Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2001 |
Symbol | |
ID | 8597467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 2130813 |
End bp | 2131625 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | |
Product | RNA polymerase, sigma 32 subunit, RpoH |
Protein accession | YP_003308787 |
Protein GI | 269120610 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.605415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG AATATAATTT AATTGATTTA TATTTGAAGG ATATTCAAAA ATATGAATTA TTAAATAGAG AAGAAGAATA TGAACTCTTT AGAAGAATCA AGGAGGACGA TTCTCAGGAT GCAAGACACG AGCTTATTTT ATCTAATTTA AGACTTGTAA TAAGTATTGC AAAAAAATCT CTGGGGAACG GACTTCCGCT TATTGATCTG ATAAGTGAAG GCAATATTGG TTTAATCAAG GCAATCAATA AATTCGACTA TACTAAAGGA CACAGATTTA GTACATATGC AGTGTGGTGG ATAAAGCAGT CTATAAAAAA GGCTATTATT AATAAAGGAA GGGATATAAG AATACCTTCA TATAAATATG AACAGCTTGC AAAAGTAAAT AAAGTGATGG TTAACTATAT AAATGATCAT GGCGAGACAC CAAGCGTAGC TTATATAGCG GAACAGCTGG AAATAAAGGA ATATAAGGTA AGTCTCCTTA TAAACGAATT TCAGGATATA ATATCACTGA ATGACGTCAT AGGGGATAAC ATCTTTCTGG AAGATGTTAT AGGGAATGAA GATAATATAG AAGAAAAAAT AATAAAGAAT GACCAGATAA ACAAAATGCG TGAACTTCTT GATAATATAT TAAGTGAAAG AGAAAGAGAG ATAATAGAAC TCAGATATGG ATTATACAAC AATAAAATGC ATACCCTGAA AGAAATAGGC GATGAGCTGA ATATAACAAG AGAGAGGGTA AGGCAGATAG AGAAAAAAGC AATTACAAAA CTAAAATCTC ATTTCCATGA GTTTTTTAAA TAA
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Protein sequence | MEKEYNLIDL YLKDIQKYEL LNREEEYELF RRIKEDDSQD ARHELILSNL RLVISIAKKS LGNGLPLIDL ISEGNIGLIK AINKFDYTKG HRFSTYAVWW IKQSIKKAII NKGRDIRIPS YKYEQLAKVN KVMVNYINDH GETPSVAYIA EQLEIKEYKV SLLINEFQDI ISLNDVIGDN IFLEDVIGNE DNIEEKIIKN DQINKMRELL DNILSERERE IIELRYGLYN NKMHTLKEIG DELNITRERV RQIEKKAITK LKSHFHEFFK
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