Gene Sterm_1720 details

Gene Information

• Locus tag: Sterm_1720
• ID: 8597189
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1831356
• End bp: 1838285
• Gene Length: 6930 bp
• Protein Length: 2309 aa
• Translation table: 11
• GC content: 38%
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_003308509
• Protein GI: 269120332

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.92642
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCAA ATAAAAAATT ATTAGTATCA TTTTTAGCAT TGAATGCAGT ATTATCAGTA 
AATGCCAGCG GAGCAGAAAA AGCAGCATCA TCTAAATATG ACAGAATGTA TAACAGTATG 
GTAAAGAATC TTGAACAGGG AAAATCTAAC CAGAAAAACT ATGAAATAAT AGAACGAATA 
CTTAATCAAA AAAATAAAGA ATTAAAAGAT TTATATCTAC AGGGAGAATA TGTTGTAAAA 
CCTGAATATC TGGAATGGCA GGTATTTTTC TCAGGATTTT ATGATGAATA CGGTAAGGGT 
GTAGATAATA CTTCAGAAAA TGCGGCCTAT CATACTAAGG TAAGCGGATA TTATGACGAT 
AATGGTAATT ATGTAACGAC AAGCAGCAGT ATAAACGGAA TGGCGGGGAA ACCTTATCAG 
CCATTACAGC AGCCGAAAGA CATTAATCTG GGAGTGAGTA TTCCTTTGAA GGGAATGAGC 
AGGGAACCGC TTACATTATC ATTATCTCCG GCAAGTGAAA TAAGTATAAA TCCGAGCACT 
CTTACAGTAA CTGCACCGAC AGGGGTATCG ATACCGTCTC TAAGTTTTCT GGAATTCCAG 
CCGCTGGAAC CGATAGTAGA GTTACCACAG CTTGTACCGA TTCCGATAAT AACAATCGGT 
GGAGCAGGAG GCGGTAACGG CGGATACACA GGATTTTATC CAAACAGTGA TCCAGATGGT 
AATGCTATCA TATCGCAGAT GGATGTTCTT ACAGGTGAGA TTTATGCACA TATAGCTAGT 
CATTCGGGTA CAGGCGGATA CGGCTCAAAA GTAATTTATG ACAATTATGC GCTTACTAAT 
TTAACAGGAG GGCCGTCAGC AGGACTGACT ATATCAGCCG GTGGACAGGC ATTACCTGCC 
GGAGTATATA ATTCTACTAC AAATACAAGT GTTCAGGGAA TATTTAAAGT CGTGGATAAT 
ACATTAACAA GATATGGAGT AGTAGGAAGC AATCCTGACG ATCTGTCAAT AACTCTGGAA 
GGGGATGACC CAAACCCGGT ATTTTTAGGA CAAATACTTC ACTATGACGA ACATTATTAT 
GGGACACAAT ATAGACTTGA CGGACTTGAA GCACAGGGCT GGATAACAGC AGCAGAAAAA 
GCAGAGCTTG CAGATAAGTT TCTTGATCCG GTGCTGGGTC ATACAACTGC AAACAGATAT 
TTCCAATATG TAGAAAATAA CAGTACATGG AATCTGAAAG GATCCAGCAT AGTAGCTGTG 
AATCTGCAGG CACACAGCGG TGGTCAGGCT GCAAACAGTA TATTTATGAA CAGGGGAAAA 
ATAATAGGTC TGAATGAAGC AAGTACAAAT AATAATCTGG TAGGAAATCA GGTTGCCTTT 
ATGTTTACTG AGGGAACAAG CAGTCAGAAA CAGGAAGGGT TTGATAATAC AGGCTTAATA 
GAAATGAGAG CTCCGGGAAA TGTCATCTAT TTAATGACAA GCAGTGCGTC TTCTTCGGGT 
AATGGAAAAC ATATTCTTAT GAATAACGGG GACATGAAGC TTTACGGCAG ACAAAATGTA 
