Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1729 |
Symbol | |
ID | 8597198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1849912 |
End bp | 1856625 |
Gene Length | 6714 bp |
Protein Length | 2237 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003308518 |
Protein GI | 269120341 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.737065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA AAAATTTTTT GATGTTTTTT CTGGCGGTAA ATGCTTTTGC TGTTTCCCAA GGAGCAGCAG AAAGTATAAA ACGTCCGGAA AAATATGAAA AACTTTATAA CGGGATGGTC CAGAACATAG AAGCTGGAAA ATCTAACGTA AAAAATTATG AAGTATTGGA AAAAATACTT GAAAAAAGAA ATAAAGAGCT TAAGGATCTC TATGAGCAGA GTGATTACAT CGTAAAACCC GAGTATCTGG AATGGCAGAT ATTTTTCAGC GGTTTTTATT CTCACAGAGA ATCGGGGGAT AACACACTTG CCAATGGTAC TTACCACTCT GATCCGAGCA ATGTAAACGG AAAATTTTAC ACAGCTCTGG GAGAAGCAAA GCAGGTAGAT CTGGGATTAT ATATTCCAGA GCGTACTATA AAAAGAAGTC CTGTAGAATT AAAACTGGTA AGTCCTCCGG AAATAAATCT GAGCAGTCTT GATGTAAATC CGGAAGTGAA CCCAAGCGTA AGTCCGGATG CTGCTTCGGG TACTTATAAG GAATATACGC CTGTCGGCAG TATGAAAAGC TTTCTTGAGG CTTATGAGAA TGTTTTTAAG TCAGAAACAA ACAGCCAGCT AAAAGATGAC GGAGTTACAG AGCTTATAAA TTCAGGAGAT CCCAGTAGTT CTTACAAAAT AAATTATAAT GTAAATACTG GTTTAAATAT AACTTATGAT ACTGTAACAG ATTCTTTTAG TGAGAATAAA CTTTTTACAA ATGGTGATTC TCTGGTAACT TGGGGAACGA ATTCAATAAC GACTTCTTAT GGAAATACTG CAAATGATCC TGCATTTTAT GGAGGAGGAA CACGGGTAGC GGGAGTTTAC GGCGGAACTG GCAACAGTAT TACGAACAGC AATCAGATGG ATTTAAAAGG ACCGTTTACT TATGGAATGG TTGCTGAAGG TGGTAACAGC AATACTTTGA TTAATAATTC CACAGGAATA ATAAGTGATG ATAAGGAAAA TGATATTACC GATACATGGT ATAATAATGA AATCCCTCAT ATCGGGGAAA CTATAACTTA TACTCAGGAA AAAACAACTT CAGATCCGAA TATAGTAATA AATGATCCAT ATAGAACAAC AACAGTATCT AAACATCCAG ACGGAAACAT AATATATGTA AATGGAAGAC CTGTATACAG ACATGGAGGG ACGGCGACAA ATCCTGATGT TTCGTCAACT GTGACAACAA TTGATTCGAT TGATTATACA CGAACAACTT CCGTTACTTC ATATACAGGC GGATATCTCG GATATAAAGT GGGAATGTTT GTAAACAGTA ATTTGAATCC GATAAATACA ATCATACAAA ATGACGGTAA AATTAAATTT AACGGTTATA GTTCAATAGG TATGTATACT TCTGCCGGTG TCAGATTATC TGATGTTCAG ATGCTCAATA CAGCAACTAT AGATATAAAT ACAGGCAATT ATACTGGATA TTCTAATTTT GGAATGAAAC TAGACGGCGT