Gene Sterm_2290 details

Gene Information

• Locus tag: Sterm_2290
• ID: 8597755
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 2418015
• End bp: 2424704
• Gene Length: 6690 bp
• Protein Length: 2229 aa
• Translation table: 11
• GC content: 38%
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_003309075
• Protein GI: 269120898

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.638586
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA ATAAAAAATT ATTAGTATCG TTTCTGGCAT TAAATGCAAT GGCATCGTCT 
TATGCGCCTG CATCAGGGAT ATCTTCGGCA AAATATGACA GAATGTATAA TAGCATAGTA 
AAAAATATGG AAACCAGTAA ATCGAATGAA AAAACTTACC AAACAATAGA AAAAATACTT 
AAGCAAAAAA ATAAAGAATT AAAAGATTTA TATTTACAGA ATGATTACAT AGTAAAGCCT 
GAATATCTCG AATGGCAGGT ATTCTTTGCG GGATTTTATG ACGAATATAA TGAGGGCAGG 
GATAACAGTT CGGAAAATGC ATTGTATCAT TCAAAAGTAA CAGGATATTA TGACACAACA 
GGCAGCCATA TAGTAACAAG CGGCTTCAAA GACGGTACAG CCGGAAAGCC ATATAAGGAG 
CTTCAGCAGC CGAAGGAAAT AAATCTGGGG GTAAATATTC CAATAAATGT AACAAACAGA 
AATTTTTCGG ATTTTAATGT CAAACCAAAT TCAGGTCCGA CTGTATCCGG AAGCTTTAAT 
ACAGTAATAA TTCCATCACC GTCACTTACT CCTTTGGTAT CAATGAGTAA ATTCCAGCCG 
GCTGAATTAG ATGTAAACAT AACACCGCCT TTTTCAGTAC CGCAGCTTTC GTTTCAGGTT 
ACGGGATTTA TACAGGGAAC TTCTTCTGCT TTCAGGACGA CAACAACTTC TGATGTTATG 
ATAGATAATT ATAAAGAAGT AATTGCAGAT TCACTGACTA CTTTGATAAC AGGTCCCGGC 
GGTAGTTTTT CAGGAAATAT CAGATACGGG AATGGAGCAT TGACGACATG GAACAGTACA 
GTAGCCAGAA CAGGTGTTCC GCCGGCTTTA TACAGCAGTG TAATAAATCA AAGCGTAACC 
ATAAAAGGAG ACTGGCAGAT AGATCATACA ATAGCCGGAC AGACAAGATT TGTCAGTTAT 
AATCCATATG CAATCAGTAC GACACAGTAT CTGGATTTTT CCGGCAATCT GGAACTTAAT 
AATACAGGAG GCGGTTATCT GATTGGTCTG GAACATCAAA TACTGGCAGG ATTTTCTTCG 
CCTATTCCCT CAACAACTTA TTCCATGCTT ATAAACAGCG GGAATATATA TCTGAATAAC 
GGTACACAGA TGATAGGAAT AACCTTGGAA AAAGAATTTG CATATGGTGA TTTTGGTACG 
CCGTCTCAGA CCTATAATCT CGGGAAAATA ATATTGGGCA GTAACAGTTC CAACAGTATA 
GGTATAGATT TCGGCGCTTA TAATGACGGA CCCCTGAATT CGGATATGTA TACGGGAGAT 
ATTGAAATAA ACGGAACAGA AAATTACGGA GTAAGAGTTT ATGATATTTT TTCCTCTTCA 
CAAAATTATT TTGATAATGT AAGAATTCAC GGGGAGAAAA GTGATTCCGG GAAATACGGA 