GGGGTATATA CAAGATCTGG AACAACAAAT CTTACAAGAA CAGAAATAAA ATTATATAAT 
CCGATAACAG TTCTGGGTGA TGAAAGTATT GGTGTAGATA TAGAAAGAGT ATTAAACTTC 
GCCAATTCAA AAATAAAAGT AGATGTGGGA ACAGAGGATC CTAAACAAAC AGTAACAAGT 
ATGTCGGGAG TAAACGGACT TGAAAACAGC GGTCATATAG CAAGTACAGG ATATAGCGAT 
CAGCATACTG ATAATGCAAT TGGAATGTAT ATTAATTTGG CATCAACATT TACTCTGGAT 
GACTATGAAA TAAAACTGGG AGAATACTCT CAGAAAGGCA TAGGAGTGAG AATTGAAAAC 
GGTCATCTGA CTCTGGGAAG TAATATGCTG GATACAACAA CAAAACACTC GCTGATAAGT 
GACGGCGGGA TAGGGAATAT ATTAATTGCA GGAATCGGTT CTTCTTCATC TGTAACAACT 
GATGCAAATA CTATATTAGA AGTAAAAAAT GGTAAGTCAC AGGTAGGAGT GTATGCTAAT 
ACAGGTTCAA GTGTTATTAA TGCAGGGACA TTAAATGCAA GCGGAGAAGG AACAAAAGGA 
ATAGTCGTAG ATACTGCAAG TACAATAACA AATTCCGGAG TAATTAATGT GTCAGGAGGA 
GTATATACTG ATTCTTCAAA TAATAAATCA GGATCTGTGG GAGTAGCAGT AAAAGATGCA 
GGTTCGACAT TTACATCAGC AGGAGTGGGA AGCAATGTAA CAGTAGATGT ATCTGGTAAA 
GAATCTACAG GGCTGTTTGC TGATACAGGA GTAATTGATA TTACAAACGG AACAATAAAA 
ACTTCTGACG GTGCATTTAA TTTATACGCC AAAGGAAGTA CAGGAAAAAT AAAGCTGACA 
AATGTAAATA TGGAAACAGG TCAGAGATCA CTGCTTTTCT ATAATGAAAA CGGAGGAACT 
TTTGAGCTGA ATAATGTAAA TGCCACAATA AAAGGTGCTG CGAATGCAAA TGACAGAGGA 
ACGGCTTTTT ACTATGTAGG AACAGGTGTT CTGCCAACAT TGACAACTGC AGATTTATCA 
GCATATTTTG CAAGCGTATT TAATAATACG GCAAATAATT TAACATTAAA TATGGAGACA 
GGATCAAGAT TATTTATAGT AGATAATGTG TCAATAGATC TGAGTGTAAC AGCAACACCT 
CTAGGTTCTA TAGCAGGAGG ACCGACGGTA ACAGGAAGTT CTGATTATAA AACATATATG 
ATGTATAAAA GTCTGCTTGG CATAGATCAG AATATCGCTC TTGATACAGC CACAGATGCA 
TATAATAATC TGGAAATAGT AACATCAAGT ATATATAATA ACGGATACAA CATAACTGGA 
AGTCTTACAA ATCAAGTAGC AATGGGACAG GAAAACGGAC TGGATACTCT CGGGGTTTCA 
TTGCCGAGAA GTACAGTATC ACTGACTAAT GACGGAGGAA ATATAACATT ATCGGGAGCT 
TCTTCTGTGG GAATGTACGC GAATTACGGG GAATTAAGAA ATATGAATTC CGGAGTAATT 
AATGTAAGCG GGGCAGGATC TATAGGAATG TACGGGGCAA ATGGTACTCT GGCAGATAAT 
CAGACAGGAT CTGTTATTAA TATTTCCAGT TCAGGAGTAG GAATATATGC AGAAGGTAAT 
AAACAAGGAA TAGCACAGAC TTTCGGAAAC GGGAAAATAG ATATAGTAAA CAGTGGATTA 
ATACAGGCAG GGGCATCATC TAATGCAATG GGAATATATG CAAATAATAA CAGTACGGGA 
ATAGCGGCAG ATGCACACGT AAATCTTTCA AACGGTACGA TAGATCTGGG AGCTTCTGAA 
AATGCAGTTG GTGTTTTTGT AGATAAAGGA ACTGTAACAG ATTCAGGCTC TACAATAACA 
