Gene Sterm_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1940 
Symbol 
ID8597407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2061513 
End bp2062091 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content37% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003308727 
Protein GI269120550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAT TATTACTTTT GGTTATATTA TTCGGATGCA TGAGTGTAAT CAATCTTGCA 
GCCGGCTGTA ATGCCCAGAT ATGTACATGT CCCGGAGGCG GCTATGTAAC ATATGGTCAA
TACTGCCCTG TTAATACTCC CAGCTACTCA GCTCCACCTG ATGCCCCGCC TGTTGATATG
TATTATTTTA TACTTGATAT TAAAAATAAT TCTTATCAGC TTGTTGATTT AAAGACAAAA
AATTTTCTGA CTGCTCTTGA CAGATCCTTA TCCTGTGACA GAAGCACTCA GGTCTGTACG
GTAGTATCTA TCCGTGAATA TTTGGCTGTT GTTGTTTCAG AAGATAACAG ATTATTTATA
GGAAAAGCCG ATGCTTTTTA TAAAGGAACA GGAAAAAAAG CAGAAAAAGC AGCAATCGAT
GATTGTAAAA AAGGAAAAGA GGCAAATGGA AACGGAGTAA TGGGGGATGG TATAAAAGGG
AAAAAGTGCA GGCTTATCAG GTTGTTTAGT CCGAATTTCA AGCTGGAAAA TATTGAAACA
AAACAAAAAT ATGATTTGAA AGTTACCGGT TCATTATAA
 
Protein sequence
MRRLLLLVIL FGCMSVINLA AGCNAQICTC PGGGYVTYGQ YCPVNTPSYS APPDAPPVDM 
YYFILDIKNN SYQLVDLKTK NFLTALDRSL SCDRSTQVCT VVSIREYLAV VVSEDNRLFI
GKADAFYKGT GKKAEKAAID DCKKGKEANG NGVMGDGIKG KKCRLIRLFS PNFKLENIET
KQKYDLKVTG SL