Gene Sterm_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1990 
Symbol 
ID8597456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2121312 
End bp2122271 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content37% 
IMG OID 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_003308776 
Protein GI269120599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.356638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA ATGAAGACAG GCTTTTAGTA AAAATAGCAC AAATGTACTA CGAAGAAAAT 
AAAACACAAA GCGAAATTTC AAAAATACTC GGAATCCACA GAACAAGCAT AAGCCGGATG
CTTAAAACAA TAAGAGAAAA GAAAATAGTA AAGATTTTTA TTAATTATGA TTTCGGGGGA
ACATTAAGCC TGGAAGAGGA GCTTAAGAGC GTATTCGGAT TAAGAGATGC CATAATAGTA
CCGTCTACTC CGAATCAGGA TAAGAAGATA AAGGTAAGTC TTATAGGTGC AGCAGCAGCG
GATTATCTCG GAAGGATAGT AAAAGACAAT GATCTTATAG GTGTTTCCTG GGGCGAGGCC
TTGGCAGAAA CTGTGAATGC CATGGAAAAA AAGGATTGTA AGGGAGTGGT ATGTATTCCG
TTAATAGGAG GACCTTCGGG AAAGCTTGCC AGCTCATTTC ATGTGAATAC CATAGCTTAT
GAAATAGCCT CTAAGCTGAA TGGAAAGTCT ATGCTTATAG ATTCACCGGC TATTCTTGAG
AGTGAGGAAA TAAAAAAAGC ACTTATGGAA ACTGAATATA ACCATGAGCT GTCTGAATTA
TGGAAGAAAA TAAATATTGC AGTATGCGGA ATAGGGAGCC CTCTGATCAG CAAGCATTCA
AACTGGCAGG GCTTTTATGC GGATAATCTT CTGGAATCAT TAAAAGGCGA ACAGGTAGCG
GGAGATATAT TATCGAGATT TTATGATATA AACGGAAAAG TTTTGGATAC CATTATTTCC
AAAAAAATGA TAAGCTCTGA ACTTGATAAT TTGAAAAACG CTGATTATTC CATAGGAATA
GCAGAATCTC TGGATAAAGT AGCCGGAATT CTGGGAGCTT TGAGGGGGAA ATATATAAAT
GTACTGGTAA CAACTGAGGA AACAGCAGAA GCAGTTTTAA AGATGAATAA TAAAGCATAA
 
Protein sequence
MKKNEDRLLV KIAQMYYEEN KTQSEISKIL GIHRTSISRM LKTIREKKIV KIFINYDFGG 
TLSLEEELKS VFGLRDAIIV PSTPNQDKKI KVSLIGAAAA DYLGRIVKDN DLIGVSWGEA
LAETVNAMEK KDCKGVVCIP LIGGPSGKLA SSFHVNTIAY EIASKLNGKS MLIDSPAILE
SEEIKKALME TEYNHELSEL WKKINIAVCG IGSPLISKHS NWQGFYADNL LESLKGEQVA
GDILSRFYDI NGKVLDTIIS KKMISSELDN LKNADYSIGI AESLDKVAGI LGALRGKYIN
VLVTTEETAE AVLKMNNKA