GTAGGTAAAA ACGGAGTGGC TCTTTATGCT AAAGACAGTG TTGTAACTTT GGCAGGAACT 
ACAATAAATC TGTTCGGTGA TAACTCATTA GGACTTTATC TTGACGGAAC AACAAGCTTT 
ACTGGAAGCG GAAATATAAA TATAAACGGA CAGAATGTTG TGTTGTTTAA TATGAATTCA 
AGCGGAGCAA TCAGTAATTC ATTTAATGTA GTAAGTGTTG CACCGGGTTC TACATATACA 
TTAGGAAATA TAACAGGAGG AGTATTTGAA TACACAGGAA GCAGTAATCT TGCTTCAAAC 
GGAACTCTTG TATCCGGAAC AGGGTCAGCA ATATATTTAA ACGGTTCTGC AATAACAGCA 
TCTCCCGGCT CTACAAATGT AGCAGGTGTT GTATTAGACG GACCATATAC CGGGTTTAGT 
CCGCTGCCCG CAGGAATGAC TTCGGGAACG GACGGTGAAA ATGCAGGGAT TATTACTTTG 
GGAGATAGTT CTGTCGGTAT ATACGGTAAA AATGGTTCAA GAATAAGTAA TACAAATACA 
ATAACAGTAG ATAATGCTTC AGCAGGATTA ATGACTTCCG GAGCAGGAGC TTTTGCTCAG 
AATAGCGGAA CAATAACAGT AGGAACAGGT TCTCAGGGTA TCTATCTGAA AGACGGGGAT 
TATGCTCAGA ATACAGGGAA TATATTAAGT GCCGGAGCCG GAACAGTAGG TATTTATGCA 
AATAATGCAT CGGTGCATGT AACTAATGGC GGAAATATTG ATCTGTCAGG AGATAAATCA 
ATAGGTATTT ATTCTATAGG TACAATTCCG CAAAATATAA ATAATACAGG AGCATTAAAA 
ATAGGAGATT CTGTAAATAC ATCAGATCCA AGTATAGGAA TATACGGTGC AGTGGCAGGA 
AGCACAATAA CAAACAGCGG AACAGTCACA TCAGGAGTAA GATCAATAGG TATGTACAGT 
AACGGAGGAA CTGTTAATAA TATTGGTGCT TCAAACATAG GTAACTCAGG AGTGGGGATA 
TATTCTACCG GGGGAGTTGT TAATCTAAAT TCAGGTTCTG CATTTAATAT GGGAACAAAC 
GGAGCAGTGG GAGTATACGG AGTATATTCT GCTGTAAATA ACTCTGCTGA TCTTAATATA 
GGAAACAGCA ACTATGGATA CATTCTAAAA GGCGGATCAC TGACAAATGC GGCAGGAACA 
AACAGCAGTA TTGGTGATGA TTCGGTATAT ATGTATAGTA CTGAAGGAAC AACGGTAACT 
AATGACGGAA CTCTGATAAT GTCAGGAGCA AATAATGTAG GCTTCTATAT GGCACAGGAT 
CCGACAAGCA AAGTTGGCGG AGCTGTTATG ATTAATAATG CCGGAGGTAA TATTTCTGGA 
ACTGTAGGAA ATAACAATGT CGGAATATAT AACTATGGTG GTATTGTAGA TAACTACGGC 
GATGTGGCAG TGGGTAATTC AGATATTAAA TTTATAACAG GGACTACAAA TGTAGATGTT 
AAAGCTAGTA AGTATTCAGT CGGGATCTAC GGAGAGAATG CCGCGATTAT AAACCGTGCG 
GGAGCTAATG TATCAGCAGG CTACGGCGGA TATGGAATAG TAGCAAAAGG CGGAACTGCA 
AGCAACTTTG GAACAGTAAC AACTACAGGT GATTATTCTA CAGGTATGTA TACAGAAAAC 
GGAGTAATAA CAAATGAAGC AGGCGGAACT ATAAATGTTT CAGGTAATAA TACAATAGGA 
ATGGCAGGAA AAGGAATAGG TTCGCACATA ATAAACCATG GAACAATTAA TATAACAGGT 
AATGACGCAA TAGGTATGTA TGGTAATCTT GGAACAGTAA TAACAAATAC AGGGACAATC 
GATATATCGG GACAGAACAG CCAGATATTC GTATCATCAG ATCCAGATGA TCCCGGACAT 
