Gene Sterm_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1794 
Symbol 
ID8597263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1931034 
End bp1931435 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content36% 
IMG OID 
Productcytidine deaminase 
Protein accessionYP_003308583 
Protein GI269120406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000395488 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAACT TATCTGAAAA GGAAATACTG GAGCTTATTG ATGAAGCTGT AGAGATTTCC 
AAAAAAGCTT ATGTTAATTA TTCACATTTT CCTGTAGGAG CAGTTCTTAT AGATGAAAAC
GGAAGAAAAT TCAAAGGGGT AAATGTAGAA AATGCCTCAT TCGGATTATC ACTCTGTGCC
GAAAGAAATG CTATTACCAC TGCTGTTACA GACGGGATGA AAAAGATAAA AACACTGGTG
GTTACAGGAG ATACTGATAA ACCAATCAGT CCATGCGGAG CATGCAGACA GTTTATGCTG
GAATTCGCTG ATGAGAATAC AGTAATAATA TTGTCTAATT ATAACAGGGA ATATAAAATA
TGCAGTATGG AAGACCTGCT TCCTTATTCG TTTAAGCTTT AA
 
Protein sequence
MVNLSEKEIL ELIDEAVEIS KKAYVNYSHF PVGAVLIDEN GRKFKGVNVE NASFGLSLCA 
ERNAITTAVT DGMKKIKTLV VTGDTDKPIS PCGACRQFML EFADENTVII LSNYNREYKI
CSMEDLLPYS FKL