Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2332 |
Symbol | |
ID | 8597797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 2468195 |
End bp | 2475502 |
Gene Length | 7308 bp |
Protein Length | 2435 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003309117 |
Protein GI | 269120940 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA ATAAAAAATT ATTAACTGTT TTAGCATTAA ACTCGCTTGC AGTCGCAGCG GGCAGTGCTC AATCCGGAGT AAATCAGGTA AAGTACGATC AGCTATATAA TAAAATGATA AAAAATGCCG AAACAGGAAA GTCAAATAAA TCAAATTATG AACTGCTTGA AAATATACTT AATAAAAAGA ATAAAGAATT AAAAGATTTG TATTTACAGG GAGACTATGT AGTAAAGCCG GAATATCTCG AATGGCAGGT ATTTTTCAGC GGTTTTTACA GTGAAAAAGA AAGAGGAGAT AATACGCTGG ATAATGCAAA GTACTATGCA TTTCCGGAAA CAGCGGGAAG TTTAAATACA ATAAGTGGAG AAATATATAA CAGTATACTG CAAAGCGGAG TAAGTAACGA TATGCTGCAA AGTATACTAA AAGGAAACAA AGCAGATTAT GAAAAATTGT CGACAAACCA AAAAGAATTA GTTGACAAAT TATTTCAGGG AATGACTTAC AGTACATTAG GAAAATTTAA GCCATATAGA AATGATAATG ATGTTAAAGT AGTGGATTTA GGAATTAGCA TTAATATGAA AGGTGTGGAC AGAGGGATAA CTGATCTTCT GATAACTGAT GTAGCAGTAT CGGATTTAGA GAGCGGAACT CTTGAATTCA CAATGCCGGA TGCACTGGAT ATACCGAATC TGAATATAAC ATCATTTAAT CCGACAATAC CAAATATAAC AACAATAAAC TTTAATTCGA TACCAGTATT AAGTCTGAAT GGTACAGGAG GAGGAAACGG AGGAATAACA GGTTTCTTCC CTTATGGAGA TGATAATGGA TCAAACTCAA TAATATCACA GATGGATATT ACGAGCGGAA CTATAAATGT GAGAACGAAT ATTAACCCAG TGTTGACCTG GTCAACTACA AATCCGGGAT TTTATGACTA TACATTGGAT AATGTAATAG GAACACCATC TGCCGGTCTT GAATATAATC AAAGAGGGAC TTATGACCCT GTATTAGGAA CATGGACCTA TGAAGAGGCA CTGCTACCAA CAGGAATATA TACAAACTCT ATTAATAATA ATCCGCAGGG TGGTCAGGTG CAGGGATTAT TTAAAGTAAT AGATAATCCA ATAACAAGAT TTGGGACTGC AGGCGGGAAT GTTAATGATT TGAAAGTAAC ACTTGAAGGG GATGTAGTAA ATGCAGATTA TTTGGTACAG ATCCTTCACT ATGATGAACA TTACAGCGGT ATGCAGGATC CTGTTACAGG AGAATGGAAA AATTATGCAC TTGATGAGCT GGAGGAAAGA AACTGGATTA CAGCTGCTGA AAAAACAGAA TTAGGGAATA AATTTCTGGA TACTACACTG GGGCATACTA CAGATAATAG ATGGTTTCAG TATGTGGAAA ATAACAGTTC ATGGAATCTG AAAGGCTCAA ATGTCGTAGC GGTAAATCTC CAGGCACACA GCGGATATCA GGATGCCAAC AGTATATTTA TGAACAGGGG AGAAATAATA GGACTTAACG AGGCAAGCAG TACTAATAAC CTTGTAGGGA AGCACGTTGC TTTTATGTTT ACTGAAGGCG GAAGCCAGAG AAAGCAGGAA GGTTTTGATA ATACAGGATT AATAGAAATG AGAGCACCTG AAAGCGTTTT ATTTCTTATG ACAAATAACG CATATTCATA TAGTTACAAT GAATCAAATG