Gene Sterm_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1807 
Symbol 
ID8597276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1942229 
End bp1943035 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content35% 
IMG OID 
Productcell wall hydrolase/autolysin 
Protein accessionYP_003308596 
Protein GI269120419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TTATCAAAAC AGCATTTTTA CTGATGATGA TTATGGTAAA TACTGCAATG 
TGCATGGGGA ATACAGGAGA AAAAGCAAAA CAAAATATAA CTTCTTTTTT TGAGAATACA
GACAGTCTGA AAGTGACAAA TCCTTTGATA AGTGAAAGTA AGAGAACTAA CAGTCAGGGA
GAAAGTATAT GTATAGACCC CGGACATCAG AGAAAAGGTA ATAACGGGAA GGAAGAAATA
GCACCGGGTT CGAGTATTAC CAAGCCGAAA GTTTCGTCGG GAACTTCCGG AACTGCAACA
AAAAAAGACG AGTATGTACT TACTCTTGAA ATTGGTCTGA AATTAAAAGA AAAGCTCGAA
TCAGAAGGAT ATAATGTAAT AATGACAAGA GAGACACATG ATGTAAATAT AAGCAATAAA
GAAAGATCAG TTATGACGAA CAAGGCGGGA TGTTCACTTT ATATCAGACT GCATGCCGAC
GGGTCGGAAA ACAGAAATGC AGCAGGAATT TCCGTACTTA CATCATCATC TAAAAACCAA
TATACACAAA AGGTTCAGGC TTCAAGTGAC AGATTTTCAA AAATAATACT GGAAGAAACA
TTGAAAACTA CAGGGGCTAA AAACAGAGGT GTAAGCTACA GAGATGATCT TACAGGAACA
AACTGGTCTA CAATAACAAA TACTCTGATA GAAATGGGAT TTATGTCAAA TGCTGAAGAG
GACAGAAAAT TATCAACACC TGAATATCAG AATAAAATAG TAAACGGAAT AGTGAATGGA
ATAAACAGAT ATTTAAAAGA AAAATAG
 
Protein sequence
MKKVIKTAFL LMMIMVNTAM CMGNTGEKAK QNITSFFENT DSLKVTNPLI SESKRTNSQG 
ESICIDPGHQ RKGNNGKEEI APGSSITKPK VSSGTSGTAT KKDEYVLTLE IGLKLKEKLE
SEGYNVIMTR ETHDVNISNK ERSVMTNKAG CSLYIRLHAD GSENRNAAGI SVLTSSSKNQ
YTQKVQASSD RFSKIILEET LKTTGAKNRG VSYRDDLTGT NWSTITNTLI EMGFMSNAEE
DRKLSTPEYQ NKIVNGIVNG INRYLKEK