Gene Sterm_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1872 
Symbol 
ID8597341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1999012 
End bp1999596 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content32% 
IMG OID 
Productpentapeptide repeat protein 
Protein accessionYP_003308661 
Protein GI269120484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000620101 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAG AATATGAGGA TAAAGAGTTC AAAAATTTGA AGCTCAAAAA TGAAACCCTT 
GAAAATCTCA GCTTTATTAA CTGTAGTTTT GTTAATTGCA CCTTTGAAGA CTGTAAGCTT
ATCAGGACTT CGTTTTCTGA CTGCAGTTTT TATAAATGCG TAATTTCAAA TATTAAAACA
CCAGGAAACT CACATATAGA AGATACAGAA ATTACAGAGT GTCAATTGAC GGGTATATAC
TGGAATGAGC TGCTTCCCGA TTTCAAATTT GCCGATCCGA TCAGCAGACT GGAAAATTGT
TATTTAAAAT ATAATACTTT TTCAGATATG GCTTTCAAAA AATTTTCATT TTCAGGAAAT
ACTTTCTCTA ACTCCATGTT TGCAAAATGC CAGCTTACAG AATGTCTGTT TAATCAATGT
AAACTGGAAG AAACTGAATT TTTGGAAAGT AATCTGCAAA AGGCAGATTT CAGAAACGCC
ACTGAATATA AGATCGATAT TATGACATGT AACTTGAAGG GAGCCAGATT TTCATTTCCT
GAAGCAATTA ATTTACTTAA TGTTTTAAAA GTCAAAATTG ATTGA
 
Protein sequence
MKKEYEDKEF KNLKLKNETL ENLSFINCSF VNCTFEDCKL IRTSFSDCSF YKCVISNIKT 
PGNSHIEDTE ITECQLTGIY WNELLPDFKF ADPISRLENC YLKYNTFSDM AFKKFSFSGN
TFSNSMFAKC QLTECLFNQC KLEETEFLES NLQKADFRNA TEYKIDIMTC NLKGARFSFP
EAINLLNVLK VKID