TGTTAATAAC GACCAGACTA AAAAAATAAT TTCAAATACC GGAACAATTA GCATAAGTAA CGGAGCCGGT ATAGCAGTAG TAAACGGAAG CGTCGGAGAA GGCTTTGTGG AAAATTCGGG GACAATCACT GTAACAAATG GAACCGGAGT TTATCTGGCA CCAGTGTCAA CTAGTGCAAG ATTAGAAGAT GCGGTAAATA CAGCTTCCGG AATTATTGAT GTAACTTCCG GAGCCGGAAT GTACGCTTTA GGCGGACGTG ACGAAATAAC AAGAGTTATA AATAACGGGG AAATATCTGT TTTAGGCGGA ATGGGTATGG TTGCTTCGGG TAAAAATGCT GAAGCAGTTA ATACAAGCAA TGATTTTAAA ATAAAGACTT CTACAGGCGG CTTCTATGCA CATAACGGCG GAAAGGTCAT TAATAGTGCA GATTTGACTG TTAATTCTTC AGGAGTATCC CTGTTTAATA TTGATGTTAA TTCTGAAGGA AGCAGTGTAG GAAATATAAT AATGGACGGT ACCAATTCAG TTGCTGTTTA TAATAAAGGG AAATTTACAT CAACTGGCGA TATTGATATA GCCAAAAGCG GGTCAATTGC TGTATATAGT ACTGGAACAG ATAATACAAA TATAAAAGCC GATACTATAA AACTTGACGG AGCAAAGGGA GCAGCATTTT ATACAGACGG CGGAAAAATA AATATATCTC CGAATACAGG GACAACAACA GCTGTAACAG TGTCAGGAGA CTCGTCATAC TTATTTTATG ACAGCAGCTT TAAAACAGGA GCTGTTCCAA ATCAGACTTT TGTAATAGAC GGAAATTTTA CTGCTAATGT AAAAGATGGG GCTATAGCTT TTGACTTTAA AAATAATTCA GGAAATCTTA TAGATTATGT AAAAAATAGT CTTTTGAATA TAAAGAGCGG AACAACAACT ATTAATATAG AAGGAACAGC ATTTCATGCA AAAAATTCCA CTATAAGTAT TGATGAAGTT TCGCAGATAA AAACAACTGG CGGTCTTGCA TCAGGCTCTG TCATATTAAA AGGAAGCGAT GTATTTTATG CAGAAGAAAG TACAATTAAT ATAGATCAGG ATTCTGATCT TGATGATTCT GCGGATACAT ACCAAAAAAA TCAGAGTCAT ATAGCAAATT CAAATGTAAA TCTTCTGTCT GGCATGACTA TATCGGGAAG TAAAAATGAT CAGTATGGAA TCGGGCAGGA AGATTACAAA AACAGCGGTG TTACTTTAAC AAATGCCGGT GATATAATTC TTACAGGATC AGGAACTACC GGAATATACG GGAATAATGC AAAAATTATA AATAATGGAA ATATAACAAC TGGAGACAGC AGTACAGGAA TTTTTTCATC AAATAATGCA GAAGTTACAA ATACCGGAAA TATAAACTTC GGGAATTCCG GTATAGGAAT TTACGGGATA AATACTTACG GTTCCAAAGT ACCTTCTTCC GGTTCCAAAG TACCTTCTTC ATTTAATAAA ATAAATATAA CGATGTCATC GGGAACTATA ACAGCTGACG GTACTACAGA AGGCTACGGT ATTTTTGCGA ATAATTCAAA AGGATATGGA TTTTCTGAGG TAAACTTCGA TGGAGGGTTA ATTGATCTCA GCAAAATTTC TGCTGCGGAT AAAAGCAAGG CAGTGGCTGT AGCTGTAAAG GATACAGACT TAAGCTCGTC AGGAAATATT AATACCGCTG AAAACGGAAT AGCTTTTTAT ATAAACGGAG GAAATACAAG TATAACAGGC GGTACTATTA ATTTAGACAA AGATAATTCA ATAGGTCTGG CTCTTCAAAA TATAGATACA AGCAGTTTTA CAGGTACAGG AGCTGCATTT AATATAGATG GAAACGGTGT