GCCGGGGGAG ACGGACTTAT AAATATCAAG GGAAATAAAA ACATAGGATT ATCATTATCC 
AAAAAAATAG GTGCTGTGGG TTATGTTGAC AATATAAGCA ATCTGAATTT ACGGGTTGAT 
GGTGAGCAGA ATGTGGGAAT ATTAAGAAAT TCTTCTTTTG CTGTTTTGCA AACCAATGAT 
ATAGAGCTGA CAGGTATACA GATAAAATCC TTAACTTATG GTGATGACTC AATAGACAGT 
ATTCTTGTGC GTAGTGACAG ATATACAACT ATAATTGATG CAAGCGTGGG AGCCAGAATA 
GGTTCTTATG ATACAGGAGT AACAACACTG GGCGGAGTTA TAACAAACGG TATTGATAAT 
ATATTATTTA TGGCAAACGG AACTGGACAG TCCGCCTCTC AGGTAGGAAA AATAGTGAAT 
AATGCAGACA TAACTATAAC CAATACTGCT AAAAATGCAA AAGGACTTGT GGCATATAAC 
GGCGGCTGGG TAACTAACAG CGGAGTCATT ATTAATAATT CGGAAAGAGT AAAACCCATA 
GGTTCTAATG ATGCAGGGGC TGTAGGAATG TCAGTATTAG GCTCTGCCAG TCAGGGAACG 
AACTCTTCCG CTGGAAAGCT CCTGCTCCAA AATACTTCCA CGAATCTGTC AGCAGGGGTA 
TATAATGAGG GGACGTTTGT TAATGCAGGA GAAATAGAGG TTTACGGGGA TAAAGGAATC 
GGGGTATATT CTAAAGGAGC TGCAACGAAT ACGACTCTTT CCAATAAATT AACTGTAAGC 
GGAGATAATT CAATAGCACT TTTTTCCGAT GGTGTGGTAA GTTCAAATTT TAAAATCGGG 
GGACTGGTTT TAAATGTAAG CGGAACTGAT GCATATGCAT TTTATTCAAA GAACGGCGGC 
GGTTATAGTA TTACCGGGAA TACAGCAGTA AATGTCGGGG CGGGCAGTAT TGGATTTCAA 
TATGTAGGAA GCGGATTAAA TGCTCCTATA AATCCTGCAG ATATAACTAA TATGTTTAAT 
TCCGCCGGGG GAACTCTTAC ATTTAATCTA AATCCGAATT CATATGCAAT GGTAATTCAA 
AATGCAAAAA TAAATATTTC GGATCTGGGA ACTTTTACTT CAATAATGTC GGCGCATGTT 
GTCATGTCAG GATCAGATAA AGCAAAAGTC TATAAGGGCC ATCTGGAAAT TGATGAAGAT 
TCAAGCATTG ATTCTGGTGC GGTAACTAAT GTCAAATACA GGGATTTGCT TGTTGCTTCT 
TCAAGAATAA CACTTGGCAG CGGAAAAACA TTAAGCGGGA CAGAAGCAGG TCTTATAGGA 
ATTGGTCAGG AAAATGACAG TATAGCCGGT ATAACAAACA CAGATATGAG TATGACAAAT 
AACGGGACAA TAGTACTTAA CGGAGTAAAT TCAACCGGAA TGTACGCCAG CTACGGATCA 
TTAAATAATG CTGCCGCCGG AATAATAAAA GTATCCGATA ACGGGGTAGG CTTATATGGA 
ACTAATGGGA CAATAACAGA AAACTACGGA AAAATAGAAT TCGGCGATAA CGGAATTGGA 
GTGTACGGAA CAAATATAAC TCCGGGCTCG ACACCAACTT ACGGAACAAA AAATATATCA 
GTAACAAATT TCGACAGTAT AAAATCTACT GGTATAAATA AAGCCTATGG AATAGTAGCA 
GATAATGACA ACAGCGGAAG CTCGCATATA ACACTGAATT CAGGTTCTAT AATTGATTTA 
AGTTCTGTAA CAAATGCTTT GGCAGGAGAT CTTGTCGGAG TATATGCTAA AAATACCATA 
CTGAATTCAG CGGGAGACAT CACTGTGGGC AAAAACGGAA TAGCCGTATA TGCCGAGGAC 
AGTAATGTAA CATTAACAGG GGGAACTATA AATATAACAG GGGATAATGC ACTTGGCTTT 
