Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1941 |
Symbol | |
ID | 8597408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 2062526 |
End bp | 2069317 |
Gene Length | 6792 bp |
Protein Length | 2263 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003308728 |
Protein GI | 269120551 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT ATAGAAGTGC ATTAATATGC TTACTGGCAT TTAATGCTGC GACTTTTACT TATAGTGCGT CAAATGTCAA TAGAAATACA TCTGAAAATT TGTATAATCA AATGACGAGA AATATAGAAA CAGGGAAAAG CAATGACTCA AACTATAAGC AAATAGAAAA AATATTGAAT AAAAAAAATA AAGAAATAAA AGATCTGTAT TTACAGGGAG ATTATATAGT AAAACCGGAA TATCTGGAAT GGCAGATATT TTTTAGCGGT TTCTATGCGG AAAGAAGAAA GGGAGATAAT ACATTAAATA ATGCGGATTA TTATTCAGAT CCTGATGAAA CTCCTACAAA GCCGATAAAC CCGCAGCCGC CTATAGATGT TAACATAGGA CTGGCAGTCT CTGTAAAGGC AATAGCCCCA AGAGACAGAA GGCTTGCTAT AACACTGCCG AATGAAATTA ATATAAATCC GACAGTTATT AATATACCAG TTCCGACAGC ATCTGCAGTC ATTGCAGTAA ATCCGCTGCA GTTTCAGCCG ATTTATCCGA GTATACCAGT GGTTAGTGTG AGTACAGTAA CACCGATCTC GTTTAATTTT CCCGGTTCTG CCAATAGTGA CGATCAGTAT TTCTTAAAGC AGAGTGCTGC TATTGCCCCT ATTTCCCAGC AAAATTTAAC AGGACAAGGA ACCGGAGGGA CTATGGATGT CATAAGCCGT TCATCAGTTT TGAATCAGGA TTTTGACATT TATGTTCAGG ATACTCATGC AGTAGGTGTA TCTGGCGGAG CAGCACACAG ATTGACAGAT AACGGAATAC AGAATACATC TGCTACAGGT TTGACTTCAT CGCATGCTGC TATGAAACTG ATAGGGGGGC ATACTGTAAC CATAGATAAT ATGGATTTTC GTATGGTAGG TGTGGGGAAT AAGCCGGGAG ACTATCTGAT GCTATTTCAT ACAGATGCTC ATGATGACGG TGGTGAAGCT GCAAAATGGA TAATTAATCC TAATACAACA ACAAAATTAT ACGGACAGCA GCTGATATTT TATGGAGTTC AGTCACATAA GACATATACT TATGGTGCAG ATATGATAAA TTACGGAAAT ATAGAAGCCT CGGCAGATAC CTCGGTGATT ACGGGAGGCG GAATCGAAAG CGGTTTAACC CCGCAGCAGA GAATAATATT TACTACAATA GATGCTAATG TAGGAAATAT AGTTTATTAT AATAGATATT TTAATTTTAT TAATGAAAAT GGAGCCAATA TAACATTAAA CGGAACTTCT GATGTGTTAG CCAATTATGC AACACCCGGA AATACAAACG GAGGAGCAAT TTTTACCAAT AACGGAAATG TGACTTTAAA CGGATTGAAT TCAATAGGAA TAATACTGAA TAGTTCGGTA AGTGATTTTG GTGATTCCAG AATAGTACTG AATAATCCTT TGGTATTAAA CGGTGATAAA TCAATAGGTA TACAGGCTAC GAATTCAATG ATAAATCTGG ATAATTCTGT AATAAAGGTA AACATCGGAA CAGCAGGAAA TGCAGCTAAT TCCACTGGAA ATGAGGCTGG