| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_2310 |
|---|
| Symbol | |
|---|
| ID | 8597775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 2443102 |
|---|
| End bp | 2445411 |
|---|
| Gene Length | 2310 bp |
|---|
| Protein Length | 769 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_003309095 |
|---|
| Protein GI | 269120918 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA AACCATTTAT TGCAACTAGA GACTTAGTAG TTTTTCCCGG GGTAGTAACT
CCGATATTTG TGGGGCGTGA GGCAAGTCTG GCAAGTTTGG AAAAAGCAAT TTCCAAATAT
AATAACAAGC TTATCTTGTC GACACAGAAA GATCCCAATA TGGAAGAACC AAATTTTCCG
GAAGATATAT ACAGTATAGG AGTGTTGGTT CATATATTTC AGACTGTAAA AATGCCTAAT
GGAAATGTAA AAGTACTTGT AGAAGCTAAA CACAGAGTAT TGATTAAAGA GGTAATGGAA
GAAGACGGAA TTTTTTATTC CGATTATGAA GATATTTTCT CGAAACCAAT AGAAGAAACA
AAAGCAGAAG CATTGAAAAG AAAAGTAATA GAAGAATTCG AAAATTACGC AAAAATTACA
GGAAGAATTC TTCCGGATCT TATTTATAAC CTGAAAGAGA TCAAGAATAT AGACAAAGCT
TTTGATCTGA TATGCACAAA TCTGCTGATA GAAACAAAAA TAAAACAGGA ATTGCTTGAA
ATTCTTGATA TAGAACAAAG AGCGTATAAA ATTCTAAGTA TTCTTGAAAA GGAAATAGAA
ATTTTCTCGC TGGAAAAAGA TATAGAGAAT AAAGTTAGGG AACAAATGGC CGAAGTACAG
AAAAATTACT ACCTGAGAGA AAAAATTAAG GCCATGAAAG AGGAAATGGG AGATGATACT
GATTCTGAGG ATGAAGTGGA AGAGCTTGCA GAGCGTATGG AGGAATCAGG AATTCCTATT
GAACTAAAAG AGAAGCTCAG AAAAGAAATT TCTAGAATGA AAAAAATGCC TGACTATTCT
GCAGAAGCAT CTGTTATAAG ATCTTATGTA GAAACAATAC TGGATATACC ATGGACAACA
TCAACAGAAG ACAGCATCGA AATAGAAAAG GCAGAAAAAA TATTAAACGA GGATCATTAT
GGTCTTGAAG AAGTAAAAGA AAGAATTCTT GAATTTCTTG CAGTAAAAAA ATTAAATAAT
AACCTCAAAG GCTCAATTAT TTGTCTGGTT GGACCTCCGG GAGTGGGAAA AACCTCTCTT
GCACATTCTG TAGCAAGAGC CATGGACAGA AAATTCGTAA GAATTTCCCT TGGCGGTGTA
AGAGATGAAG CGGAAATAAG AGGACACAGA AGAACATATA TAGGATCAAT GCCGGGGAGA
ATTATAAGTG CCCTGAAGCA AATAGGCGTT AATAATCCTG TAATGCTGTT TGATGAAATA
GATAAAATGG CTTCTGACTT TAGAGGGGAT CCTTCATCAG CAATGCTGGA AGTTTTGGAT
CCTGCACAAA ATAATACATT TGAAGATCAT TATGTAGATG CGCCTTTTGA TTTGTCAAAA
GTGTTTTTCA TAACTACGGC AAATGATCTT GGCGGAATTC CAGGCCCTCT CAGAGACAGA
ATGGAAATAA TCTACATTGA ATCTTATACT GAATTTGAAA AACTTAATAT AGCGAAAAAA
TATCTTATAC CTCAGACTCA GGAAGAAAAC GGACTTAAAG ATTATAAGGT AGATTTCGAT
GATGAGGCAA TATTTAAGAT AATAAATGAA TATACAAGAG AAGCCGGAGT AAGAAACCTT
CGCCGTGAAA TAAGCAAGGT TTTCAGAAAA GTGGCTAAAG AAGTAGTGGA TAAAAGAAAA
GCCAAGATAG TAATAAATAA AAATAAAATA AAAAATTATC TTGGAAATGC CAAATTCAGA
CCTGATAAAA TAAGAGAAAA AGAAAGTAAG ATCGGGGTAG TTAACGGTCT TGCATGGACA
TCTGTAGGTG GGACAACTCT TGAGGTTCAG GCTGTAAAAA TGGAAGGAAA GGGTAATCTG
TTGCTTACAG GTAAGCTGGG AAGTGTTATG CAGGAATCTG CAAAAGTAGC TTACTCTTAT
GTGAGATCAA TAAAAAATAA ACTGAAAATA AAAGACAAAT TTTATGAAAT GGATGATGTG
CATTTACACT TTCCAGAAGG TGCTGTTCCG AAAGACGGAC CTTCAGCAGG GGTAACTATT
ACAACTGCAA TTATATCTGT TCTGACTAAT AAAGAAGTAA GACAGGATAT AGCAATGACC
GGTGAGATAA CTATAACCGG CGAAGTACTC GCAGTAGGCG GTATTAAGGA AAAAGTAATA
GGTGCACACA GAGTGGGAAT AAGAGAAGTA ATTCTGCCGT TTGATAATAA AATAGACACA
GAAGAACTTC CACAGGAAAT AAAAGATGAT ATGAAATTTT ATTTTGCAAA AGTTTATGAT
GATGTAAAAA AAATAGCTTT CAAAAAATAA
|
|---|
| Protein sequence | MIKKPFIATR DLVVFPGVVT PIFVGREASL ASLEKAISKY NNKLILSTQK DPNMEEPNFP
EDIYSIGVLV HIFQTVKMPN GNVKVLVEAK HRVLIKEVME EDGIFYSDYE DIFSKPIEET
KAEALKRKVI EEFENYAKIT GRILPDLIYN LKEIKNIDKA FDLICTNLLI ETKIKQELLE
ILDIEQRAYK ILSILEKEIE IFSLEKDIEN KVREQMAEVQ KNYYLREKIK AMKEEMGDDT
DSEDEVEELA ERMEESGIPI ELKEKLRKEI SRMKKMPDYS AEASVIRSYV ETILDIPWTT
STEDSIEIEK AEKILNEDHY GLEEVKERIL EFLAVKKLNN NLKGSIICLV GPPGVGKTSL
AHSVARAMDR KFVRISLGGV RDEAEIRGHR RTYIGSMPGR IISALKQIGV NNPVMLFDEI
DKMASDFRGD PSSAMLEVLD PAQNNTFEDH YVDAPFDLSK VFFITTANDL GGIPGPLRDR
MEIIYIESYT EFEKLNIAKK YLIPQTQEEN GLKDYKVDFD DEAIFKIINE YTREAGVRNL
RREISKVFRK VAKEVVDKRK AKIVINKNKI KNYLGNAKFR PDKIREKESK IGVVNGLAWT
SVGGTTLEVQ AVKMEGKGNL LLTGKLGSVM QESAKVAYSY VRSIKNKLKI KDKFYEMDDV
HLHFPEGAVP KDGPSAGVTI TTAIISVLTN KEVRQDIAMT GEITITGEVL AVGGIKEKVI
GAHRVGIREV ILPFDNKIDT EELPQEIKDD MKFYFAKVYD DVKKIAFKK
|
|---|
| |