ATAGTTATGG AAATAATAAT ATAAGTGATA ATCCGGGAAA ACATATATTA ATGAACAATG GTGATATGAA GCTGTACGGA AATAATAATA TAGGTGTATA CACACATAAT GCCCCGATGA TGAGTAAAAA TGAGTATGCA TATTATTATT CAAATGGAAC ATGGAATGAA TCAAAATCAA TATACAATGG TCTTCAAAGA ACAGAAATCA GACTTTATAA TCCTATAACA TTACTTGGAG ATCAAAGTAT AGGAGTAGAT ATAGAGAGAG AGCTTAACTT TGCCAATTCC AAGATAAAGG TGGATATAGG AACAGAAGAT CCAAGACAGA CAGCAGCAAG CTCGGCAGGA GTGAATGGTC TTGAAAACAG CGGTAATATT GCCGGAGGGA GTTCGGCATA CACAGATAGT GCTGCGGGCA TATATGTAAA TATGGGAAAC AATGTAATGT ATTATTCAAA ATATGTATAT GATCAGAATA ATCCTGCAAA TAATGTGAAT ATAAGCGGAT ATATGGCAGA GAATCCACAG TTTACATTAT CAGACTATCT TCTTAATGTA GGCGAATATT CAAGAGGAGG GGTAGGCCTA AGAGTAGAAG ATTACGGAGA CGTTATTTTA GGAAGTTCCT CGGATACTAC AACAAATCAT GAAATAAATC TATTGGCTGG GAGTGAAGGA AATGCCGGGA TATATTTACG CGGCTCTAAT TCATCAACAG TAACATATGA GCCGGATCCG GTATGGAATC CGGGCTATAC AGAAACAGTT GATTTATTAG GATTCTTAGG TGCAAGAGTA ACAACTGACG GTCTGATAAT GAATATAGAC GGAAATAAAC AGGTCGGAGT CCAGATAGAA GATTACGGAT ATTTTTATCA TAAAAACGGA AATATAAAAG TAAATGGAAC CAATAATACA GGAATTGCGG TAAAAACAGG CGGAACAGGT GAATTAAGCG ATACAGGAAC AATAAATGTA TCAGCCGGAA ACCTTGGTGT ATATAATGAC AGCACATTTA CTATGAATGG CGGGACGATA AATGTTGACG GTCTGGCTTC TGTAGGTGTA TACAGTGAAG CAGGAAATGC AGGGGCTGCT CTTAACAGCG GAACAATAAA ATCTGAAAAC GGAGGAATAG GGCTGTATGC AGGAACAGGA TCTGTAATGA ATCTTAATCA GGGAGTGAAT CTTACAGCAG GAAACAAAGG ACTTTTATTC TATAACTATG ACGGCTCTGC ACTGACAGGG AAATATAATG TTACAGGAAC AGTGGGCGCA ACAGTAGAAA ACGGCGGAAA TGCCTTTTAC ATAAAATCAG GTACTACACT GACAAATTAT CTGAATAATT CATTTATCGG AACGGGAAAT CTTGACTTAA TGTTAAAATC CGGATCAAAG CTGTATATTC TTGACGGTGA AGGCGGAACA TTTAATCTGA CCGCTCTTGA CAGTGTAACA AATGCAGGAG GGGCAATAGG GAATAATGTA ACAATAAATG CAGCAAGTGC CTCGGATTAT ATACCGGTAT CTATGAATAA AGGAACACTG GTATTAGACA GAAATATAAA TATGGATAAC AGCAGTGAGC TATATAAAAG ATCAGAATTT TCATCAGCTT CTGTAAGCCT TGAGAGCGGA AAAATAATAA CAGGAACACA GAATAATCAG ACAGGTATAG CTCAGAGAAA TTATGCCGGC TCATCAGGAG TAGATACAGT AAAAATAACA AACATAGGAA CAGTAGATTT AAGCGGTTCC GGTGCAATAG GCTTAGCTAC AGATTACGGA CATATAATAA ATAATAATAA GGTAAGAACA ACAGGAGATA AGTCGGTAGG AGTGTATTCA GCAAACGGAA CGGTAACCGA AAATAACGGG GATATAATAA CTGGAGGAAC CAGCAGTGCA GGAATATACG GGGTCAATTA TCTTGACGGA GTAACAGATT CATCAGTATT AGGATATGGA AATAATAAAA TAGATATAAC TAATAATGGT AAAATAGTAT CTGAAGGAAC TGGGAAAGTA TATGGAATAT