ACAGTAGGAG CAGGAACGGC AACTATAAAC GGAGGAACAG CAGCAAATGT GATAAGCTCG 
ATTGGAAATA TTCATGCTCT GCCGGCATTG ATAAATGCAG GAATTATAAA ATCAAACGGA 
GTACTGGCAT TAGATGGTGT ACAGGTAATG GTAAAGCCTG ATCCTACGAC AGCGCAGCCG 
TCATCAGATC CTAATTTTGA TTTTTCATTA TCGGGAACTT CGATAATAGC GGATGAAGTA 
TTGACATCAA AGCCGATAGT AATACTTCCG GGATTCTCTG ACGGAACAAT AGCAGATGTA 
TATAAACTGG AAGGATTAAT AAAGGCATCA TCAGGACAGT ATGACTTTGT AAGCGGATCA 
TTGTTATGGG AAGCAACACC AAGAGCAACA GGAACAGGTG CAGATATATA TATGTCAAGA 
AAAGCATTTA CGGAATTTAC AGACGGTTTA TGGTATGAAG ACTTTGGTAC TGCATTGGAA 
AATAACTTCT TGGGTGCGAC AGGCGACGGA GTGAAAATAT ATAATAAAAC AGCATATATT 
CCTGATGAAC AAAATTTCAG ACATATAATG GGAAGTCTTG CAGGAAATGT GTATGCTAAT 
ATAAACCAGA GAGAAGACGA TATAGCCAAA ACATTTGAAA ATTCATTGCA TTTATTACAG 
GATTCAACAA ACAATACAAA AGAAAATGTA AAAATAAATG TAATAGCAGG AAAAGGAAAG 
AACAAAGAAG AAACAGACGG AGTAACAGGG TATGACTACA CAACAACAGG AGTACTTGCA 
TTAAGAGAAG TAGAAAGAAC ATATAAGCAT ACATTTGGTT ATTCATTAGG ATATTTACAT 
ACAGGATTTG AATTTAATGA CGGGAACAGC AGCGAAGAAT GGGTGGATAC TGTACAGCTT 
GGATTACATA ACAAGTATAA AACAAACGGA TGGACATTAA GAAATGATCT GACAGGAAGG 
GTAAGTATTC ATAACGTGGA CAGAAATATA GACTGGCCGT CACCGCTTGG CAGATCAGAA 
ATGAACGGAA CATACGAAAC ATACAGTATA ACAAGTGACA ATATACTAGG GAAAGAATTT 
GGACTAGGAA AGAAAGCAAG TATAATGCCG TATGGAGCAT TTAGAGCTAT GTATGTGACA 
AGACCGGATT TCAGTGAGAG CGGACTGGAA AAGCTTGAGG TGGAAGGAAA TGATGCATGG 
AGTGCTAAGC CGAGAGCCGG GGTAGAGCTG AAAGGAGCGC TGCCGTTAGG AGCTAATACA 
GCATGGCAAT TAAAGGGTAC GCTTGATTTT GCTTATGAAT ATGAGCTTGC AGACCTTAAT 
GAAAGAGAAA AAGCAAGACT GATAGCAATA GAAGACGGGT ATCATAAACT TTCAAAACCG 
CAGGATGAAA AAGGAACATT CAGAACAAGA GCAGCAATAG GCGTAGAGAT AGAAGACAGA 
TACGGAATAT TCCTAACAGG AGAGTACTCA ACAGGAAATG ATAAGGAAAA TGATTACAGA 
GCAGGAGTAA CTTTAAAAGC AGTATTTTAA 

 

Protein sequence

MKANKKLLVS FLALNAVLSV NASGAEKAAS SKYDRMYNSM VKNLEQGKSN QKNYEIIERI 
LNQKNKELKD LYLQGEYVVK PEYLEWQVFF SGFYDEYGKG VDNTSENAAY HTKVSGYYDD 
NGNYVTTSSS INGMAGKPYQ PLQQPKDINL GVSIPLKGMS REPLTLSLSP ASEISINPST 
LTVTAPTGVS IPSLSFLEFQ PLEPIVELPQ LVPIPIITIG GAGGGNGGYT GFYPNSDPDG 
NAIISQMDVL TGEIYAHIAS HSGTGGYGSK VIYDNYALTN LTGGPSAGLT ISAGGQALPA 
GVYNSTTNTS VQGIFKVVDN TLTRYGVVGS NPDDLSITLE GDDPNPVFLG QILHYDEHYY 