AATTCTTTTT CATTTAAAAG ACTCAACAGG AATAAAGGAT GATTTTACGG TAAATGTTGC ATCAGGTTCT AATTACAGAT ATGCAGATAT GAAAAACAGC TCATTTACTT TTGATAAATC CTTTAGTATA GAGGATAATA TAAATCTTAT AGTTGCTGAT GCTTCGGCTG TTCTTCTGGG GACAAGCTCG GATATTAGTT CCGCAGGAAC GGGAAATATA GGGGTATATG CTAAAAATAA AGCTTCAGCT GCAGTTTTAA GTTCTCTCGG GGTTTCAGAC GAGATAACAA ACAAAGGAAA AATCAACTTG GGGGATTCTT CTACAGGAAT TTATGCAGAA GGCGGTGCCG GATTATTAAA TGAAACTGCC GGAATCATTA ATGTAGGAGA TAATTCACAG GGGATTTATG CAAGAAATTC CGGATCAGCA GTAAACAGAG GAAAAATAAG CATCGGAGAT TCTTCAATAG GAATTTATTT TAATAATGCA TCTGCAGCAG TCAATTACGG AGATATAACA AGCGGCTCGG ATAATGGCGT GGCGGTTTAT ATGGATGATC AGACAGCAGG CTTTAGAAAT GACGGTCTGA TTTCATTAAG CGGTCAGAAT AATATAGGTA TTTACGATAC GGGAACTGGT ATCAGAGTTA TTGATAACAA CGGGGAAATA TCAGTAGGAG ATTCAGCTTC GGCAGACAGT CCGAATGTAG GTATATATTC TGTAGACGGT TCTCTGACAA TAAATCATAA TACAAATGCC AAAATTACTG CCGGAATAAA TTCAATGGGA ATTTATGCAA AAAATACAAA AATAAATGCA GAGGGAATAA TAAATATTGG AGATAACGGA ACAGGAATAT ATGCTGATTC GGGATCAAAT GTGTATCTCG GCAGCAATGC AAGGCTGAAT CTGGGAGCTG TAAATGCAGC TGGAGTATAT GCACTCGACG GGAGTATCGT CGATAACTAT ACTTCTAATA TAATATATCC GTCGGATTCT TATGCATTTG TACTGAATTC AGGGGCAGTT TTAAATAATT ATGCTGCAAA TACCATGCTT GATAACGGAA AAGTATACGC ATATTCTGAT AATGCAGTAA TAAATAATAA GGGGAATTTT ACCCTGACAG GTACTGATAA TATAGTTTTA TACGGAGTTA ACAGCTCTGC AGTAACTAAT TCAGGAAAAA TAGATGCAGG CGTAACTCAG GGAAGCAATA TAGGAATATA TGTAAAAGAA AGCAGTGCGG TAAACAGCGG AAAAATAATA ATGGGAGATT CTGTTATTGT TGATGAATAT AATCCTTTTG TAAATAAATA TTCAGTAGCA ATATATGGAG AAAATTCCGA TATTTTAAAT GATACAAACG GTTCTGTTTC TGTCGGAGAA AACTCTGCCG GATTATATGC AGTAGGCGGA AGTATAGTAA ATAAAGGGAC GGTAACTTCT GTAAAAAACG GTGCAATCGG AATATTTATA GATAACGGTA CTGCAGAAAA TACAGGTCTC ATAGATTTAT ACGGAGCTGA TTCAGTAGGG CTTGCAGGGA AAACAGGGGC AGTACTTACT AACTCGGGAA CAATAAGAAT TCATGGAGAT AATTCCATAG GGATTTTTGC AAATTTAAGT TCTTCGGTAA TAAACAAGGG AACTATTGAA GTATTGGGGA ATAACAGTAC AGGAATACAT CTTCAGGGAA ACTCGGTACT TTTGAATGAA GGAACTATAG TACTCGGATC AAATCTTTCG GAATCTGTGA AGGTATCATA TTCAACAGGA TACGACATAC CTGAAATACA GAATGCCGGA ATAATAAAAG TATCCGAAAA ATTCGAAGTT CCTGCTGATT TTCAGATTTC AATAAAGCCG GCTCCTTCTT