Gene Sterm_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1629 
Symbol 
ID8597098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1733226 
End bp1735877 
Gene Length2652 bp 
Protein Length883 aa 
Translation table11 
GC content38% 
IMG OID 
Productvalyl-tRNA synthetase 
Protein accessionYP_003308418 
Protein GI269120241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAT TGAGTAAAAG CTATTCACCT AAGGAAATAG AAGAAAAATG GTATAAGGTA 
TGGGAAGAAA ATGGATATTT CAGTGCCCAG CATAATGATG AAAAGCCGGG ATATTCAATA
GTAATACCGC CGCCAAATGT AACAGGGATT CTTCATATGG GGCATATACT GAATAATTCA
ATACAGGATA CAATGATAAG ATGGAAGAGA ATGTCCGGAT TCGATGCTTT GTGGATGCCG
GGAACAGATC ATGCCGGAAT AGCAACACAA AATAAAGTGG AAAAATGGCT TATGGAAGAG
GGTACTACAA AAGAAGAAAT AGGAAGAGAA AAGTTTCTGG AAAGAACATG GGAATGGAAA
GAAAAGCACG GAGGAATAAT AACAAAGCAG CTGAGAAGGC TTGGCTCGTC ACTTGACTGG
AAAAGAGAAA GATTTACCAT GGATGAGGGT CTTTCTGATG CTGTAAAGGA TGTTTTCATA
AGATTATATA ATGATGATCT GATATATAAA GGCGAATATA TAGTTAACTG GTGTCCGAAA
GATAAAACGG CGCTTGCTGA CGATGAGATA GAGCATGAAG AGGTAACAGG AAAAATATGG
CAGATAAAAT ATCCTGTAAA AGACAGTGAT GAATCTCTCA CTATTGCTAC TACAAGACCT
GAAACTATGC TGGGGGATAC AGGAGTTGCC GTAAATCCAA ATGACAGCAG ATATAAGCAC
CTGATTGGCA AAAGTGTGAT ACTTCCTCTT ATGAACAGAG AGATACCAAT AGTAGCAGAT
GAATATGTAG ATATGGAATT CGGAACAGGT GCGGTAAAAA TGACTCCGTC ACATGATCCG
AATGACTTTG AAGTAGCTAA AAGAACTAAT CTTCCTTTGC TGAATGTAAT GGAGGAAGAC
GGAAGCATAA ATGAAAACGG CGGAAAATAC AAAGGGCTGG ACAGATTTGT TGCCAGAAGA
GAGGTTCTTA AGGATCTGGA AGAGCTGGGA CTTCTTGTGG AAGTAAAAGA ACACCATCAC
TCAGTAGGAC ATTGTTACAG ATGCGGTACT GTTATAGAGC CCAGAGTTTC TAACCAGTGG
TTCGTAAGAA TGCAGCCTCT CGCCAAAAAA GCACTTGAGG TGGTAAGAAA CGGAGAAATA
ACAATATCAC CGCAGAGATG GATAAAAGTA TATTATAACT GGCTTGAAAA TATAAGAGAC
TGGTGTATCT CAAGACAGCT TTGGTGGGGG CACAGAATTC CCGCGTATTA TTCCGAGGAC
GGGACTATAT TTGTAGCAAA ATCACTTGAA GAAGCAAAAC AGCAGGCTAA GGAAAAATAT
GGAAAAGAAG TGGAGCTTAG AGAGGAAACA GATGTACTTG ATACATGGTT TTCATCACAG
CTGTGGCCTT TTTCCACTAT GGGCTGGCCT GAAAAAACAA AAGATTTTGA GAAGTTTTTC
CCTACAGATG CACTGGTAAC AGCTGCAGAT ATTATATTTT TCTGGGTATC AAGAATGATA
ATGATAAGTG AATACTTATT TGATGAAATC CCGTTTAAAT ATGTATACTT AAACGGAATA
GTAAGGGATG AAAAAGGTAG AAAAATGAGT AAAACTTTGG GGAATTCGCC TGATCCGCTT
