Gene Sterm_1718 details

Gene Information

• Locus tag: Sterm_1718
• ID: 8597187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1829263
• End bp: 1829970
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 34%
• Product: glycoside hydrolase family 25
• Protein accession: YP_003308507
• Protein GI: 269120330

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA TTTTTTTACT GGTTCCTTTG ATAGTCATTT TTGGTATTTA CAGTGCTTTT 
GAGAATGGCT GGCTCAGATT AAACTATCTG GGGAAAAAAG AATTTCCTGT GAGAGGAATA 
GATATTTCCC ATCATCAGAA AAAAATTAAC TGGGAAGAAC TGAGAAAGGC TGAGATCAAT 
TTTGTAATAA TCAAAGCTAC TGAAGGTGCA GATTATCAGG ATCCCAATTT CAAGGAAAAC 
TGGAATGAAT CATTGAAAGA GGGATATGAA ACCGGTGCAT ACCATTTTTA CAGATTGTGT 
AAAAGCGGGA ATGAACAGGC CGAAAATTTT ATTAATACAG TCCCAAAATC GGAAACTGCT 
CTTCCGCCGT TTATAGATCT GGAATATGGA GGAAACTGCA AGACTGATAA AAGCAGGGAT 
GAAGTAAAAA AAGAAATATA TATTTTTCTG GAAACTGTAA AAGATCATTA CGGGAAATCC 
CCTGTGCTCT ATGCGACAGA TTCTTTTTAC AAAGATTATA TAGAAAATGA TTATCAGGAA 
TATGACATAT GGATAAGAAA TATTATATCA AAGCCAAAAC TGGAAAATAA CAGAAAATGG 
ACATTCTGGC AGTATGCGAA CAGAGGCCGT TTAAAGGGAA TAGAAGGTTT TGTTGATCTA 
AATATTTTTC ATGGCTCTGA AGAAGAATAC AGAAAATTTA TAAAGTAA 

 

Protein sequence

MKKIFLLVPL IVIFGIYSAF ENGWLRLNYL GKKEFPVRGI DISHHQKKIN WEELRKAEIN 
FVIIKATEGA DYQDPNFKEN WNESLKEGYE TGAYHFYRLC KSGNEQAENF INTVPKSETA 
LPPFIDLEYG GNCKTDKSRD EVKKEIYIFL ETVKDHYGKS PVLYATDSFY KDYIENDYQE 
YDIWIRNIIS KPKLENNRKW TFWQYANRGR LKGIEGFVDL NIFHGSEEEY RKFIK