TGGGGACGCT TCAAAAGTAG AAAATGCAAT AGGAATGGCT GTGGATTACA GCACAGCAAA TCCGCTCAGA ATGAGTAATT ATAATATATC TTTAGGAAAT GCAGCTAAAA ACAGCTCGGG AATTATAGTA CAAAACGGAA ATATAACTTT GGGATATGAC TCCGCGGCAG GGAAAACACA ATTGATAAGC AGTAACGGAG GTGTACAGAA TAATCTGCTT GTTGCCATAG GCTCGAATTC TTCGGCGACT ACAGAAGCAA ATACAACATT AAGCTTATTA AACGGTAATG GACAGGTCGG TATTTTTTCA AGTAACGGAG CGGCAATTAC TAACGGAGGT ACTCTGAATG CCAGTGGTAA CGGGACAATA GGAGTAATCA CAAATGACGG AACTGTTAAT AATACAGGAA ATCTGAATAT AAGCGGAGGA GTATACACTG ATCCTTCAAA CAATAAAATG GGAACTGTGG GAATAGCAGT TTTAGACAGC GGAGCAGGAA CTGCAAGCTT TACATCTTCT TCGGGAAATA TTCAAATAAA TGTAAACGGA CAGGAATCTA CAGGTTTATT CACAGATTCA GGTTTAGTAG ATATAACAGG CGGAAATATT CAGGCATCGG ACAGTGCTTT TAACCTTTAC TCAAAAGGTG CCACAGGAGT AATAAGATTA AGCGGAACTA CTCTGCGTAC TGGTCAGAGA TCATTGCTGT TCTTTAGTGA AGACGGTGGT ACTTTTGACT TGACAAATGT AAATGCAACA ATAGCAGGAG GGGCTGACAG CTCTTCAAGA GGAACTGCTT TTTACTACTC AGGAAACAAT ACACCATTGA CTAAGACAGA CCTTGAGAAT TATTTTCAGA CAACTTTCGG AGGTCTTACA GGTAAGCTGA CTTTAAATAT GGAGTCAGGC TCAAGATTAT TTATAGTAGA CAATATAATA ATGAATCTGA GTACAGCAGC AACTCCTTTG GGGTCACTTG CCAACGGACC GACAGTCATA GGAAGCAATT ATAAAACATA TATGATGTAT AAGGGAACTT TGATTATAGA TCAGAATGTA AATCTTGACT CAGCTGCAGA CCCTTATAAT ACACTAGAGC TGGCTACATC GCATATAAAT AATACATCAG CAACAGTTAC AGGAACACAG ACAGGACAAA TAGGAATGGC ACAGGAAAAC GGGCTTGATA CTTTGGGAGC TTCATTGCCG AGAAATCAGG TTACATTAAT AAATGATGCC GGAGCTTTTA ACTTGAGCGG TTCTAATTCT GTTGGAATAT ATGCAAGTAA CGGGGAAATA AGCAATATAA ACGGAGGAAA CCTTAATCTT ACAGGTAATG GTTCTATAGG GATGTATGCA GTAAATGGTA CAAAAGCAAT TAATGATAAT ACTTCAAATA TAGTGATCGG AACAAACGGC ATAGGAATAT ATGCCGAAGG ATTCAAACAG GGATCATCAC AGGCCTTCGG AAACGGAACG CTGGATATAA CAAATAACGG AAATATAACT GCACAAAGCG GCTCAGGGGC AATAGGGATA TTTCTTAATA ATAATTCAAC AGGAGTAAGA GGGGATACTA AACTTGATAT AAGCGGAGGA AATATAGATG TTCAGAATTC AGTGAACGGT GTAGGTGTAT ATATAAGCGG CGGTACACTG ACTTCGACTT CTCTGACTAC AATCAGCGTA GGTACAAACG GTATAGGGCT CTATGCAAAA AATTCAGATA TAAACTTATC TGATATAACA TTAAATTTAA ATGGTGATAA TGCTCTGGGA ATATACTTTG ACGGAGTATC AAACTTTACA GGTGCAGGAA CATTTAATAT AGACGGTAAA AATGTAGTGT TGTATAACAT GATTTCCGGC GGGGTAGTAA ATGCAAATAT AAATCTGGGT