Gene Sterm_2011 details

Gene Information

• Locus tag: Sterm_2011
• ID: 8597477
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 2140984
• End bp: 2143014
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 37%
• Product: penicillin-binding protein, 1A family
• Protein accession: YP_003308797
• Protein GI: 269120620

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCAA AATTATCTAT AGCAATAAAA ATTTTTATTT TTCTATTTAT AGCATTGCTT 
ATTGCCGTGG GGGTTCTTGT ATATCAGGTA AAGAAAGAGC TTCCCAATTC AGAAGTAATT 
GAAAATTACC AGCCTATTTC CCCTACTGTT ATTTATGACA TTAATGGAAA CCAGTTGGAC 
ATCATCACTT TGGAAAACAG GGCTCCGGTT CATATAAGCG AAGTTCCCAT GGATGTTCAG 
AACGCTTTTC TTGCTATAGA GGACAGAAAA TTCAGAACAC ACCATGGTTT TGACTTTATG 
AGACTCGGTA AAGCAGTATT ATCTAATGTT ACCGGCAGCG CCAAAGAAGG CGGAAGTTCC 
ATTACCCAGC AGCTTGCGAA AAATGCATTT CTGTCTCCTG AAAGATCATT TGACAGAAAG 
CTGAAAGAAG CTCTGCTTGC TATTGAGATA GAGAGAAGAT ATACTAAAGA CGAAATTCTT 
GAAAATTATC TAAATACCAT CTATTTTGGT AACGGATCAT ACGGAATCAA AAATGCAGCA 
AGAAAATATT TTGATAAGGA ACCAAAGGAT CTTACAATTG CTGAAGCTGC GATACTTGCA 
AGTATTCCAA AATCTCCTAC AAAATATTCG CCTACAAAAA ATATGAAAAA TGCAATAGAA 
CGTCAGCAGG TAGTTTTGGC ACAGATGTAC AAATATAAGT TTATTACCGA AGCACAATAT 
GAAGAAGCAT TGAACCAAAA AATTGTACTT TCTAAAAACA GCGACTTAAA TGCTGATCTG 
AATGAAGACG AACAAATTTC GGTTTCAAAT AATGCGCCGG AATTTACATC TATTGCTATA 
AGCGAAGCAA AAAGAATACT AAAAATCAAT GAGAGCGATC AAAAAGCTCT GTTTGATGGA 
TATAAAATAT ATACTACAGT TGACCTTGAT ATGCAGAGAG CTGCTTACAA AGCTTTTCAC 
AATAATTACA ACCTGAAAAG ACGTGAAAAA CTAAACGGAG CATTAATCTC AATGGATCCT 
AATACAGGAT TTGTAAAAGC TATGGTCGGC GGGAAAAATT ACAGAAAAGG TGATTTTAAC 
AGGGCAATAA GCTCTACAAG ACAGCCCGGT TCATCATATA AGCCGTTTAT TTATCTGGCT 
GCAATACAGC AGAATATTCC TATGAATACT GTTATAGAGG ATTCTCCTTT TACCACTCCT 
GGATGGAGCC CGAATAACTA TGACAGAAAA TTCAGAGGCG GCATGAGTCT GCTAAAAGCC 
ATTGAAATCT CAAATAACGT AGTACCTGTA AAATTATTAC AGCAGATTGG TATAGATAAA 
GTGGAAAAAA TCTGGCGTGA TGCCGGTATA GAAGGCGGAG ACTTCCCTCG GGATCTTACC 
CTTGCCTTAG GATCTATTAC CACTAACCCC CTTAATATGG CAAAGGCTTA TTCAGCTATT 
GCTAACGGCG GTTACAGAGT TAAACCTATA TTTATATATA AAATAGAAAA TAAATATGGT 
GAAGTTATTT ATGATGCTAA AAAAGAACAG GAAAAAGTAA AAATATATGA ACCTGAAGAT 
GTGGCACTGA TTACTTTCAT GCTTGAAAGT GCGGTAAAAT ATGGTACAGG TCAAAGTGCA 
AAAGTATTTA AAAACGGACA GCTTATACCG GAAGCCGGAA AGACTGGAAC TACAAGTGAC 
TATGGTTCTG CATGGTTCAC AGGATACACA CCTACACTGG TAACCATAGT ATATGTCGGT 
AACGATGATA ATAAATCTAT GGGCGGCGGA ATGACTGGAG GAGCTGCTGC TGCTCCTATC 
TGGAAAAACT ATATGCAGAC TGTTGTTAAT CTTGAAGGAT TTGAAGTAGG TAATTTTGCC 
TTTATTGATG ACTACATAAA AAGTAAGGAT CTTTCTATGA GAGATATTGA TTTGAAAACC 
GGTCTTCTTG ATACTGATAA TATGGATAAA AGAACAGCAT TATTCAAAGT CGGTACAGAG 
CCTGTGGAAC TTCAGAATAA GTACAGAATG GGACTCGAAG GTTTCTTTTA A 

 

Protein sequence

MKSKLSIAIK IFIFLFIALL IAVGVLVYQV KKELPNSEVI ENYQPISPTV IYDINGNQLD 
IITLENRAPV HISEVPMDVQ NAFLAIEDRK FRTHHGFDFM RLGKAVLSNV TGSAKEGGSS 
ITQQLAKNAF LSPERSFDRK LKEALLAIEI ERRYTKDEIL ENYLNTIYFG NGSYGIKNAA 
RKYFDKEPKD LTIAEAAILA SIPKSPTKYS PTKNMKNAIE RQQVVLAQMY KYKFITEAQY 
EEALNQKIVL SKNSDLNADL NEDEQISVSN NAPEFTSIAI SEAKRILKIN ESDQKALFDG 
YKIYTTVDLD MQRAAYKAFH NNYNLKRREK LNGALISMDP NTGFVKAMVG GKNYRKGDFN 
RAISSTRQPG SSYKPFIYLA AIQQNIPMNT VIEDSPFTTP GWSPNNYDRK FRGGMSLLKA 
IEISNNVVPV KLLQQIGIDK VEKIWRDAGI EGGDFPRDLT LALGSITTNP LNMAKAYSAI 
ANGGYRVKPI FIYKIENKYG EVIYDAKKEQ EKVKIYEPED VALITFMLES AVKYGTGQSA 
KVFKNGQLIP EAGKTGTTSD YGSAWFTGYT PTLVTIVYVG NDDNKSMGGG MTGGAAAAPI 
WKNYMQTVVN LEGFEVGNFA FIDDYIKSKD LSMRDIDLKT GLLDTDNMDK RTALFKVGTE 
PVELQNKYRM GLEGFF