Gene Sterm_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1852 
Symbol 
ID8597321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1984072 
End bp1985697 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content37% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003308641 
Protein GI269120464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTTCAA CAAGCAATTT ATCACTCAGA TTTGGAGGAA GAAAATTATT TGAAGATGTA 
AACATAAAAT TCACACCCAG TAACTGTTAC GGTATAATAG GAGCGAACGG TGCAGGTAAG
TCTACATTTT TGAAAATATT ATCAGGAGAA ATAGACTCTA CCGAAGGTGA AGTTATATCA
GCACCAAATA AAAGAATGTC TTTTCTGAAA CAGGATCACT TTGCATATGA GGAAGAAAGT
GTTCTGAATG TAGTTATGAT GGGACATCAA AAACTTTATG AAATAATGCA GGAAAAGGAT
GCTATATATT CTAAGACGGA ATTTACAGAT GAGGACGGTA TGAAAGCCGC AGAACTCGAA
GGAGAATTTG CCGAGCTTGA CGGATGGGAA GCAGAAACAA ATGCAGAAAA AATGCTTATC
GGATTAGGTC TTAGTGCGGA ATACCACCAC AAGCTTATGA AAGAGCTCAC AGAACCGGAT
AAAGTAAAAG TTCTTCTGGC ACAGGCACTT TTCGGTAATC CCGATATCCT GCTTCTGGAT
GAGCCTACTA ACGGTCTTGA CATAAAAGCT GTGGAGTGGC TGGAAAACTT TCTTATGGAG
CTTGACGAAA CTACAGTTTT AGTAGTTTCC CATGACAGAC ACTTTTTGAA TAAGGTATGT
ACACATATAG CAGATATTGA CTTTGGTAAA ATAAAAATGT ACGTAGGAAA CTATGATTTC
TGGTATGAGT CTAACCAGTT AATGCTGGAG CTTACAAGAA ACCAGAATAA AAAAATAGAT
CAGAAAAGAA AAGAATTACA GGAATTTATC GCACGTTTCA GTGCCAATGC CTCTAAGTCG
AAGCAGGCTA CCAGCAGAAA GAAACAGCTG GAAAAATTAC AGTTTGAGGA TATGCAGATT
TCTAACAGAA AATATCCGTT TATTGAATTT AAGCCTGAAA GGGAAGCAGG AAATAATCTG
CTGAAAGTAG AAGGACTTAC CAAATCAATC GACGGCGTAA AAGTACTGGA TAACCTTACT
TTTACTGTAA ATACCAATGA TAAAGTGGTT ATTTTATCTA GAAACGATAT AGCTAAAACT
ACTCTTTTCC AGATACTTGC AGGTGAACTT GAGCCTGATT CCGGTACATA TGAATGGGGA
GTTACTACAT CACAGAGTTA TTTTCCGAAA GATAATACAG AATTTTTTGA AAACTCTGAT
CTGACCCTTA TAGAATGGCT GGGACAGTTT TCAGAAGATC AGCACGAACA GTATCTGAGA
GGATTTCTTG GAAGAATGCT TTTCTCAGGC GAAGAAGCTA CGAAAAAAGC CAAAGTACTT
TCCGGTGGAG AAAAAGTAAG ATGTATGCTT TCCAAAATGA TGCTTTCCAA TTCCAATGTG
TTATTACTGG ATAATCCTAC TGATCATCTG GATTTGGAAT CTATTACTTC ACTGAATAAA
TCTCTTATCA AATTTCCGGG AACTATATTA TTTACTACTC ATGACCATGA GTTTATACAG
ACAGTGGCAA ACAGAATCAT AGAGATCACG CCAAACGGAC TTGTAGATAA AATGATGGAA
TATGACGAAT ATATAGACGA TGAAAATGTG CAAAAAAGAC TTGAAGAATT ATACGGCGAA
AATTAG
 
Protein sequence
MISTSNLSLR FGGRKLFEDV NIKFTPSNCY GIIGANGAGK STFLKILSGE IDSTEGEVIS 
APNKRMSFLK QDHFAYEEES VLNVVMMGHQ KLYEIMQEKD AIYSKTEFTD EDGMKAAELE
GEFAELDGWE AETNAEKMLI GLGLSAEYHH KLMKELTEPD KVKVLLAQAL FGNPDILLLD
EPTNGLDIKA VEWLENFLME LDETTVLVVS HDRHFLNKVC THIADIDFGK IKMYVGNYDF
WYESNQLMLE LTRNQNKKID QKRKELQEFI ARFSANASKS KQATSRKKQL EKLQFEDMQI
SNRKYPFIEF KPEREAGNNL LKVEGLTKSI DGVKVLDNLT FTVNTNDKVV ILSRNDIAKT
TLFQILAGEL EPDSGTYEWG VTTSQSYFPK DNTEFFENSD LTLIEWLGQF SEDQHEQYLR
GFLGRMLFSG EEATKKAKVL SGGEKVRCML SKMMLSNSNV LLLDNPTDHL DLESITSLNK
SLIKFPGTIL FTTHDHEFIQ TVANRIIEIT PNGLVDKMME YDEYIDDENV QKRLEELYGE
N