ACAGTAACAG CAGGGTCTTC ATATATCTTC GGGAGCCTGA TTGATCAGGT GGGAGTTTAT ACAGGAGATG CGAATTTAGC ATCAAACGGA AGCTTTCTGA TCGGAAAAAA TTCGGCAGCA TTTATGACAA ATACGAGCAG TATTACGGTA CAGCCAGGTT CTGTTAATAC AAGCGCCTTT GTATTGGACG GACAATATGC TATGCCTGCG GGGAGCAGTG CATATACAGG AATGACAGCT GATATGGACG GGGAAAATGC AGGTATTATA TCAGTAGATG ATTATTCTGC GGGAATATAT GGAAGAAACG GATCAAGACT GATTAATACA GGAACTATAT CAGTAGGAGA TTATTCAGCT GCGGTAGCAT CTTCAGGTGC CGGATCAATA GCAATAAATA ACGGAATAAT AAATCTAGGT TTAAGATCAA ATGCGCTATT TTTAAAAGAT GGTGTGAATA TAGAAAACAG AGCCTCAGGC GTTATTACAG GAAGTTCGGA TCATACAATA GCATTGTTTG CCGATAATGT AAGCGGTCCT ATAATAAATC AGGGATTGAT AACACTTACG GGAGATCAGT CAGCAGGTAT TTATTCAGTA GGTTCTGCGG TAAAAGTAAT AAATAACAGC GGAACAATTA CAGTTGGAGA TTCACTGGAT GCACAGAATC CAAGTATAGG AATATATACT GTTAATCCGG GAGATCAGAT TACGAATAAT AATCTTACTG CGGGTAATAA TTCAATGGGA ATCTACAGTG TAGGCGGACA GATAACACAA ACAGGCATAT TAAATATAGG AAATACCGGA GCGGGTGTAT ACGTAAGAGA CGGTTCGGTT AATATAACAG GTACTGCAGT ATTAAACTTA GGAACAGATA AAGCAGTAGG GGTATATGCC GAGAATTCGG CAGTAACAAA TGCTGCTGAT ATGAACATAG GAAATGAAAA CTTTGGTTTT GTGGTTTTAG ACGGTTCATT TTCAAATACA GCATCAAATA TAACAATGGG AACAGATTCT ATCTATTTGG TTAAAAGCGG AGCAGGTACA GTAACAAATG CTTCTGGAAC AACAGTGTCA ATGACAGGTT CTGAAAATTC GGCATTCTAT CTGCTAAACG GGGTAAATTT CGTAAATGAC GGAACTATTA CAGGAACAGC CGGAACAAGT AATGTGGGAG TACACAGCAG ATCAGGAACT GTAACAAATA ACGGAGCTAT AAATCTCGGA GCTTCAAACC TTGTATTCAA AACAAATTTT GACGGAAGTT ACACACTTGA TCCAAATGGA AATAAAATCG TAGATATAGA AAAAAGTTTG TTCACTGTGG GAGTGTATGG AACAGACTCA ACTCTTGTTA ATACATCAAC AGGAAATATT ACGGTTGGTG CCGGAGCTGT GGGAATAGCA GCTATTTCCG GTTCTGCAAG AAATGATGGT AATATAACAG CCACAGGTAA TTATTCGATG GGAATGTATA CTGAAAGAGC CAGAATAGTA AATAACGGAA CTATTAATGT AACAGGTGAT AATGTAATAG GGATGGCAGG AAACGGAGAA GGTTCAAAAA TAGAAAACTA CGGAACTATA AGAGTTTCCG GAACTCATGC AATAGGTATG TACGGCCTGT CGTCATCAGA AATAATAAAT GGCGGAACTA TAATAGCCGA CGGTGAAGGA GCTCAGGGAA TAGTTCTGGG GAACGGTTCG ACTCTTAATA ACCTTGTAGG AGGAACAATA ATAATAAACG GCGGAGTAGG TACGGGAAAT TATGGTGTAG GTGCCGGTGA AGTATATAAT ACTCCTACAA TTATAAATGC GGGTATAATA AAAGTAGCTG AAAAATTCAC TACAGATGGA GTAAATGTGG TGATAAACGT AGATCCTTCG ACAATAAAAG