TATCTGAAAG GCTCAACGGA TTTTAGTGCA GCAGCAGGGA CAACAGTAAA TGTATCAGGA 
CAGGGAGTAA CAATATTTAA TTTAAATACA AATCCCGGAA TGATATTTAA TAATCTGATG 
ACGATTAATA CCAGCGGTTC CGGAACTTAT ACACTTGGAA GTATTGCAAA CGGTACATAT 
TATTATAATG ATTCTGTGGC GCTCAGCGGG AACGGTGCTA TGATATCAGC CAAAAATTCC 
ATGGTATTAT TTGACGGAGG TGCAAATGTA AGTACTACAG GCAATAATAA TATCGGCATA 
TATGTGGATG GTATTTATAC ACTTCCTGTA CTGCCGGGAT TTACAGCAGG AATAGAAGCT 
GAAAACAGAG GAACAATTAC ATTAAATAAT TCATCAGCCG GCTTATATGC TATAGGGGGG 
ACCAGTGCAT ATAATAACGG GGGTGTAATA AGTGTAGGAA ATGATTCTAC TGCAATATAT 
GCCACAGGAA GTACATCAAA TGCCCTAAAT AGCGGAACTT TAATTATAGG ATCAGACTCT 
CAGGGGATTT ATCTAAAAGA CGGCCAGACA GCAGATAACA GCGGAATGAT ACTTAGCAGG 
GGGAACAGAG CAGTGGGTAT CTATACTGAT AATGTAGTAA ATCCGATAGT AAATAATAAT 
TTGATAGATT TAAGCGGTAA TAAGTCAATA GGTATTTATG CGGTAGGGCC GGCCAAAACA 
TTGATAAATA ACGGAACGGT AAAAATCGGG GACTCTTCTG ATGTAAATGA TCCGGGAATA 
GGTATTTATA CAGCGGCTCC GGGTGATATT ATAACGAACA ACGGCATCAT AGATACCGGA 
AACAAGTCGA TAGGTATTTA TGCAGAAGGT GCAGCAGTGA ATCAGTCCGG GACTTTTGTA 
ATAGGTGAAA CAGGAACAGG AATTTATACA AAAGGCGGAA TAGTTACTCT TGGAGCCGGA 
AGTACAATAT CAGTAGGACA GAATGAAGCA ATCGGGGTAT ATGGAACAAA CGGGACTGCA 
ATACATAATA ACAGTGCAAA TTTATCAGTA GGCAACGGCG GATATGGATT TGTACTGGAA 
ACAAATTCTA CCCTTAACAA TAATAATATA ATAAATCTTA ACGGAAAAGG AACAGGAGTA 
TATTCAGACG GTGCTAATAC AGTTATAAGT GCTCCCGGTG CGGATATAAA CATAACAGGA 
GATAATAATA TAGCTTATTT CCTTGTAAAC GGCGGAACTG TGACTAACAG TGCAGATATA 
AACGGAAGTT CCGGAAAATC GAATATCGGA ATATATGCCA AAAATGGTAT TATAAATAAC 
AGCGGAATAA TAAATACAGG AGATTCAGTA CTTAGATATA ATTCAGACGG TACAATAGAT 
TATGATAACA GCGGATATGC AGTGGGAATA TACGGAGACG GTTCTCAGAT AAATAATACA 
GGAACTATAA ACATAAAAGA AAACGGGATA GGAATATATA CAAGAGATAA TACTATACCT 
GTAGTGAATC AGGGAAATAT AAACGGAACT GGCAAGGGTG CAACCGGATT GTTTGTAGAT 
AACGGGGTAA TAGAGAATGC ATTAGGAATT ACAATAACTA TATCAGGTGA TGATTCAATA 
GGAATGGCTG CCAATAAAAA TGGAACAATA ATAAATAACG GAAATATAAT AATGTCTGGA 
AATAATGTAA CCGGTATGTT TGCCAATATA AGCTCGAAAG CGGTAAATAA CGGGCTGATT 
GATATGAGCG GGACAACTGG CAATAAAAGC ACTGCATTTT TATTAGGGGC AGGTTCGACT 
TATGAGAATA ACGGGACATT GATTCTAGGA TCAAATGCAA CAATATCGAG TGTTATAGGG 