GATCTTATAG ACAAATACGG GGCAGATGCG ATAAGATTCA GCCTTCTGTA TAATACTTCA
CAGGGGCAGG ATATCTTCTT CTCTGAAAAG CTTCTGGAAA TGGGAGCAAA TTTTTCTAAT
AAAGTATGGA ATGCATCAAA ATTTGTTCTT CAGAATCTGG AGGATTTTGA TTATAAAACA
TCAATATCAG ATCTTGAATT TAAACTGGAA GACAGATGGA TACTGTCAAA ATTACAGAAT
GCAGCAAAAG GTGTAAATAA TGCACTTGAT GGATATGAGC TTGATATGGC TGCAAAAACA
GCCTATGAAT TTTTCAGGGG TGAATTCTGT GACTGGTATG TGGAAGCTGC AAAAACAAGA
GTATACGGCG GAGATGAACA GGATAAGAAA ACTGCACAGT GGGTGCTTAG ACATATACTT
GATAACGGAT TAAAGCTGCT TCATCCTTTT ATGCCGTTTA TAACAGAGGA ATTATGGCAG
AAAGTAAAAC TTGACGGTGA AACAATAATG CTTTCAGATT TTCCTAAGTA TGACGAAGCT
CTTCTGGATA AGGAAGCAGA AGAGGAATTC GACTATCTGA AGGAAGTAAT TACAGCTATC
AGAAATATCA GAGGTGAGGT AAATGTACCG CCTTCAAAGA AAATAGAAGT TATATTTAAA
ACAAATAATG AGAGTGAAAG AAATGTTCTT GAGAAAAATG CAAAAATACT TGATAAGCTC
TCTAATGTAG AAAAATATAC TATAGACAAT GAAAGAAAAA TACCAAAACT CACAGGATTC
AGACTTGCAG ATAATACTGA GATATTTGTA CCGCTTGCAG GTCTCATAGA TACTGAAAAA
GAAACTGCAA AACTGAAAAA GGATATAGAA AAGACAGAAA CGGAATTAAA AAGAGTCCTT
GGCAAACTTT CCAATGAAAA ATTCCTCAGC AAAGCACCTC AGGATGTAGT GGATAAGGAA
AATGGAATCA AGGAAGAGCT GGAAAATAAG CTTGCCAAGC TTAGGGAAAA TCTGGAGTTA
TATAAAGACT AG
 
Protein sequence
MSELSKSYSP KEIEEKWYKV WEENGYFSAQ HNDEKPGYSI VIPPPNVTGI LHMGHILNNS 
IQDTMIRWKR MSGFDALWMP GTDHAGIATQ NKVEKWLMEE GTTKEEIGRE KFLERTWEWK
EKHGGIITKQ LRRLGSSLDW KRERFTMDEG LSDAVKDVFI RLYNDDLIYK GEYIVNWCPK
DKTALADDEI EHEEVTGKIW QIKYPVKDSD ESLTIATTRP ETMLGDTGVA VNPNDSRYKH
LIGKSVILPL MNREIPIVAD EYVDMEFGTG AVKMTPSHDP NDFEVAKRTN LPLLNVMEED
GSINENGGKY KGLDRFVARR EVLKDLEELG LLVEVKEHHH SVGHCYRCGT VIEPRVSNQW
FVRMQPLAKK ALEVVRNGEI TISPQRWIKV YYNWLENIRD WCISRQLWWG HRIPAYYSED
GTIFVAKSLE EAKQQAKEKY GKEVELREET DVLDTWFSSQ LWPFSTMGWP EKTKDFEKFF
PTDALVTAAD IIFFWVSRMI MISEYLFDEI PFKYVYLNGI VRDEKGRKMS KTLGNSPDPL
DLIDKYGADA IRFSLLYNTS QGQDIFFSEK LLEMGANFSN KVWNASKFVL QNLEDFDYKT
SISDLEFKLE DRWILSKLQN AAKGVNNALD GYELDMAAKT AYEFFRGEFC DWYVEAAKTR
VYGGDEQDKK TAQWVLRHIL DNGLKLLHPF MPFITEELWQ KVKLDGETIM LSDFPKYDEA
LLDKEAEEEF DYLKEVITAI RNIRGEVNVP PSKKIEVIFK TNNESERNVL EKNAKILDKL
SNVEKYTIDN ERKIPKLTGF RLADNTEIFV PLAGLIDTEK ETAKLKKDIE KTETELKRVL
GKLSNEKFLS KAPQDVVDKE NGIKEELENK LAKLRENLEL YKD