ATGCAGCCAA TAATGCCGTT CCTACAGCAG ATTCCAAAAT AAATCTTGGG AACGGTACAA TAGATATATC AAGTTCAAAA GGCGGAACAG GAGTATATGC AGTAAATACA ACAGTAACAG GAGGAGGAAC ACTTACAGTA GGTTCAGACT CGCTTGGAAT GTATGCAAAG GACAGTAATG TGAACCTGAG CGGTATGACA TTAAATATAA AAGGAAATAA TTCACTGGGA TTTTACCTTG ACGGAACAAC AACTTTTAAT GGAAACGGGA ATATAAATAT AGACGGGCAG AATATAGCAT TATTTAATGT AACTTCAAAC GGGATATTTA ATAATAATTT TACAGTAAGT TCCACAGCAG GGTCTACATA TACAGTAGGT AAAATATCGA ATACTACATT TATATATGAC GGTACATCAT CATTATCTGA AAATGGAAGT TTGATAATGG GAAATAATTC GGCAGTATTG CTGGATAGTA ATTCTAATGT ATCAGCAACA GGCAATAATG TGGTGGCTGT CTCACTGGAC GGTCAGTATA TAGGAACACT GCCGGCAGGA TTTATACCGG ATACAGATGG AGAAAACAGA GGAAATATAA CACTTGGAGA TAACTCAGCA GGATTATACG GGAAAAATGG AACAAGACTG CTGAATTCAG GAAATATAAC TGTAGGAAAC AGCTCACTGG GAATGAAAAC AAACGGAACG GGATCATCAT TGACCAATTC AGGAGCAGTA ACAGCAGGAG CAAATTCTGT GGGAATATAC GGAAAAGAAA CAGATAAAGT AACTAACACG ATGAGCGGAG TGATAAACGG AAGTTCTCCG GAAACAGTAG GAATGTATCT GAATACTTCC AATGCAGGAA CTGTGACAAA TGCCGGACTG ATAGACTTAA GCGGTGATAA GGCAAGAGGA ATACATGCAG AAGGTACGGG AATAAAATCA ATAAATAATA TTGGAACAAT AAGAATAGGT GATTCATTAA ATTCGTCAAA TCCCGGAATA GGAATATACA GTAAAACAGC CGGAGATGTT ATAACTAATA CAGGGACAAT AGCAGTTGGA ATAAACAGCA TAGGTGTATA CAGCTTAGGA GGAACAGTAA ATCAAGATTC TGTGATAACA ACAGGAGGAA TAGGAGTATA TGCAGATTCG GCAGCAGTAA ATCTGAATAC AGGTTCTAAC CTGATAACAG GAGATAATGG TGCAGTAGGA GTATACGCAA TAAATGGAAG TAATGTTGTA AATTCAGGAA CTGCAGCAGT AGGAAACGGA AGCTATGGTT ATGCTTTGAA ATCGGGATCA AATCTGACAA ATAATTCACA GGCAGCTGTA GCGGATAACG GAACATTTGT ATATGGAGAC GGTGCCGGAA CTATAAGCAG CAGCGGAGAT GTAATATTAA CAGGCTCAGA TTCATTCGGA TTTTATACGG TAAACGGCGG AGCTATAGCA AACAGCGGAA ATATAACAGG TGATACAGGA GTATCTAATA TAGCAATTTA CAATAAAGAT GGAAGTATAT ACAATACAGG AAATATAACA GTAGGAGATT CTGTAATACT GGATACGATG AATACTGAAA ATAACAGATA TGCCGTAGGG ATATACGGAA AGAATTCACA GATATATAAC AGCGGAGATA TAAAAGTAGG ATATTACGGA GTAGGAATTT TTGGTTCGGA AAGTAATGTA GAAAATCACG GTAATATAAT ATCAGATGCA GAGGGAGCAA TAGGGCTTTT CATAGAGAAC GGTACACTTG ATAATTATGG AAATGTAACA TTAAGCGGAA ACAGCTCAAT GGGAATTTAT GCAAATAAAG GAGCAACAGT AACAAACTAC GGAATAGTAA CGGTAAACGG GGATTCCTCA CAGGGTGTAT ACTTAAATCT TGCTTCAACA CTTGATAATC AGGGTACGAT AAATATAAAC GGAAATAACA GTCAGGGAGT ACTTCTAAAA GGAGAAGGTA AATTAGTAAA CTCCGGAACA ATAAACTTAG CATCAGGACT GGTAAATTCG