| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1721 |
|---|
| Symbol | |
|---|
| ID | 8597190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 1838647 |
|---|
| End bp | 1840227 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | PTS system, glucose-like IIB subunint |
|---|
| Protein accession | YP_003308510 |
|---|
| Protein GI | 269120333 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.587324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATAA AGGAAAAAAC TTTTAATCTG GGTCAGAAGC TTGGGAAGGC AATATTGCTG
CCAATAGCAA TACTTCCCGT GGCAGGGCTG CTGCTGGGTG TATCAGCAGC ATTATCAAAC
CCGGTTATAG TAAAAACATA TCCGGCATTA AATCATGTGG CGATACAGGC AGTATTCAAG
ATAATGAATG CCGCAGGAAA CGGAGTATTC TCGGCGTTAC CGTTAATATT TGCAGTGGGA
ATAGCAGTTG GTCTTGCTAA AGCTGATAAA GGAACAGCAG GTTTAGCTTC TGTAATAGGT
TATTTAATAA TGAATTGTAC TATAAATGCA TTATTGACTA TTACAGGAAA GATAGCCCCG
AAAGATATAG ATCCGAAATT GTTCGGTCAG GGAAATATAC TTGGTACGGT TACTTTACAG
ACCGGAATAT TCGGAGGAAT AGTTATCGGG TTAATGGTAG CATATCTTCA TAACAAATAC
TATCAGAAAA AGCTTCCAAC GTATCTTGCA TTTTTCGGCG GTTCAAGATT TGTACCTATA
GTAACATCGG TGGCAGCTCT TGCAGCCGGA GCAGTATTAT TCTTTATATG GCCTTTCTTC
GGTGCATTAT TCGCTTCAGC AGGTGTACTG GTAAATAAAA CAGGAATATT AGGTGCATTT
ATATACGGGT TTATACTGCG TTTATTACTG CCTCTGGGGC TTCATCATGT TTTTTATCTT
CCGTTTTGGA CAACAGCACT TGGAGGAACA CTTGAAGTAG GAGGAAAAAG TGTAGAAGGA
TTTCAGGCAA TATTTCTTGC ACAGCTTGGT GATCCTGATA CTGCTAAGTT TTTTGGAAAT
CTTGCAAAAT TTAACAGCGG AAGATATCTG CATATTATGA TAGGACTTCC TGCTGTATGT
CTTGCAATGT ATCGTGCAAT ACCTGATAAA AAAAGAAGAA TAGCAACAAT GGGATTTTTG
CTTTCAGCGG CATTGACATC TTTCATAACA GGAGTAACAG AGCCTATTGA TTTTGCCCTT
CTCTTTGCAT CGCCTGTTTT ATATCTTGTC AGCTGTGTAT ATTTTGCCTT ATGTTTTGTG
ATAACCACTG TAGCGGATAT TACCATAGGT TCCACTTTTT CGGCTGGAGT AATAGAATTT
CTGTTATTCG GAGTAATGCA GGGTAATGCA AAAACCGGAT ATCTATACCT TCTGTTAATA
GGAATACCTT TGTTTTTTGT ATACTATTTC TCATTCAAAT TTATGATTCA AAAATTTAAT
TATAAAACTC CGGGAAGAGG GGATGAGTCA GATGATGTAA TGATGGATGA CGGAAAAGGC
GGAAATGTTA CAGACGGTAA AAAAGAACAG GCAATTATAG ACGGACTTGG AGGTCTTGAG
AATATAGTGG ATCTTGATAA TTGTGCCACA AGACTTCGTG TAACATTAAA AGACGGAACT
AAAGTAAATG AACCGAAATT AAAGGGAACA GGCGCAGTAG GAATTATAAG CAAGGGAAAT
TCAATTCAGG TAGTCTACGG ACCAACTGTT AATATAATAA AAAATGATTT GGAAGCATAT
ATAAAAAGTA TTGAAATATG A
|
|---|
| Protein sequence | MGIKEKTFNL GQKLGKAILL PIAILPVAGL LLGVSAALSN PVIVKTYPAL NHVAIQAVFK
IMNAAGNGVF SALPLIFAVG IAVGLAKADK GTAGLASVIG YLIMNCTINA LLTITGKIAP
KDIDPKLFGQ GNILGTVTLQ TGIFGGIVIG LMVAYLHNKY YQKKLPTYLA FFGGSRFVPI
VTSVAALAAG AVLFFIWPFF GALFASAGVL VNKTGILGAF IYGFILRLLL PLGLHHVFYL
PFWTTALGGT LEVGGKSVEG FQAIFLAQLG DPDTAKFFGN LAKFNSGRYL HIMIGLPAVC
LAMYRAIPDK KRRIATMGFL LSAALTSFIT GVTEPIDFAL LFASPVLYLV SCVYFALCFV
ITTVADITIG STFSAGVIEF LLFGVMQGNA KTGYLYLLLI GIPLFFVYYF SFKFMIQKFN
YKTPGRGDES DDVMMDDGKG GNVTDGKKEQ AIIDGLGGLE NIVDLDNCAT RLRVTLKDGT
KVNEPKLKGT GAVGIISKGN SIQVVYGPTV NIIKNDLEAY IKSIEI
|
|---|
| |