Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2321 |
Symbol | |
ID | 8597786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 2456826 |
End bp | 2457668 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_003309106 |
Protein GI | 269120929 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.411496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGGAA TAATTTTGTT AAACAAAGAA AAAGATATAA GCTCATTCAA AGCTATAAAT AATCTTAAGT ATAAACTGAA GCTGAAAAAG GTAGGACATG CTGGAACGCT TGATCCTCTG GCGGAAGGAC TTATGATAGT GCTTGTCAAT AATGCTACGA AGCTTTCGGA TATGCTTTTG AAACAAAGCA AGGAATATTA TGCTGAGTGT GAACTGGGTT ATGAAACAGA TACATATGAC TGCACGGGAG AAAAAACTCA GGTTTATGAT GGTGAAATTT CGGTTGATAA AGAAAAAATA ACAGACATTC TTGAAGATTT TCAGGGAGAA TACGAACAGA CACCTCCGAT GTACTCGGCT ATCAAGATAA ACGGAAAAAA GCTCTATGAC CTTGCGAGAA AGGGAATAGA AGTAGAGCGT AAAAGCAAAA CTGTAAATAT AGAATATATA AACAGAATAA GTATAAATGG GAATAAAATA GGGTTTTATA TACATGCGGG AAGCGGGACT TATATACGGT CTGTAATTCA GGATTTCGGA AGACGGCTCG GGACTTATGC GACAATGACT AAGCTGATAA GAACAAAGAT AGGTAAATTT TCACTTGAAA ATGCATACAG GGAAAAAGAA ATATCAGATG ATTCTGTATT ATTAAGCGTA GAAAAGATAT TCGATTATCC TGCACTTGAT GTTACAGATG AAGAATGTTT TAAGATGAAA AACGGGATAA AACTGAATAA AGAAATTCCG GTGGGATACT ACAGCATTTA TAATAACGGG GAATATAAGG GGATAGGTAT ATCAGCCGAC GGGATACTGA AAAGATTCAG ATATTTTAAC TGA
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Protein sequence | MDGIILLNKE KDISSFKAIN NLKYKLKLKK VGHAGTLDPL AEGLMIVLVN NATKLSDMLL KQSKEYYAEC ELGYETDTYD CTGEKTQVYD GEISVDKEKI TDILEDFQGE YEQTPPMYSA IKINGKKLYD LARKGIEVER KSKTVNIEYI NRISINGNKI GFYIHAGSGT YIRSVIQDFG RRLGTYATMT KLIRTKIGKF SLENAYREKE ISDDSVLLSV EKIFDYPALD VTDEECFKMK NGIKLNKEIP VGYYSIYNNG EYKGIGISAD GILKRFRYFN
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