CACCGACAGC AGAAGATATA GCAGCAGGAA ATTATGATCC TTCAGACATA GGTGCTGATT ATCTGATATC AAATTCTGTC AGCATACAGG CTCCGGCCTT TGACGTGACT TCGCCGCTTC AGGTTTCAGG GAATTTTGCT GTAGGAACAA ATATGGAAAA ATATAAACTG GAAGATGTGA TAATACCTGA TTCTGGTTTC GCTGCTGACT CGGCTTCGAT ACCGGTACAG AGTAAATCAC TTACATGGAA AGCAATACCG GTGCTAAATT CAAGAGGAAA TCTGGATGTG TGGATGGAGA AAATACCATA TGATAACTTT ACAAACGGTC TGTGGTATCA GGACTTTGGA CGTGCATTAG ATGAGAAGTA CTTTAGAGCC GAAGGAAATG CATTGAAAAT ATACGATAAG CTTGATCTTT TGGAAAATGA GCTGGACTTC AGACATCTGA TGGCAAGTCT TGCAGGCGAT GTGTATGCTA ATATCAACCA GAGAGAGGAA GATATAGCCA GAACCTTTGA AAGCTCACTT GACCTTTTGC AAAACTCAAA AAATAATACA AAAGAAAATG TAAAAATAGA TGTAATTGTA GGAAAAGGTG AAAATAAGGA AAATACCGAC GGTGTACAAA GCTATAATTA TACTACAGCA GGAGTACTTG CACTGCGTGA AGTAGAGAGA ACATACAGAC ATACATTCGG CTACTCTCTG GGCTACCTTC ATACAAGCTT TGAATTCAAC GACGGAAACA ACAGTGAAGA ATGGGTGGAT ACTGTTCAGC TGGGAGTACA TAATAAATAT ACTGCGGACA GCTGGAAAAT AAAAAATGAC CTCACAGGAA GAGTAAGCTT TCATAATGTA GACAGAAACA TAGACTGGGG AGCCGGGAGC AAAAGATCTG AAATGAACGG TACTTATGAA ACTTATTCAA TAACATCTGA CAATATAATC GGAAAAGAGT TTGAAATAGG CAAAAAAACA GTTATAACAC CATACGGAGG ATTAAGAGCC ATGTATATAA CAAGACCTAC ATTTGATGAA AGCGGGCTGG AAGCAGTGGA AGTAAAGGGT AATGATGCCT GGAGCGTAAA ACCCAGAGCA GGAATAGAGC TGAAAGCATC AACACCGCTA AGTCCGAAAA GTGAATGGAA ATTAAAGGGA ACTTTGGATC TGGCATATGA ATATGAGCTT GCTGATCTGA ATGAAAGAGA AAAAGCAAGA CTTACAGCAA TAGAAACAGA CTATCATGAT TTATCAAAAC CTATGGATGA AAAAGGAGCA TTTAGAAGCA AGGCATCTGT GGGTGTGGAA GTGGAGAACA GATACGGTAT TTTCCTTACA GGTGAATATG TGGTAGGAAA TGACAATCAG GATGATTACA GGGCAGGAGT ATCATTAAAA GCTGTATTTT AA
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Protein sequence | MKKYRSALIC LLAFNAATFT YSASNVNRNT SENLYNQMTR NIETGKSNDS NYKQIEKILN KKNKEIKDLY LQGDYIVKPE YLEWQIFFSG FYAERRKGDN TLNNADYYSD PDETPTKPIN PQPPIDVNIG LAVSVKAIAP RDRRLAITLP NEININPTVI NIPVPTASAV IAVNPLQFQP IYPSIPVVSV STVTPISFNF PGSANSDDQY FLKQSAAIAP ISQQNLTGQG TGGTMDVISR SSVLNQDFDI YVQDTHAVGV SGGAAHRLTD NGIQNTSATG LTSSHAAMKL IGGHTVTIDN MDFRMVGVGN KPGDYLMLFH TDAHDDGGEA AKWIINPNTT TKLYGQQLIF YGVQSHKTYT YGADMINYGN IEASADTSVI TGGGIESGLT PQQRIIFTTI DANVGNIVYY NRYFNFINEN