ATAAGCCACG AAATACCCAG TTTAATAAAC GGCGGAATTA TTCAGTCAGA CGGTGTATTG 
GCAGCAGACG GGATATCTTT ATCAATAAAA GTAAATCCTG AAAGTGTGGT TTATCAGACT 
TCTGTATCTT CAGGCCCTCA GTTTGTGGCA AACGGAGCTT CAATAGTAGC AGACACGCTG 
ATAACAGATA AGCCGATAAT AATACTTCCG GGATTTGCAG ACGGGACAAA TGCAAATGTA 
TATAAGATAG AAAATGCAGT TATAGCATCC GGAGGAAATT ATGAATTTAT AAGCGGCTCG 
TTATTATGGG AAGCAACACC AGAAGCAACA GGAACCGGAG CAAATGTATA TATGGCAAGA 
AAAGCATTTA CGGATTTTAC AGACGGATTA TGGTTTGAAG ATTTTGGAAC TGCCCTTGAA 
GAAAATTTTC TGGGAGCTTC CGGAGATGCA ATGCAGATTT ATAATAAAAC AGCATACATA 
AAGACTGAGG AAGAATTCCG ACAGATAATG TCGAGTCTGG CAGGAGAGGT ATACGCTAAT 
ATAAATCAGA GAGAATATGA TATAGCAAAG GCATTTGAAG ACTCGCTGCA TTTACTTCAG 
GATTCCTCAA ATAATACAAA AGAAAATGTA AAAATAAGTG TAATAGCAGG AAAAGGTAAA 
AATAAAGAGG AAACAGACGG AGTAACAGGT TATGATTATA CAACTACGGG AGTACTGGCT 
TTACGTGAAG TAGAAAGAAC CTATAGACAT ACATTCGGAT ATTCACTTGG ATATTTACAC 
ACAGGCTTTG AATTCAAGGA CGGAAATGAG AGTGAAGAAT GGGTCGATAC AATCCAGCTC 
GGGGTACATA ATAAATATGC AGCAAATGGA TGGCAGCTGA GAAATGACCT TACGGGAAGG 
GCAAGTATTC ATAATATAGA CAGAAATATA GACTGGCCGT CGCCGCTAGG CAGATCGGAA 
ATGAACGGAA CATATGAAAC ATACAGTATC ACAAGTGATA ATATACTTGG AAAGGCATTT 
GGTCTAGGCA AGAATGCGAG TATAATGCCG TATGGAGCAT TCAGGGCAAT GTATGTGACA 
AGACCTGCAT TTAATGAAAA CGGACTGGAA GCTCTTGAGG TAGAAGGCAA TGATGCATGG 
AGTGCGAAAC CAAGAGCTGG AGTAGAATTG AAAGGAATGA TGCCTTTAGG AAACAGAACA 
GCGTGGCAGC TAAAAGGAAC CCTTGATTTT GCTTATGAAT ATGAGCTTTC AGATCTGAAT 
GAAAGGGAAA AAGCAAGACT GACAGCTATA GAGGACGGAT ATCATAAGCT TGCAAAACCG 
CAGGACGAAA AGGGAACATT CAGAACAAAA GCGGCAATAG GAGTAGAGGC GGAAGACAGA 
TACGGAATAT TCCTGACAGG AGAATACTCA ACAGGAAATG ATAAGGAAAA TGATTACAGA 
GCAGGAGTAA TATTAAAGGC AGTATTTTGA 

 

Protein sequence

MKKNKKLLVS FLALNAMASS YAPASGISSA KYDRMYNSIV KNMETSKSNE KTYQTIEKIL 
KQKNKELKDL YLQNDYIVKP EYLEWQVFFA GFYDEYNEGR DNSSENALYH SKVTGYYDTT 
GSHIVTSGFK DGTAGKPYKE LQQPKEINLG VNIPINVTNR NFSDFNVKPN SGPTVSGSFN 
TVIIPSPSLT PLVSMSKFQP AELDVNITPP FSVPQLSFQV TGFIQGTSSA FRTTTTSDVM 
IDNYKEVIAD SLTTLITGPG GSFSGNIRYG NGALTTWNST VARTGVPPAL YSSVINQSVT 
IKGDWQIDHT IAGQTRFVSY NPYAISTTQY LDFSGNLELN NTGGGYLIGL EHQILAGFSS 
