Gene Sterm_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1834 
Symbol 
ID8597303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1968081 
End bp1970906 
Gene Length2826 bp 
Protein Length941 aa 
Translation table11 
GC content37% 
IMG OID 
Productexcinuclease ABC, A subunit 
Protein accessionYP_003308623 
Protein GI269120446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATA AAATTATTAT AAAAGGAGCA CGAGAGCATA ATTTAAAAAA TATAAATATA 
GAGATTCCGA AAAACCAGTT TGTAGTAATA ACAGGTGTTT CTGGAAGCGG TAAATCTTCA
CTGGCTTTTG ATACTATCTA CTCGGAAGGT CAGAGAAGAT ATGTGGAAAG TCTTTCAGCA
TATGCAAGAC AGTTTATCGG TCAGATGCAG AAACCCGAAC TGGACAGCAT AGAAGGGCTG
TCACCGGCAA TCTCAATAGA GCAGAAGGGT GTTTCCAAGA ATCCGAGATC AACAGTGGGA
ACAATGACTG AAATATACGA TTATATGAGA CTTTTATGGG CGCATATCGG GGAAGCACAT
TGTCCTGTCT GCGGTGAAAA AGTAGAAAAG CAGACTATTC AGGAAATAGT GGATACAATA
ATAGACAGTA ATAAAGATGG TGATAAGCTT GTGATTCTTG CTCCGGTAAT TAAGGACAAA
AAAGGAACAC ATAAAAATCT GTTTCTGAAT CTCCAGAAAA AAGGTTTTCT GAGAGTAAGG
GTAAATGGTG AGATACTATA TCTGGAAGAT GTAATAGAGC TTGATAAAAA TAAACGACAT
AATATAGAAG TGGTAATTGA CAGACTGAAA GTAAAAAAAG ATGACAGCGA TTTTCTGGGA
AGATTTTCAG AAGCGGTGGA GACAGCTACA GGATTGTCAG AGGGTGTGAT TATAGCCAAT
ATAAATGATG TAGATCATGT CTACAGCGAG AATTTTTCAT GTCCGAATCA CCCCGATGTA
GTATTTCCGG AAGTGGTTCC GAGATTATTT TCATTTAATG CACCATTCGG GGCATGTGAA
GCGTGTAACG GAATAGGTAC TACACTGGAA GTTGATGAAA ATAAACTTAT TATGGATGAA
AATCTTTCAT TAAACCAGGG TGCTATTTAT GTTCCGGGAG CAAGTACGAA AAAAGGCTGG
AGCTGGGAAT TGTTCAAATG CATGACTGCA GCACATAACA TAGATATGGA TAAGCCTGTA
AAAGAACTGA CGGCAAAAGA GAGAGACATA ATATTTAACG GCTCAACTAA AAAATTTAAG
TTCAAATATT CGGGAGATTC ATTCTCATTT AATGGAATGA AGGAATATGA AGGAGCTGTA
AAAAATCTTG AAAGAAGATA CTATGAAACT GCTTCTGATT CTATGAAAGA TGAAATAGAA
GCAAAATATA TGATAGAAAA AACATGTAAA ACATGTAACG GTAAAAGACT GAAAGATGTA
GTACTAGCCA TTACTGTAAA TGATAAAAGC ATTATAGACA TAACAGAAGA AAGCGTAAAT
GATTCGCTCG GATTCTTTGA AAATATACAG CTTACTGAAA AGCAGATGCA GATATCAAGC
GAGATACTAA AAGAGATAAA AGAAAGACTG TCATTTATGA TAAATGTCGG TTTGGATTAT
CTGACACTTG CAAGAATGAC GAAGACACTT TCCGGCGGTG AGTCACAGCG TATAAGACTG
GCAACACAGA TAGGAAGCAG ACTTACAGGT GTCATATATG TACTTGATGA GCCGAGTATA
GGACTCCATC AGAGAGATAA CGAAAAGCTT CTTGCTACTC TTAAAGATTT GAAAGATATA
GGAAATACTT TGATAGTAGT AGAGCATGAT GAAGATACCA TGAGAGAATC GGACTTTCTT
ATTGATATAG GTCCTAATGC GGGAATACAC GGCGGAGAAG TAATAGCAAT GGGAACACCA
