Gene Sterm_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_2001 
Symbol 
ID8597467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2130813 
End bp2131625 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content31% 
IMG OID 
ProductRNA polymerase, sigma 32 subunit, RpoH 
Protein accessionYP_003308787 
Protein GI269120610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.605415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG AATATAATTT AATTGATTTA TATTTGAAGG ATATTCAAAA ATATGAATTA 
TTAAATAGAG AAGAAGAATA TGAACTCTTT AGAAGAATCA AGGAGGACGA TTCTCAGGAT
GCAAGACACG AGCTTATTTT ATCTAATTTA AGACTTGTAA TAAGTATTGC AAAAAAATCT
CTGGGGAACG GACTTCCGCT TATTGATCTG ATAAGTGAAG GCAATATTGG TTTAATCAAG
GCAATCAATA AATTCGACTA TACTAAAGGA CACAGATTTA GTACATATGC AGTGTGGTGG
ATAAAGCAGT CTATAAAAAA GGCTATTATT AATAAAGGAA GGGATATAAG AATACCTTCA
TATAAATATG AACAGCTTGC AAAAGTAAAT AAAGTGATGG TTAACTATAT AAATGATCAT
GGCGAGACAC CAAGCGTAGC TTATATAGCG GAACAGCTGG AAATAAAGGA ATATAAGGTA
AGTCTCCTTA TAAACGAATT TCAGGATATA ATATCACTGA ATGACGTCAT AGGGGATAAC
ATCTTTCTGG AAGATGTTAT AGGGAATGAA GATAATATAG AAGAAAAAAT AATAAAGAAT
GACCAGATAA ACAAAATGCG TGAACTTCTT GATAATATAT TAAGTGAAAG AGAAAGAGAG
ATAATAGAAC TCAGATATGG ATTATACAAC AATAAAATGC ATACCCTGAA AGAAATAGGC
GATGAGCTGA ATATAACAAG AGAGAGGGTA AGGCAGATAG AGAAAAAAGC AATTACAAAA
CTAAAATCTC ATTTCCATGA GTTTTTTAAA TAA
 
Protein sequence
MEKEYNLIDL YLKDIQKYEL LNREEEYELF RRIKEDDSQD ARHELILSNL RLVISIAKKS 
LGNGLPLIDL ISEGNIGLIK AINKFDYTKG HRFSTYAVWW IKQSIKKAII NKGRDIRIPS
YKYEQLAKVN KVMVNYINDH GETPSVAYIA EQLEIKEYKV SLLINEFQDI ISLNDVIGDN
IFLEDVIGNE DNIEEKIIKN DQINKMRELL DNILSERERE IIELRYGLYN NKMHTLKEIG
DELNITRERV RQIEKKAITK LKSHFHEFFK