| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1833 |
|---|
| Symbol | |
|---|
| ID | 8597302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 1964508 |
|---|
| End bp | 1967654 |
|---|
| Gene Length | 3147 bp |
|---|
| Protein Length | 1048 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | outer membrane autotransporter barrel domain protein |
|---|
| Protein accession | YP_003308622 |
|---|
| Protein GI | 269120445 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TTAAGAAAAA TAAACTTTTG ATCGCTTTTA TGGCAGTAAT AATAGCAAAT
TCAGCTTATG CAGAAAAATC AGATGAAAAT GAACTTATAA TTCTGGGAAA TTATTTTAAA
AACCATAATA ATCCGAAAAA GCAAAATGCA GGAGGAGGAA TTACAGTTCC GACGGATCCG
GATAATAATA TACCGGATAA TGACGACCCA GAGGAACCAG ATAATCCTGT TGATCCCGAT
GAACATATAA TTCCGGTAGA TCCTGTTAAA TTAGTAGTGG TAAAGGAGAA TGACAAGGAA
AGTGCCTGGA AATTACAATA CGGAAATAAT TTGTCTTACA ATGTTTCGGG GGATATATCA
TCTGTTAACA CAACAGCCTT ATGGATGACA GATCGAAATA CTGTAGTTAC AAATAATAAT
ACTTTGGAAT CTGATTACTC CACAACAAAT GAAAATAATA ATCAATATAC AGTACATGTA
GAAAATAATG CTTCTTTTAT AAATAACGGA ATAATAAACG GGAACAATGT AATAGGAGTA
TATCTGGAAA ATGCAGATTC TTTTGAAAAT AGTACAGGTG CAAGTATTAA TAATACAGGC
AGCTATGGAG TAAGAGCATT TAACACAAAA GAAATAAAAA ATAACGGATT GATACAAAAT
ACGGGTGATT ACGGTCTATA TGCTTCAGAT GTTTCGTATA TAGAGAATAA GGAAAACGGG
ATAATAGCCA ATATCGGAAA CTATGGTGTA TTTTTAAAGG GACAGGACAG TATTTTTATA
AATAATGGAA CAATAGCTAA TAGTGGAAAG TATGGTTTAC ATATAGTAGA TGGTTCCGCA
ATTAATTACG GGATCATAGA GAATAATAGT TCTTGGGGAA TAAAATCTGA TGAAAATGCT
ACAGCAGAAA ATTACGGGAT AATCAGAAAC GGCAGTTCTG CCGGTATGGG TGCAATAAAC
GGCGGTACGG TAATAAACCA TAGTGATGGA GTGATAAGCA ATCTTGGCGA AAACGGAATG
TATGCAACTT CTAATTCCAA AGCGATAAAT TACGGTATAA TTGAAAATCT CAAGTCAGTG
GGAATGATAA TAAGCGGAGA AAATGCTTTA GGAATAAATA ACGGAGAAAT AAGATCAAAT
GGTGTTTACG GGATGCAGGG AGATTACTCG GGAGAAATAA TAAATAACGG GAAAATAATA
AATAACGGGA ATTTTGGAAT GCTGATTTTC GACGACGGAA CACGGGCAAT AAATAATAAT
GTCATAGAAA ATAAAGGAAA TAATGGTATG GGCATGATGG AAGGCAGCGG ATATATAGAA
AACAACGGAA CGATACAAAA TACTGGGGAT AATGGAATTT CTGTGAATGG AAGCGGTTAT
GCAAAAAATA ACGGAACAAT AAAAAACTTA GGGGATTATG CTACGTCTGT TACTAGTACT
GGAATAATAG AAAATAACGG AATAATAGAG CTGACAGGAG ATAACAAAAC AGGGATGACG
ACAACCGGAG GCGGTATTTC TATAAATAAC GGAACAATAA AAATGAATGG ACAAAATACT
GTAGGAATAT ATGCTTCAAA CGGGACTGTA ATAAATCAGG GAAATATAAT AATAAATGGT
TCAGGACACG GGATAGCGGC ATATAATAAC AGTCATGTTA TTTTGGGAGA AGGGAGTACA
ATAACAATAA ACTCTTCGTC ACAGACATAT AACGGAACAG AAACAGGAGG AGACGGGACT
TATGTTTATG TGGATGGAAC TTCTGATATA AATAACAAGG GTGTGATAAC TTCCGACTCA
AGAATAACAG TGGATGGAAA CGGAAAATTT GTAGTAAATT CAACTGCCGG AGGATTAAGG
ACAAAAAAGC TGATTTTGAA TAATAATTTA TATATGGGCT CTGAAGCAGT TATGAATTCA