GAAACGGTAT CTTACGGAAC AGCAAGCAGT TATCCGGTGC CAAGTATAAT AAATGCAGGT GTAATAAATG TAAGCGAGAA TTTTGAAACA AACGGTCTGG ATATATCAAT AAAAGCAGAT CCCGATTCAA TGAGAACAGC AGAAATAATG GAGGATATGG GAGCAGCCTT TGTATCAGAT GCAGTAAAAT TTTATGCGCC AAGCTTTAGT ACAACAGATC CTATAAATAT AATGTCAGGA TTTGCAGCAG GTACTCATGC GGAAACATAT AAACTAAAAG ATGTATTTAA TCCCACAACA GAAGAGGGAG GACCAAATTC AGGACTTGTA AAGGTAAAGA GTAAATCACT GACATGGTCA GCAACACCGG TAATAAACAG CAGAGGAAAT GTAGATATCT GGATGCAGAA GATACCGTAT GACGAGTTTA CAAGCGGTTT ATGGTTTGAA GACTTCGGGC TGGCTCTGGA TACAAAATAT GCAGGCTCAG CAGGAAATGC CGGACTGATA TTTGATAAGA TAGATACAAT AGAAACAGAA TATGATTTCA GAAGAACGAT GTCAAACCTT GCAGGTGACA TATATGCAAA TATGAACCAG AGAGAAGAAA CAATAGCAGA TGTATTTGAG AGTTCTCTGA ATCTTCTGCA AAATTCAAAG AATAATACAA AAGAAAATGT AAAAATAAAT GTACTGGCAG GAAAAGGAAG CGTAAAAGAA GATACAGAAG GAGTAGTCGG ATATGATTAT GAAACTGTAG GAGCCTTGGC ACTAAGGGAA GTAGAGAGAA CTTACAAGCA TACATTCGGT TATTCAGCTG GATATTCACA TACGAACTTT GAATTCAAAG ACGGTAATAA CAGTGAGGAA GATGTAGATA CTGTTCAGTT AGGATTACAC AGCAAATATA AGTCGAATGA CTGGATATTA AGAAATGACC TGACAGGAAG AATGAATCTG CATAATGTGG ACAGAAATCT GGATTGGACA AATGCAGGAA GTTCAAATAT GAGCGGGAAT TATGAAACTT ACAGTATAAC AAGTGATAAT AAATTAGGAA AGGAAATATC ACTGGGAAAA AGAGCAAGTG TAACACCTTA CGGAGGATTA AAAGCTATGT ACACAACAAG ACCGACATTC AGCGAGAATG GTTTGGAAGC ACTGGAAGTA GAAGGAAATG ATGCATGGAG TGTAAAACCA AGAGTCGGGG TAGAGCTAAA AGGAGAAATG CCGCTAGGAA GCAGTGAAAG CTGGAAACTA AAAGGAGCAG TAGATGTGGC TTATGAATAT GAGCTTGGTG ACCTGAATGA GAGAGAATAT GCAAAGCTTG TAAATGTAGA GACAGATTAT CATAAGCTGG CAAAGCCGGA GAAGGATAAA GGCCAGATAA GAACAGGAGC TTCATTAGGT GTGGAAGTAG AAGACAGATA TGGAATTTTT GTAACAGGAG ACTACAGAGC CGGAAATGAC AAACAGGATG ATTACAGAGT GGGAGTAACA CTTAAGGCAG TATTTTAG
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Protein sequence | MKRNKKLLTV LALNSLAVAA GSAQSGVNQV KYDQLYNKMI KNAETGKSNK SNYELLENIL NKKNKELKDL YLQGDYVVKP EYLEWQVFFS GFYSEKERGD NTLDNAKYYA FPETAGSLNT ISGEIYNSIL QSGVSNDMLQ SILKGNKADY EKLSTNQKEL VDKLFQGMTY STLGKFKPYR NDNDVKVVDL GISINMKGVD RGITDLLITD VAVSDLESGT LEFTMPDALD IPNLNITSFN PTIPNITTIN FNSIPVLSLN GTGGGNGGIT GFFPYGDDNG SNSIISQMDI TSGTINVRTN INPVLTWSTT NPGFYDYTLD NVIGTPSAGL EYNQRGTYDP VLGTWTYEEA LLPTGIYTNS INNNPQGGQV QGLFKVIDNP ITRFGTAGGN VNDLKVTLEG DVVNADYLVQ ILHYDEHYSG MQDPVTGEWK NYALDELEER NWITAAEKTE