Gene Sterm_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1962 
Symbol 
ID8597428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp2093554 
End bp2094300 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content32% 
IMG OID 
Producttranscriptional regulator, RpiR family 
Protein accessionYP_003308748 
Protein GI269120571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.841388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATTC AACTGAATGA CAAAATTAAA TCGAAGCTTA CCAGCTCCGA AGAGCAGGTA 
ATAAAGTATA TTAATGAAAA TGATAATAAA CTGGTTGATA TGTCAATAGT AGATATAGCC 
GAGGAAACAT TTACCTCTCC CGCCACAGTT TCAAGGGCAA TAAAAAAATG CGGGGTTAAC 
GGCTTTATGG AACTTAGATA TAATTTATCC AAAAGGAAGG AAGAAATAAA CAGTTCCAAG 
GATATAAATG AAATTTTCAG CAAATCACTT ATAGAAACAA GACAGACACT GGAAAACATT 
TCTGTTAACC AGATATTGGA AATAATTGAA CTGATACAAA AAAGCAAAAA AATAATAGTA 
ATAGCAAGAG GACTCAGTGA ACTCGTAGCT ACAGAATTTT CTTTAAAGCT GGAATTAATG 
GATTTTAACG TATTTAATAT ATCAGATCCT AATATCATGA AAAAATTCAG CAGGGAAGCA 
AATAAAGATC ATCTTTATAT AGCATTTACA CTAAAAGGAG AAGATCAGGA TATTCTTACC 
ACGATAAAAA ATGCCCATTT AAGAGATGCA AATGTAGTAG CATGCTCCTG CGGCAGCAAT 
AAAGAATTGA GAAAATATTC AGATCATATA ATACTGGGCT ATAAACACTC TAATATCTCG 
ATAAAAAAGT TTGAGGTGAC CTCAAGACTT CCTTTATTTG TGATTTCAAG AGTTATTCTT 
GATTATCTGG TAATGAATTC AATGTAA
 
Protein sequence
MIIQLNDKIK SKLTSSEEQV IKYINENDNK LVDMSIVDIA EETFTSPATV SRAIKKCGVN 
GFMELRYNLS KRKEEINSSK DINEIFSKSL IETRQTLENI SVNQILEIIE LIQKSKKIIV 
IARGLSELVA TEFSLKLELM DFNVFNISDP NIMKKFSREA NKDHLYIAFT LKGEDQDILT 
TIKNAHLRDA NVVACSCGSN KELRKYSDHI ILGYKHSNIS IKKFEVTSRL PLFVISRVIL 
DYLVMNSM