| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1886 |
|---|
| Symbol | |
|---|
| ID | 8597354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 2013840 |
|---|
| End bp | 2014682 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003308674 |
|---|
| Protein GI | 269120497 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.979359 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACAGG AAGGAGTGAG TTTATTTATG AGCCTGATTA AAAGATATAA TGTAGAAAAC
AATATACTTA AACATTTTAT AAAGTTTTAC TGGTTTATGG AAAGTGATTC TGAAATCAGT
ATAGATAATA AGCTTCTTCC CGTGAATAAT ACCGATATAA TTATTAATTA TTCCAGTCCT
GTTACATATG AAAAAAACGG AAAGCCCGTT ATTCCTGACA GGGTTCATTT TAATGGGATC
AGAAGCAGTA CAGAGATTAT AAGGCAGAGC GGAAAAGTAA TGGTTTTCGG TATTTCTTTT
TATCCTCACG GGATATATCC TCTGCTGAAA ATACCTATGA GGGAGTTCGC GGGGAAAATA
GAGAATTTAG ACAATATTCT CGGAAATTTT TCCGGCTTTA TTGCTGATAT AATGGCAGAT
AATAATATTT CCGCAAAAGA GCGAATCAGG GTGATGGAAA AGATTATACT TGAAAAAATG
GATTGTGACT GTCTGGATAA CAGGGAAAAA AAGATATTCA GCGACTTTTA TGTTAATAAT
AAAGGTGTGA AGGATTTTTG CGTCAAGTCC GGAGTTAATA TAAAATATCT GGAGCGTTTA
TTTTTCAAAT ATACAGGAGT AAGCCCGAAA GTTTTCAGCC GTATTACGAG ATTTCAGAGA
ATAAGCAGAG AAATGCTGTA TTACAGGAAT TATAATAATC TTACCGAACT GGCTTATGAC
GGTGAATATT ATGATCAGAC GCATTTTATA AAGGAATTCA GGAAGTTCAG CGGAGTTACG
CCGGGAAAAT TTCTGAATGA CAGGGAAACT GTGAAGCATT TATTATCAGA GGGAGAATAT
TAA
|
|---|
| Protein sequence | MIQEGVSLFM SLIKRYNVEN NILKHFIKFY WFMESDSEIS IDNKLLPVNN TDIIINYSSP
VTYEKNGKPV IPDRVHFNGI RSSTEIIRQS GKVMVFGISF YPHGIYPLLK IPMREFAGKI
ENLDNILGNF SGFIADIMAD NNISAKERIR VMEKIILEKM DCDCLDNREK KIFSDFYVNN
KGVKDFCVKS GVNIKYLERL FFKYTGVSPK VFSRITRFQR ISREMLYYRN YNNLTELAYD
GEYYDQTHFI KEFRKFSGVT PGKFLNDRET VKHLLSEGEY
|
|---|
| |