Gene Sterm_1871 details

Gene Information

• Locus tag: Sterm_1871
• ID: 8597340
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1998123
• End bp: 1998845
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 38%
• Product: ABC transporter related protein
• Protein accession: YP_003308660
• Protein GI: 269120483

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000629259
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAAAA CAGTTGATTT GACGAAAAAA TTTGGTGATA ATGAAGTTTT GACCAAGCTT 
AATGTAAATG TGGAACAGGG AGAAGTAATA AGTATCATCG GGCCGTCAGG TTCAGGAAAA 
AGTACATTTT TAAGATGTCT GAACGGACTG GAAACTATCA CAGACGGACA TGTATATATT 
GATGACTTTG ATATAGCAGG AAATGAACTT AATATAGATA AATTAAGAGA AAGAATAGGA 
ATGGTTTTTC AGTCTTTTAA TTTATTTCCG CACTTAAAGG TGATAGATAA TATAACTCTT 
GCCCCTGTTA CATTAAGAAA AATGAAAAGG GACGAGGCAA AGAGAGTAGC AAGGGAACTG 
CTTGATAAAG TAGGACTCCT TGATAAACAG GATGTTTATC CGTCAAGTCT TTCAGGAGGA 
CAGAAGCAGA GAGTAGCCAT AGCAAGAGCT CTTGCCATGA ATCCTGAAGT AATGCTTTTT 
GATGAACCTA CCTCGGCACT TGATCCGGAA ATGGTCGGGG AAGTTCTGCA GGTTATGAAA 
GATCTGGCAA AAGACGGAAT GACCATGGTA GTGGTTACGC ATGAGATGGG ATTTGCCAAG 
GAGGTATGCA AAAGAGTAAT ATTTATGGCA GAAGGTAAAA TAGTGGAAGA AGGAGCTCCC 
GATGATATAT TTACCAACCC AAAGCATGAA AGAACAAGAA ATTTTCTTGA AAGTGTATTA 
TAA 

 

Protein sequence

MIKTVDLTKK FGDNEVLTKL NVNVEQGEVI SIIGPSGSGK STFLRCLNGL ETITDGHVYI 
DDFDIAGNEL NIDKLRERIG MVFQSFNLFP HLKVIDNITL APVTLRKMKR DEAKRVAREL 
LDKVGLLDKQ DVYPSSLSGG QKQRVAIARA LAMNPEVMLF DEPTSALDPE MVGEVLQVMK 
DLAKDGMTMV VVTHEMGFAK EVCKRVIFMA EGKIVEEGAP DDIFTNPKHE RTRNFLESVL