTATTA
TTTAACAAGG ACAGTAATTC CAATGTTATT CATGATGGTA TAAAAGCAAT GAGAATATAC
TTTATGCTTA TTATTCCAGC TTCTGTGGGT ACAATAGTGC CAAATTATTT CCAGTCTATA
GGAAATGCAC GTGAAGCTAT TATTCTTAAT ATTATGAGAC AGGTATTCAT TTTTATGATA
GTAATGCTTA TTTTTACCAG AATCTGGGGA CTGGACGGAG TATGGTATGC ACAGCCTGTT
ACAGATGTTA TATTTACATT TATTGTAGGG GTATTGCTCG TAATTGAAAA TAAAAAACTT
TCTAAAGAAA TAATGAAATA A
|
|---|
| Protein sequence | MRRKQSELET ESVGKLLRKY TIPALIGNIV IVVYNFVDRW FIGQFIGEEA LAASGITFYL
LMVFIAFSML IGIGAGTIIS IRLGQKNIED SEKILGNSVT LFFIVSIILT VILWFNLDFI
LLKSGANNET LPYARAYMRI LIPISLANFY SYGLSNVMRA ANAPKTAMFA MIIGGVVNLV
LDYIFVVLFH MGIEGTAYAT LIGNVLSAVY VMYFFIRGKP LFRLNMFGRS IDEASILRLR
KKHLPLSYKI SYDILKIGMS SFLLQSVNAA VGVVINNVIS STGGTTGVAI MTIINTYLTL
IVMSVYSIAQ GAQPIIGYNY GAKRFDRVKA SFNMSIIWGL IMSAVFFLVI MLIPRELILL
FNKDSNSNVI HDGIKAMRIY FMLIIPASVG TIVPNYFQSI GNAREAIILN IMRQVFIFMI
VMLIFTRIWG LDGVWYAQPV TDVIFTFIVG VLLVIENKKL SKEIMK
|
|---|
| |