CATTCAGAGA ACCGACTGCA TCTGAAATAT TCTCAGATAA TTATGCTCTT GAAGATATCG ACGGAAGATA TTTGATATCA AATGCAGTAA GCTTTGTGGC GCCATATTTT GCCGCGACAG AGCCTGTAGT AGTACTGCCT GATTTTTCAC AGCATACAAA TGCACTGGCA TATAAGCTTG AAGATGTTTT TGTTCCTACC ACTCCTGACG GAGGACCGAA TTCAGGCAAA GTAAGGGTAA AAAGCAAATC TATTACATGG GATGTTATTC CTGATGAAAA TGCTGACGGA AATATAGATC TCTGGATGGT GAAAATTCCT TATAATGTTT ATACTAACGG TCTTTGGTAT GACGGCTTCG GAAAATCGCT AGATGCAAAT TATGCCGGAG CAAATGCAGA AGGAATAGAA ATCTTCGATA AAATAGATTA TATAGATAAT GAAAAAGATC TAAGACATAT TATGGCAAGT TTGGGAGGAA GTGTATATTC CAATATAAAC CAGAGAGAGG AAGATATAGC AGAGGTATTC GAAAGCTCGC TGGATCTTCT GCAAAGCTCG CATAATAATA CAAAAGAAAA TGTGAAGATA AATGTAATTG CCGGAAAAGG AAACAGAAAA GAAAAGACAG ACGGTGTGGA AGAGTATGAT TCTGCATATA CAGGAGTAAT GGCTCTGAGA GAAGTAGAAA GAACATACAG ACATACTTTC GGATATTCGG CAGGATATCT TCATTCAGGC TTTGAATTCA AAGACGGCAA TGAAAGCGAA GAATGGGTAG ATACATTGCA GCTTGGAGTT CACAGTAAAT ACAGGGCAGA TAACTGGGAA CTGAGAAATG ATCTTACAGC AAGGGGAAGT ATTCATAATA TAGACAGAAA CATAGACTGG CCGTCTCCGA ACAGCAGATC TGAAATGAAC GGTACATATG AAACTTACAG TCTTACAAGT GATAACAGAC TCGGAAAAGA GTTCGGAGTA GGAAAAAATG CTTCTGTAAC ACCTTATGGA GGTATTAGGG CAATGTATGT GGTAAGACCG ACTTTTGAAG AGGAAGGTTT GGAAAGATTA AAAGTCGAGG GTAATGATGC ATGGAGTGTA AAACCAAGAG CCGGAGTAGA GCTTAAAGCT TCGGTTCCGA TTGGGAAAAA CAGTGCATGG AAAGTAAAAG GAACTTTGGA TCTTGCTTAT GAGTATGAGC TTGCTAATCT GAACGAGAGA GAAAGAGCTC AGCTTGTAGC AGCGGAAGAC GGTTATCATG ATCTTGCAAA GCCGGAGGAA GAAAAAGGAC AGTTTAAAAC AAGGGCAGCA ATAGGGGTAG AAGTAGAAGA AAGATACGGA GTCTTTTTGA CAGGCGAATA TGTAGCAGGT GAAAAGAGTC AGGAAGAGTA TAGAGCTGGA GTAACATTAA AGGCTGTATT CTAA
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Protein sequence | MKNKNFLMFF LAVNAFAVSQ GAAESIKRPE KYEKLYNGMV QNIEAGKSNV KNYEVLEKIL EKRNKELKDL YEQSDYIVKP EYLEWQIFFS GFYSHRESGD NTLANGTYHS DPSNVNGKFY TALGEAKQVD LGLYIPERTI KRSPVELKLV SPPEINLSSL DVNPEVNPSV SPDAASGTYK EYTPVGSMKS FLEAYENVFK SETNSQLKDD GVTELINSGD PSSSYKINYN VNTGLNITYD TVTDSFSENK LFTNGDSLVT WGTNSITTSY GNTANDPAFY GGGTRVAGVY GGTGNSITNS NQMDLKGPFT YGMVAEGGNS NTLINNSTGI ISDDKENDIT DTWYNNEIPH IGETITYTQE KTTSDPNIVI NDPYRTTTVS KHPDGNIIYV NGRPVYRHGG