GAGGAAGTAA TGAAGTCAAA AGAATCACTG ACTGCACAAT ATCTGAACGG TGATATAAAA
GTAGAGATTC CGAAAGAAAG AAGAAAAGCA AAAAATAGTA TTGAACTGAA AAATGCCAAG
GGAAATAATC TGAAAAACGT AAGCATAAAA ATACCGTTAG AGTCATTTAC AGTAGTTACA
GGTGTTTCGG GAAGCGGTAA ATCTACTTTG ATAAATCAGA CTTTATTTCC GGAGCTGTTT
AACAGACTGA ACAGAGGAAA GCTGTACCCT CTTGAAAATA AAGGGGTAAA AGGACTGGAG
CAGCTTGAAA AGGTAATAGA CATAGATCAG TCGCCTATAG GAAGAACGCC GAGATCTAAT
ACTGCGACAT ATACAAAGCT TTTTGATGAT ATCAGGGATA TATTCGCCCA GACCAAAGAT
TCCAAAATAA GAGGATATGA TAAAGGAAGA TTTTCATTTA ATGTAAAGGG CGGAAGATGT
GAGGCCTGCG GCGGAGCCGG AATAAATAAA ATAGAAATGA ATTTTCTGCC TGATGTATAT
GTGGAATGTG AGGTTTGTAA AGGGAAAAGA TATAACAGGG AAACACTGGA AGTCCATTAT
AAGGATAAAA ATATTTCTGA TGTATTAAAT ATGTCAGTAG AAGAAGCATA TGAATTTTTC
CAGAATATTC CCGGACTGAA AAGAAAACTG GAAACATTAA TGGATGTAGG AATGAATTAC
ATAAAGCTGG GACAGCCTGC CACTACACTT TCCGGCGGTG AGGCACAGCG TATAAAGCTT
GCTTCCGAGC TGTCAAAAAT GTCAAGAGGA AAAACAATAT ACATTTTGGA TGAACCTACT
ACAGGACTTC ATTTTGAAGA TATAAGAAAG CTTCTTATAG TACTGAACAG ACTTGTGGAA
AAGGGAAATA CAGTAGTAGT AATAGAGCAT AATCTGGATG TCATAAAATC TGCCGATCAT
ATTATAGACG TAGGACCGGA AGGCGGATTC AGAGGCGGGG AAGTTATAGC TACAGGAACT
CCCGAGGAAG TAGCCAAAGT AAAAAAATCT TATACAGGAC AGTTTTTGAA AAAATATTTA
AAATAA
 
Protein sequence
MNDKIIIKGA REHNLKNINI EIPKNQFVVI TGVSGSGKSS LAFDTIYSEG QRRYVESLSA 
YARQFIGQMQ KPELDSIEGL SPAISIEQKG VSKNPRSTVG TMTEIYDYMR LLWAHIGEAH
CPVCGEKVEK QTIQEIVDTI IDSNKDGDKL VILAPVIKDK KGTHKNLFLN LQKKGFLRVR
VNGEILYLED VIELDKNKRH NIEVVIDRLK VKKDDSDFLG RFSEAVETAT GLSEGVIIAN
INDVDHVYSE NFSCPNHPDV VFPEVVPRLF SFNAPFGACE ACNGIGTTLE VDENKLIMDE
NLSLNQGAIY VPGASTKKGW SWELFKCMTA AHNIDMDKPV KELTAKERDI IFNGSTKKFK
FKYSGDSFSF NGMKEYEGAV KNLERRYYET ASDSMKDEIE AKYMIEKTCK TCNGKRLKDV
VLAITVNDKS IIDITEESVN DSLGFFENIQ LTEKQMQISS EILKEIKERL SFMINVGLDY
LTLARMTKTL SGGESQRIRL ATQIGSRLTG VIYVLDEPSI GLHQRDNEKL LATLKDLKDI
GNTLIVVEHD EDTMRESDFL IDIGPNAGIH GGEVIAMGTP EEVMKSKESL TAQYLNGDIK
VEIPKERRKA KNSIELKNAK GNNLKNVSIK IPLESFTVVT GVSGSGKSTL INQTLFPELF
NRLNRGKLYP LENKGVKGLE QLEKVIDIDQ SPIGRTPRSN TATYTKLFDD IRDIFAQTKD
SKIRGYDKGR FSFNVKGGRC EACGGAGINK IEMNFLPDVY VECEVCKGKR YNRETLEVHY
KDKNISDVLN MSVEEAYEFF QNIPGLKRKL ETLMDVGMNY IKLGQPATTL SGGEAQRIKL
ASELSKMSRG KTIYILDEPT TGLHFEDIRK LLIVLNRLVE KGNTVVVIEH NLDVIKSADH
IIDVGPEGGF RGGEVIATGT PEEVAKVKKS YTGQFLKKYL K