GTQYRLDGLE AQGWITAAEK AELADKFLDP VLGHTTANRY FQYVENNSTW NLKGSSIVAV 
NLQAHSGGQA ANSIFMNRGK IIGLNEASTN NNLVGNQVAF MFTEGTSSQK QEGFDNTGLI 
EMRAPGNVIY LMTSSASSSG NGKHILMNNG DMKLYGRQNV GVYTRSGTTN LTRTEIKLYN 
PITVLGDESI GVDIERVLNF ANSKIKVDVG TEDPKQTVTS MSGVNGLENS GHIASTGYSD 
QHTDNAIGMY INLASTFTLD DYEIKLGEYS QKGIGVRIEN GHLTLGSNML DTTTKHSLIS 
DGGIGNILIA GIGSSSSVTT DANTILEVKN GKSQVGVYAN TGSSVINAGT LNASGEGTKG 
IVVDTASTIT NSGVINVSGG VYTDSSNNKS GSVGVAVKDA GSTFTSAGVG SNVTVDVSGK 
ESTGLFADTG VIDITNGTIK TSDGAFNLYA KGSTGKIKLT NVNMETGQRS LLFYNENGGT 
FELNNVNATI KGAANANDRG TAFYYVGTGV LPTLTTADLS AYFASVFNNT ANNLTLNMET 
GSRLFIVDNV SIDLSVTATP LGSIAGGPTV TGSSDYKTYM MYKSLLGIDQ NIALDTATDA 
YNNLEIVTSS IYNNGYNITG SLTNQVAMGQ ENGLDTLGVS LPRSTVSLTN DGGNITLSGA 
SSVGMYANYG ELRNMNSGVI NVSGAGSIGM YGANGTLADN QTGSVINISS SGVGIYAEGN 
KQGIAQTFGN GKIDIVNSGL IQAGASSNAM GIYANNNSTG IAADAHVNLS NGTIDLGASE 
NAVGVFVDKG TVTDSGSTIT VGKNGVALYA KDSVVTLAGT TINLFGDNSL GLYLDGTTSF 
TGSGNINING QNVVLFNMNS SGAISNSFNV VSVAPGSTYT LGNITGGVFE YTGSSNLASN 
GTLVSGTGSA IYLNGSAITA SPGSTNVAGV VLDGPYTGFS PLPAGMTSGT DGENAGIITL 
GDSSVGIYGK NGSRISNTNT ITVDNASAGL MTSGAGAFAQ NSGTITVGTG SQGIYLKDGD 
YAQNTGNILS AGAGTVGIYA NNASVHVTNG GNIDLSGDKS IGIYSIGTIP QNINNTGALK 
IGDSVNTSDP SIGIYGAVAG STITNSGTVT SGVRSIGMYS NGGTVNNIGA SNIGNSGVGI 
YSTGGVVNLN SGSAFNMGTN GAVGVYGVYS AVNNSADLNI GNSNYGYILK GGSLTNAAGT 
NSSIGDDSVY MYSTEGTTVT NDGTLIMSGA NNVGFYMAQD PTSKVGGAVM INNAGGNISG 
TVGNNNVGIY NYGGIVDNYG DVAVGNSDIK FITGTTNVDV KASKYSVGIY GENAAIINRA 
GANVSAGYGG YGIVAKGGTA SNFGTVTTTG DYSTGMYTEN GVITNEAGGT INVSGNNTIG 
MAGKGIGSHI INHGTINITG NDAIGMYGNL GTVITNTGTI DISGQNSQIF VSSDPDDPGH 
TVGAGTATIN GGTAANVISS IGNIHALPAL INAGIIKSNG VLALDGVQVM VKPDPTTAQP 
SSDPNFDFSL SGTSIIADEV LTSKPIVILP GFSDGTIADV YKLEGLIKAS SGQYDFVSGS 
LLWEATPRAT GTGADIYMSR KAFTEFTDGL WYEDFGTALE NNFLGATGDG VKIYNKTAYI 
PDEQNFRHIM GSLAGNVYAN INQREDDIAK TFENSLHLLQ DSTNNTKENV KINVIAGKGK 
NKEETDGVTG YDYTTTGVLA LREVERTYKH TFGYSLGYLH TGFEFNDGNS SEEWVDTVQL 
GLHNKYKTNG WTLRNDLTGR VSIHNVDRNI DWPSPLGRSE MNGTYETYSI TSDNILGKEF 
GLGKKASIMP YGAFRAMYVT RPDFSESGLE KLEVEGNDAW SAKPRAGVEL KGALPLGANT 
AWQLKGTLDF AYEYELADLN EREKARLIAI EDGYHKLSKP QDEKGTFRTR AAIGVEIEDR 
YGIFLTGEYS TGNDKENDYR AGVTLKAVF