TCAGAGGATA AATATGTTCT TAAAAATATA GATGCTGATG AGATAACAGG AAACGGAAGA
ATTTTATCAG ATTCAATATT TTTTGAGACA GAGACAGAAA AGAAAAATGA CGGCTATCAG
GTAGTAATGA AAAGAATAAA ATTTAACAAT CCGATAAAAA GTACATTAGG AGAAGTTCTT
GAAAATAATT ATTCAGGTTC TGAAAATGAT GCTCAAAAGA ATAAAATTTA TAATTCCCTG
AAAGCAATAA CAGACAGTCA GAAATTGCTG ACTGCCGAAG ATGAAATGAC AGGAAGTTCA
GCAGTAAATA ATCAGACGTA TCAGTTATTC ACTCAGGACA GACTAATATC ACAGGGGATA
GATCAGCTTA TGAGCAGAAG GACCGAAAGT GTAGATAATG GAATATATGC TAATTTTCTT
TATAATCAGA CAAAGGCAGA TACAAAAAAC GGATTTGAAG GATATAACGG AAAATCAACT
GGAATTATAC TGGGCGGAAT GAAAAAAATT ACTGAAAATA CTGCTGTAGG AGGATTTTTA
GGTTACCTTA ATACAGATAT AAACTATAAG GATTCATCAA ATACCCAAAA ATTAGAAACA
TGGTCATTGA CAGGAGCTTT AAATACAGAG CTTACAGATA AAATTCTATG GAGAAACAGA
GTTAACTATA ACTTTGGATC TAATGATTCG GAAAGAAGAA TAACTTTTGA TAATTCAAAC
AGAGAAGTTA ACAGTTCATT TGATTCATGG TCTGCAGGAG GAGTATCAGA GCTGGAGTAT
ACGCAGAAAA TAAATGATAT TATATCATTT AGACCGTCTG CAGGAGTAAG GCTGGATTAT
CTGAAAGAAA GCGGATATAC TGAAAATGGA GCAGACGGGC TGAATCTAGA AGTAGATTCC
AATGATGCTT TCTCAGGGAA GATTGGCGCA GGAGTAAAAG TTGATATTAA TGCTTATAAA
GGACAGAATT CCGCACTTAA GCTTACGCCG AACATGAATT ATGCATATGA GCTCGGGAAT
CCTTATGACA AAAGAGCTGT AAAGTTATCA GCTTTTGAAG GAAAAATGGA TATTAATGAA
AGAGATACAG GAAAAAATTC TTTGAATCTT GGTCTTGACC TGGAGTATAA TTATAAGAAT
AAATTTTCAG TTTATGCGGG TTATAATGCC GGTGTACTGT CAGATAAAGA TTCTGCCTTT
ACAGCAGGAT TTAAATATCA GTTTTAA
|
|---|
| Protein sequence | MKKFKKNKLL IAFMAVIIAN SAYAEKSDEN ELIILGNYFK NHNNPKKQNA GGGITVPTDP
DNNIPDNDDP EEPDNPVDPD EHIIPVDPVK LVVVKENDKE SAWKLQYGNN LSYNVSGDIS
SVNTTALWMT DRNTVVTNNN TLESDYSTTN ENNNQYTVHV ENNASFINNG IINGNNVIGV
YLENADSFEN STGASINNTG SYGVRAFNTK EIKNNGLIQN TGDYGLYASD VSYIENKENG
IIANIGNYGV FLKGQDSIFI NNGTIANSGK YGLHIVDGSA INYGIIENNS SWGIKSDENA
TAENYGIIRN GSSAGMGAIN GGTVINHSDG VISNLGENGM YATSNSKAIN YGIIENLKSV
GMIISGENAL GINNGEIRSN GVYGMQGDYS GEIINNGKII NNGNFGMLIF DDGTRAINNN
VIENKGNNGM GMMEGSGYIE NNGTIQNTGD NGISVNGSGY AKNNGTIKNL GDYATSVTST
GIIENNGIIE LTGDNKTGMT TTGGGISINN GTIKMNGQNT VGIYASNGTV INQGNIIING
SGHGIAAYNN SHVILGEGST ITINSSSQTY NGTETGGDGT YVYVDGTSDI NNKGVITSDS
RITVDGNGKF VVNSTAGGLR TKKLILNNNL YMGSEAVMNS SEDKYVLKNI DADEITGNGR
ILSDSIFFET ETEKKNDGYQ VVMKRIKFNN PIKSTLGEVL ENNYSGSEND AQKNKIYNSL
KAITDSQKLL TAEDEMTGSS AVNNQTYQLF TQDRLISQGI DQLMSRRTES VDNGIYANFL
YNQTKADTKN GFEGYNGKST GIILGGMKKI TENTAVGGFL GYLNTDINYK DSSNTQKLET
WSLTGALNTE LTDKILWRNR VNYNFGSNDS ERRITFDNSN REVNSSFDSW SAGGVSELEY
TQKINDIISF RPSAGVRLDY LKESGYTENG ADGLNLEVDS NDAFSGKIGA GVKVDINAYK
GQNSALKLTP NMNYAYELGN PYDKRAVKLS AFEGKMDINE RDTGKNSLNL GLDLEYNYKN
KFSVYAGYNA GVLSDKDSAF TAGFKYQF
|
|---|
| |