Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1872 |
Symbol | |
ID | 8597341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 1999012 |
End bp | 1999596 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | pentapeptide repeat protein |
Protein accession | YP_003308661 |
Protein GI | 269120484 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000620101 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAG AATATGAGGA TAAAGAGTTC AAAAATTTGA AGCTCAAAAA TGAAACCCTT GAAAATCTCA GCTTTATTAA CTGTAGTTTT GTTAATTGCA CCTTTGAAGA CTGTAAGCTT ATCAGGACTT CGTTTTCTGA CTGCAGTTTT TATAAATGCG TAATTTCAAA TATTAAAACA CCAGGAAACT CACATATAGA AGATACAGAA ATTACAGAGT GTCAATTGAC GGGTATATAC TGGAATGAGC TGCTTCCCGA TTTCAAATTT GCCGATCCGA TCAGCAGACT GGAAAATTGT TATTTAAAAT ATAATACTTT TTCAGATATG GCTTTCAAAA AATTTTCATT TTCAGGAAAT ACTTTCTCTA ACTCCATGTT TGCAAAATGC CAGCTTACAG AATGTCTGTT TAATCAATGT AAACTGGAAG AAACTGAATT TTTGGAAAGT AATCTGCAAA AGGCAGATTT CAGAAACGCC ACTGAATATA AGATCGATAT TATGACATGT AACTTGAAGG GAGCCAGATT TTCATTTCCT GAAGCAATTA ATTTACTTAA TGTTTTAAAA GTCAAAATTG ATTGA
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Protein sequence | MKKEYEDKEF KNLKLKNETL ENLSFINCSF VNCTFEDCKL IRTSFSDCSF YKCVISNIKT PGNSHIEDTE ITECQLTGIY WNELLPDFKF ADPISRLENC YLKYNTFSDM AFKKFSFSGN TFSNSMFAKC QLTECLFNQC KLEETEFLES NLQKADFRNA TEYKIDIMTC NLKGARFSFP EAINLLNVLK VKID
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