TATNPDVSST VTTIDSIDYT RTTSVTSYTG GYLGYKVGMF VNSNLNPINT IIQNDGKIKF NGYSSIGMYT SAGVRLSDVQ MLNTATIDIN TGNYTGYSNF GMKLDGVVNN DQTKKIISNT GTISISNGAG IAVVNGSVGE GFVENSGTIT VTNGTGVYLA PVSTSARLED AVNTASGIID VTSGAGMYAL GGRDEITRVI NNGEISVLGG MGMVASGKNA EAVNTSNDFK IKTSTGGFYA HNGGKVINSA DLTVNSSGVS LFNIDVNSEG SSVGNIIMDG TNSVAVYNKG KFTSTGDIDI AKSGSIAVYS TGTDNTNIKA DTIKLDGAKG AAFYTDGGKI NISPNTGTTT AVTVSGDSSY LFYDSSFKTG AVPNQTFVID GNFTANVKDG AIAFDFKNNS GNLIDYVKNS LLNIKSGTTT INIEGTAFHA KNSTISIDEV SQIKTTGGLA SGSVILKGSD VFYAEESTIN IDQDSDLDDS ADTYQKNQSH IANSNVNLLS GMTISGSKND QYGIGQEDYK NSGVTLTNAG DIILTGSGTT GIYGNNAKII NNGNITTGDS STGIFSSNNA EVTNTGNINF GNSGIGIYGI NTYGSKVPSS GSKVPSSFNK INITMSSGTI TADGTTEGYG IFANNSKGYG FSEVNFDGGL IDLSKISAAD KSKAVAVAVK DTDLSSSGNI NTAENGIAFY INGGNTSITG GTINLDKDNS IGLALQNIDT SSFTGTGAAF NIDGNGVILF HLKDSTGIKD DFTVNVASGS NYRYADMKNS SFTFDKSFSI EDNINLIVAD ASAVLLGTSS DISSAGTGNI GVYAKNKASA AVLSSLGVSD EITNKGKINL GDSSTGIYAE GGAGLLNETA GIINVGDNSQ GIYARNSGSA VNRGKISIGD SSIGIYFNNA SAAVNYGDIT SGSDNGVAVY MDDQTAGFRN DGLISLSGQN NIGIYDTGTG IRVIDNNGEI SVGDSASADS PNVGIYSVDG SLTINHNTNA KITAGINSMG IYAKNTKINA EGIINIGDNG TGIYADSGSN VYLGSNARLN LGAVNAAGVY ALDGSIVDNY TSNIIYPSDS YAFVLNSGAV LNNYAANTML DNGKVYAYSD NAVINNKGNF TLTGTDNIVL YGVNSSAVTN SGKIDAGVTQ GSNIGIYVKE SSAVNSGKII MGDSVIVDEY NPFVNKYSVA IYGENSDILN DTNGSVSVGE NSAGLYAVGG SIVNKGTVTS VKNGAIGIFI DNGTAENTGL IDLYGADSVG LAGKTGAVLT NSGTIRIHGD NSIGIFANLS SSVINKGTIE VLGNNSTGIH LQGNSVLLNE GTIVLGSNLS ESVKVSYSTG YDIPEIQNAG IIKVSEKFEV PADFQISIKP APSSFREPTA SEIFSDNYAL EDIDGRYLIS NAVSFVAPYF AATEPVVVLP DFSQHTNALA YKLEDVFVPT TPDGGPNSGK VRVKSKSITW DVIPDENADG NIDLWMVKIP YNVYTNGLWY DGFGKSLDAN YAGANAEGIE IFDKIDYIDN EKDLRHIMAS LGGSVYSNIN QREEDIAEVF ESSLDLLQSS HNNTKENVKI NVIAGKGNRK EKTDGVEEYD SAYTGVMALR EVERTYRHTF GYSAGYLHSG FEFKDGNESE EWVDTLQLGV HSKYRADNWE LRNDLTARGS IHNIDRNIDW PSPNSRSEMN GTYETYSLTS DNRLGKEFGV GKNASVTPYG GIRAMYVVRP TFEEEGLERL KVEGNDAWSV KPRAGVELKA SVPIGKNSAW KVKGTLDLAY EYELANLNER ERAQLVAAED GYHDLAKPEE EKGQFKTRAA IGVEVEERYG VFLTGEYVAG EKSQEEYRAG VTLKAVF
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