LGNKFLDTTL GHTTDNRWFQ YVENNSSWNL KGSNVVAVNL QAHSGYQDAN SIFMNRGEII GLNEASSTNN LVGKHVAFMF TEGGSQRKQE GFDNTGLIEM RAPESVLFLM TNNAYSYSYN ESNDSYGNNN ISDNPGKHIL MNNGDMKLYG NNNIGVYTHN APMMSKNEYA YYYSNGTWNE SKSIYNGLQR TEIRLYNPIT LLGDQSIGVD IERELNFANS KIKVDIGTED PRQTAASSAG VNGLENSGNI AGGSSAYTDS AAGIYVNMGN NVMYYSKYVY DQNNPANNVN ISGYMAENPQ FTLSDYLLNV GEYSRGGVGL RVEDYGDVIL GSSSDTTTNH EINLLAGSEG NAGIYLRGSN SSTVTYEPDP VWNPGYTETV DLLGFLGARV TTDGLIMNID GNKQVGVQIE DYGYFYHKNG NIKVNGTNNT GIAVKTGGTG ELSDTGTINV SAGNLGVYND STFTMNGGTI NVDGLASVGV YSEAGNAGAA LNSGTIKSEN GGIGLYAGTG SVMNLNQGVN LTAGNKGLLF YNYDGSALTG KYNVTGTVGA TVENGGNAFY IKSGTTLTNY LNNSFIGTGN LDLMLKSGSK LYILDGEGGT FNLTALDSVT NAGGAIGNNV TINAASASDY IPVSMNKGTL VLDRNINMDN SSELYKRSEF SSASVSLESG KIITGTQNNQ TGIAQRNYAG SSGVDTVKIT NIGTVDLSGS GAIGLATDYG HIINNNKVRT TGDKSVGVYS ANGTVTENNG DIITGGTSSA GIYGVNYLDG VTDSSVLGYG NNKIDITNNG KIVSEGTGKV YGIYAANNAV PTADSKINLG NGTIDISSSK GGTGVYAVNT TVTGGGTLTV GSDSLGMYAK DSNVNLSGMT LNIKGNNSLG FYLDGTTTFN GNGNINIDGQ NIALFNVTSN GIFNNNFTVS STAGSTYTVG KISNTTFIYD GTSSLSENGS LIMGNNSAVL LDSNSNVSAT GNNVVAVSLD GQYIGTLPAG FIPDTDGENR GNITLGDNSA GLYGKNGTRL LNSGNITVGN SSLGMKTNGT GSSLTNSGAV TAGANSVGIY GKETDKVTNT MSGVINGSSP ETVGMYLNTS NAGTVTNAGL IDLSGDKARG IHAEGTGIKS INNIGTIRIG DSLNSSNPGI GIYSKTAGDV ITNTGTIAVG INSIGVYSLG GTVNQDSVIT TGGIGVYADS AAVNLNTGSN LITGDNGAVG VYAINGSNVV NSGTAAVGNG SYGYALKSGS NLTNNSQAAV ADNGTFVYGD GAGTISSSGD VILTGSDSFG FYTVNGGAIA NSGNITGDTG VSNIAIYNKD GSIYNTGNIT VGDSVILDTM NTENNRYAVG IYGKNSQIYN SGDIKVGYYG VGIFGSESNV ENHGNIISDA EGAIGLFIEN GTLDNYGNVT LSGNSSMGIY ANKGATVTNY GIVTVNGDSS QGVYLNLAST LDNQGTININ GNNSQGVLLK GEGKLVNSGT INLASGLVNS ETVSYGTASS YPVPSIINAG VINVSENFET NGLDISIKAD PDSMRTAEIM EDMGAAFVSD AVKFYAPSFS TTDPINIMSG FAAGTHAETY KLKDVFNPTT EEGGPNSGLV KVKSKSLTWS ATPVINSRGN VDIWMQKIPY DEFTSGLWFE DFGLALDTKY AGSAGNAGLI FDKIDTIETE YDFRRTMSNL AGDIYANMNQ REETIADVFE SSLNLLQNSK NNTKENVKIN VLAGKGSVKE DTEGVVGYDY ETVGALALRE VERTYKHTFG YSAGYSHTNF EFKDGNNSEE DVDTVQLGLH SKYKSNDWIL RNDLTGRMNL HNVDRNLDWT NAGSSNMSGN YETYSITSDN KLGKEISLGK RASVTPYGGL KAMYTTRPTF SENGLEALEV EGNDAWSVKP RVGVELKGEM PLGSSESWKL KGAVDVAYEY ELGDLNEREY AKLVNVETDY HKLAKPEKDK GQIRTGASLG VEVEDRYGIF VTGDYRAGND KQDDYRVGVT LKAVF
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