| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1781 |
|---|
| Symbol | |
|---|
| ID | 8597250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 1916020 |
|---|
| End bp | 1917729 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003308570 |
|---|
| Protein GI | 269120393 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACA GAGAATTCTG GAATTTGATA AATGAAAGCT GCAGGCTTGC GGGAATGGAT
AATGACAAAT ATCTGGAAAT ACTGGAGAAT AAGCTGTCCA AGCTGGATGT TGATGAGGGA
TATCAGTTTA ATTATTATGT GGGCTATTAT TCAGGAAAAG CCGAGGAAAA TCCAAAGCTT
GCACTTTTAA TGAAGGTAAT AGAAGGAAGC GTAACAGACG ACTCACTGCT GTATTTTGCA
GTATGGCTTG TATCCAGAGG AGAGAACATC TATTTTGAAA CTTTGAAGAA TCCTGATAAA
TTTATTACAT TGATAAATCC CGAAACTTTA TCAGAATTTG AAGGTCATTA TTATGCTCCT
GAGTTTGAAC TGCTTATGTA TGTCGGCAGA AATGAAGAAG AATATGATGC AGAAGGAGAA
ATACCGGAAC AGGAATATAA ACTTATAAAT AAAATTTATA GTGACAAAAT TCCGGAAGAT
AATAGGAATT ACTATGATTT AGTAAGGGAT ATTGATAAAA TTCTTCCAAA AACTATGAAA
TTTTTTGACT TTGACAAAGA GCTTCTGGAA GAATCTTTAA AATATGAAGA AATGGAAAAA
AATAATTTCT CCAAAATAAA GAATGAAGAG GAAGAGTTTC TAAATGAATT AAAAAAGCAA
TGGACTTTTA CAGAGTTAAA GAAAACTATT TATGAATTAG AACGGACTAA AAGAAGTGTC
CCTGTAGCTG TTCCAATGCC GCCGTATAAT GACAGCATTA TTATGTATAC GACAGGGTTA
AATAAAGCTA AGGATGGTTT TATTATAAAA AAATGTTACT GGCATAATTA TAAAACCGGG
GAGAATAAAG ATATAAAAAA TACAGGCAGT GGGGAATATC TGGCAGGAGA TGACAAAAAT
ATATATTTTT ACAGCGGGAA TTTTGAGGAG AGTCCTAAAA TATCCGTTTA TAATTTTGAA
TCTAATGAAT TTTCTTCTAC AGATATTATT GACAATGACT TTGATAATAA TAAAACGGCT
GCTGTAATCA CTATGATAGG AAAAGGAAAA AATAAGTCAG GAGTAATACA TAACGGGAAA
CTGTATTTCT CTTTAATAAT ATATGCAAAT CCCAGAACAC ATCATATATT TAAATTTTAT
AAAGAAAAAT CTTATGTTTA TGATATAACA GAAAATCAAA TATCTTTATT AAGGGAGAAT
ATATCAAAAA TAAGATTTTA TCAGGATAAA ATGTATTATT TGGAACTGGG GGATCATGCT
GATGATTATA CTTATTATTA CAGTCCGAAA ACTTTGATTT GCAGAGATAT GAAAAATAAC
AGGGAAGAAA AAATAGCAGA AAACGTATCA GATTATGCAT TAGATAACGG AGTAGTCTAT
TATTCACATA TAAAGGGGGA AAAGATACAT GATTTGGTCA GAGTGGAAAA TGGAAGCTCT
GATATAATTC TTAAAAATCA AATGTATCTG GATGATTTTA CTGCGGCAGG CAATAATATT
TTTCTGTCTT TCTATTTATC CACTGGAAAC GGAGGCTATA TTCATTCGTT TATTCTGAAT
ATAAAAACAG GGAGTATATG CGAAGTAGCA GGCAGCAGTC AGCCGCATGA ATCAATTGTC
TATGAAGATA AATATACAGC TGTCGAGAAT ATTTATGACG ACAGGAAAAT CTTTTTGAGA
ATTTATGAAT ATGAAATGGC TGAAAAATGA
|
|---|
| Protein sequence | MTNREFWNLI NESCRLAGMD NDKYLEILEN KLSKLDVDEG YQFNYYVGYY SGKAEENPKL
ALLMKVIEGS VTDDSLLYFA VWLVSRGENI YFETLKNPDK FITLINPETL SEFEGHYYAP
EFELLMYVGR NEEEYDAEGE IPEQEYKLIN KIYSDKIPED NRNYYDLVRD IDKILPKTMK
FFDFDKELLE ESLKYEEMEK NNFSKIKNEE EEFLNELKKQ WTFTELKKTI YELERTKRSV
PVAVPMPPYN DSIIMYTTGL NKAKDGFIIK KCYWHNYKTG ENKDIKNTGS GEYLAGDDKN
IYFYSGNFEE SPKISVYNFE SNEFSSTDII DNDFDNNKTA AVITMIGKGK NKSGVIHNGK
LYFSLIIYAN PRTHHIFKFY KEKSYVYDIT ENQISLLREN ISKIRFYQDK MYYLELGDHA
DDYTYYYSPK TLICRDMKNN REEKIAENVS DYALDNGVVY YSHIKGEKIH DLVRVENGSS
DIILKNQMYL DDFTAAGNNI FLSFYLSTGN GGYIHSFILN IKTGSICEVA GSSQPHESIV
YEDKYTAVEN IYDDRKIFLR IYEYEMAEK
|
|---|
| |