Gene Sterm_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_2079 
Symbol 
ID8597544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2205884 
End bp2206762 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content35% 
IMG OID 
Product5-carboxymethyl-2-hydroxymuconate Delta- isomerase 
Protein accessionYP_003308864 
Protein GI269120687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA TTACATTTTT AGAAAATGCA GAAGAAAAAA TAGGAATAAT TTCAAAAGAC 
AACAAAAAAG TGATAGATAT AAATAAGACT CTGGGGAGTG ATTTCTATGA TATGACGGAA
TTTATCTGGA GCAATGAAGA GTACATAGAA AAACTAGTAG ATATATATGA AAAGAATGAA
AAAAGTCATT ATAATCTGGA AGATGTAATG ATAATTTCTC CGGTTCCGAG ACCGGCAACA
GATATTCTAT GTGTAGGACT TAATTATTCT GATCATATAA AAGAATCGCA GAGTGTCCAG
GATCCTGATA AAAAAATAGA AGTACCGGTA TTTTTTACTA AAAGAGTGCT GAAGGCTATC
GGTGACGGGG AAATAATATT AAGACATGAA GGAATTACAG AAGAGATAGA CTATGAGGCT
GAGCTGGGTG TAGTTATGGG AAAAGAAGGA ATAAATATAC CGGAAGAAGA TGCAGATGAA
TATATTTTCG GCTATACTAT AGTGAATGAT ATTTCAGCAA GAGATTTGCA GAGAAAGCAT
AATCAGTGGT TTAAGGGGAA GGGTCTTGAC AGCCATACAT CTATAGGACC CTGCATTGTC
TATAAAAAGT ATATTGAAAA CCCTGAAAAC CTAAATATTT CATCAAGAGT AAACGGGGAA
ACAAGACAAA ATTCAAATAC CAAAAATCTT ATATTTTCTG CGCCGTATCT CATAGAAGAG
CTTTCCAAGG GAATGACAAT TATACCCGGC GATATAATAG CAACAGGTAC TCCTGCCGGC
GTAGGCATGG GATTCAAGCC TCCGAAATAC CTGAAAAGCG GTGATGTGGT AGAATGTGAG
ATAGAAAAAA TAGGAATTTT AAAAAATATA GTGGAATAA
 
Protein sequence
MKFITFLENA EEKIGIISKD NKKVIDINKT LGSDFYDMTE FIWSNEEYIE KLVDIYEKNE 
KSHYNLEDVM IISPVPRPAT DILCVGLNYS DHIKESQSVQ DPDKKIEVPV FFTKRVLKAI
GDGEIILRHE GITEEIDYEA ELGVVMGKEG INIPEEDADE YIFGYTIVND ISARDLQRKH
NQWFKGKGLD SHTSIGPCIV YKKYIENPEN LNISSRVNGE TRQNSNTKNL IFSAPYLIEE
LSKGMTIIPG DIIATGTPAG VGMGFKPPKY LKSGDVVECE IEKIGILKNI VE