PIPSTTYSML INSGNIYLNN GTQMIGITLE KEFAYGDFGT PSQTYNLGKI ILGSNSSNSI 
GIDFGAYNDG PLNSDMYTGD IEINGTENYG VRVYDIFSSS QNYFDNVRIH GEKSDSGKYG 
AGGDGLINIK GNKNIGLSLS KKIGAVGYVD NISNLNLRVD GEQNVGILRN SSFAVLQTND 
IELTGIQIKS LTYGDDSIDS ILVRSDRYTT IIDASVGARI GSYDTGVTTL GGVITNGIDN 
ILFMANGTGQ SASQVGKIVN NADITITNTA KNAKGLVAYN GGWVTNSGVI INNSERVKPI 
GSNDAGAVGM SVLGSASQGT NSSAGKLLLQ NTSTNLSAGV YNEGTFVNAG EIEVYGDKGI 
GVYSKGAATN TTLSNKLTVS GDNSIALFSD GVVSSNFKIG GLVLNVSGTD AYAFYSKNGG 
GYSITGNTAV NVGAGSIGFQ YVGSGLNAPI NPADITNMFN SAGGTLTFNL NPNSYAMVIQ 
NAKINISDLG TFTSIMSAHV VMSGSDKAKV YKGHLEIDED SSIDSGAVTN VKYRDLLVAS 
SRITLGSGKT LSGTEAGLIG IGQENDSIAG ITNTDMSMTN NGTIVLNGVN STGMYASYGS 
LNNAAAGIIK VSDNGVGLYG TNGTITENYG KIEFGDNGIG VYGTNITPGS TPTYGTKNIS 
VTNFDSIKST GINKAYGIVA DNDNSGSSHI TLNSGSIIDL SSVTNALAGD LVGVYAKNTI 
LNSAGDITVG KNGIAVYAED SNVTLTGGTI NITGDNALGF YLKGSTDFSA AAGTTVNVSG 
QGVTIFNLNT NPGMIFNNLM TINTSGSGTY TLGSIANGTY YYNDSVALSG NGAMISAKNS 
MVLFDGGANV STTGNNNIGI YVDGIYTLPV LPGFTAGIEA ENRGTITLNN SSAGLYAIGG 
TSAYNNGGVI SVGNDSTAIY ATGSTSNALN SGTLIIGSDS QGIYLKDGQT ADNSGMILSR 
GNRAVGIYTD NVVNPIVNNN LIDLSGNKSI GIYAVGPAKT LINNGTVKIG DSSDVNDPGI 
GIYTAAPGDI ITNNGIIDTG NKSIGIYAEG AAVNQSGTFV IGETGTGIYT KGGIVTLGAG 
STISVGQNEA IGVYGTNGTA IHNNSANLSV GNGGYGFVLE TNSTLNNNNI INLNGKGTGV 
YSDGANTVIS APGADINITG DNNIAYFLVN GGTVTNSADI NGSSGKSNIG IYAKNGIINN 
SGIINTGDSV LRYNSDGTID YDNSGYAVGI YGDGSQINNT GTINIKENGI GIYTRDNTIP 
VVNQGNINGT GKGATGLFVD NGVIENALGI TITISGDDSI GMAANKNGTI INNGNIIMSG 
NNVTGMFANI SSKAVNNGLI DMSGTTGNKS TAFLLGAGST YENNGTLILG SNATISSVIG 
ISHEIPSLIN GGIIQSDGVL AADGISLSIK VNPESVVYQT SVSSGPQFVA NGASIVADTL 
ITDKPIIILP GFADGTNANV YKIENAVIAS GGNYEFISGS LLWEATPEAT GTGANVYMAR 
KAFTDFTDGL WFEDFGTALE ENFLGASGDA MQIYNKTAYI KTEEEFRQIM SSLAGEVYAN 
INQREYDIAK AFEDSLHLLQ DSSNNTKENV KISVIAGKGK NKEETDGVTG YDYTTTGVLA 
LREVERTYRH TFGYSLGYLH TGFEFKDGNE SEEWVDTIQL GVHNKYAANG WQLRNDLTGR 
ASIHNIDRNI DWPSPLGRSE MNGTYETYSI TSDNILGKAF GLGKNASIMP YGAFRAMYVT 
RPAFNENGLE ALEVEGNDAW SAKPRAGVEL KGMMPLGNRT AWQLKGTLDF AYEYELSDLN 
EREKARLTAI EDGYHKLAKP QDEKGTFRTK AAIGVEAEDR YGIFLTGEYS TGNDKENDYR 
AGVILKAVF