GANITLNGTS DVLANYATPG NTNGGAIFTN NGNVTLNGLN SIGIILNSSV SDFGDSRIVL NNPLVLNGDK SIGIQATNSM INLDNSVIKV NIGTAGNAAN STGNEAGGDA SKVENAIGMA VDYSTANPLR MSNYNISLGN AAKNSSGIIV QNGNITLGYD SAAGKTQLIS SNGGVQNNLL VAIGSNSSAT TEANTTLSLL NGNGQVGIFS SNGAAITNGG TLNASGNGTI GVITNDGTVN NTGNLNISGG VYTDPSNNKM GTVGIAVLDS GAGTASFTSS SGNIQINVNG QESTGLFTDS GLVDITGGNI QASDSAFNLY SKGATGVIRL SGTTLRTGQR SLLFFSEDGG TFDLTNVNAT IAGGADSSSR GTAFYYSGNN TPLTKTDLEN YFQTTFGGLT GKLTLNMESG SRLFIVDNII MNLSTAATPL GSLANGPTVI GSNYKTYMMY KGTLIIDQNV NLDSAADPYN TLELATSHIN NTSATVTGTQ TGQIGMAQEN GLDTLGASLP RNQVTLINDA GAFNLSGSNS VGIYASNGEI SNINGGNLNL TGNGSIGMYA VNGTKAINDN TSNIVIGTNG IGIYAEGFKQ GSSQAFGNGT LDITNNGNIT AQSGSGAIGI FLNNNSTGVR GDTKLDISGG NIDVQNSVNG VGVYISGGTL TSTSLTTISV GTNGIGLYAK NSDINLSDIT LNLNGDNALG IYFDGVSNFT GAGTFNIDGK NVVLYNMISG GVVNANINLG TVTAGSSYIF GSLIDQVGVY TGDANLASNG SFLIGKNSAA FMTNTSSITV QPGSVNTSAF VLDGQYAMPA GSSAYTGMTA DMDGENAGII SVDDYSAGIY GRNGSRLINT GTISVGDYSA AVASSGAGSI AINNGIINLG LRSNALFLKD GVNIENRASG VITGSSDHTI ALFADNVSGP IINQGLITLT GDQSAGIYSV GSAVKVINNS GTITVGDSLD AQNPSIGIYT VNPGDQITNN NLTAGNNSMG IYSVGGQITQ TGILNIGNTG AGVYVRDGSV NITGTAVLNL GTDKAVGVYA ENSAVTNAAD MNIGNENFGF VVLDGSFSNT ASNITMGTDS IYLVKSGAGT VTNASGTTVS MTGSENSAFY LLNGVNFVND GTITGTAGTS NVGVHSRSGT VTNNGAINLG ASNLVFKTNF DGSYTLDPNG NKIVDIEKSL FTVGVYGTDS TLVNTSTGNI TVGAGAVGIA AISGSARNDG NITATGNYSM GMYTERARIV NNGTINVTGD NVIGMAGNGE GSKIENYGTI RVSGTHAIGM YGLSSSEIIN GGTIIADGEG AQGIVLGNGS TLNNLVGGTI IINGGVGTGN YGVGAGEVYN TPTIINAGII KVAEKFTTDG VNVVINVDPS TIKAPTAEDI AAGNYDPSDI GADYLISNSV SIQAPAFDVT SPLQVSGNFA VGTNMEKYKL EDVIIPDSGF AADSASIPVQ SKSLTWKAIP VLNSRGNLDV WMEKIPYDNF TNGLWYQDFG RALDEKYFRA EGNALKIYDK LDLLENELDF RHLMASLAGD VYANINQREE DIARTFESSL DLLQNSKNNT KENVKIDVIV GKGENKENTD GVQSYNYTTA GVLALREVER TYRHTFGYSL GYLHTSFEFN DGNNSEEWVD TVQLGVHNKY TADSWKIKND LTGRVSFHNV DRNIDWGAGS KRSEMNGTYE TYSITSDNII GKEFEIGKKT VITPYGGLRA MYITRPTFDE SGLEAVEVKG NDAWSVKPRA GIELKASTPL SPKSEWKLKG TLDLAYEYEL ADLNEREKAR LTAIETDYHD LSKPMDEKGA FRSKASVGVE VENRYGIFLT GEYVVGNDNQ DDYRAGVSLK AVF
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