| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1601 |
|---|
| Symbol | |
|---|
| ID | 8597071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 1705689 |
|---|
| End bp | 1708316 |
|---|
| Gene Length | 2628 bp |
|---|
| Protein Length | 875 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | calcium-translocating P-type ATPase, PMCA-type |
|---|
| Protein accession | YP_003308391 |
|---|
| Protein GI | 269120214 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTA ATTTTAACGG GCTTAATGAA GAAGAGGTAA CCAGAAGCCG CGAACTGAAC
GGAAATAACG AAATCATCGA ACAAAAATCT GAAACATTTT TGAAAAAATT CCTTGGAAAT
TTTAATGACC CAATGATTAA GATACTTAGT GTCTGCTGCA TCTTATTATT GGTTCTCTCA
CTTTTTGGAA TTATCAAAAT GATCGAACCT GTAAGTATCG CGATGGCAAT ATTTGTCGCC
ACTATTGTTT CCACGCTTAA TGAATATTCT TCGGGCAAAA AATTCAGATC ATTACAGGAA
GAAGCAAATA AAATTCTGGT AAAAGTGTAT AGAAATAATA ATGTCAAGGA GATTCTTATT
GATGAAATCG TAGTCGGAGA CTATGTACTG CTGAATTCCG GAGATAAAAT CCCCGCAGAC
GGTATTGTGG TTTACGGACA TTTTAAAGTC GATAACTCGG TTCTAAACGG TGAATCTGAC
GAAAATCCCA AACAGCCTGT TACTGACGAT ACTGTGCTTG ACGATAAAAT AGACTTTACT
CACCCCAATA AAACTTACAG AGGCGCTGTA GTAAGCCATG GTGAGGGTGT AATAAAAATT
GAAAAAGTCG GTATGCAGAC TGTCAACGGT ATTATGATGC AGAACATGAA TATTGAGGAT
ACTCCATCTC CTTTGCAGAT AAAGCTTTCA GATCTTGCAG CAAAAATTTC AAAAATCGGA
TATATGGGTG CAATACTTAT TGGTATACTG AATTTTCTTT ATACTTCACT TCATCTGAAT
GATCCGTCAG TATTTTTTAC AGCTGCCAAT TCTCTTGAAA TAGCAAAAAC TGCTCTTAAT
TCACTGATTT ATGCAGTAAT TATTATAGTT ATGGCAGTAC CTGAGGGACT TCCTCTTATG
ATCGCCATAG TTCTTTCGCA GAATATGCAG AAAATGCTTA AGGACAACGT CTTGGTGAGA
AAACTCGTAG GTATAGAAAC AGCAGGTTCA TTAAATATCC TGTTTTCAGA TAAAACCGGA
ACAATCACAA AAGGACGTCT TGAGGTTATC CTTTTTCAAA ACGGAAGCTT TGATTCATAT
AAAGAGTATG CAGAAATACC TGATGAGCTG AGAAAGCTTG TAAATACTGC TATTTCCAAA
AATACTTCCT CAATGATAGC TGAAAACGGA GCTATTATCG GAGGAAACAG CACTGAAAGA
TCTATACTGG GATTTATTGA CAGAAATGAA ATTGATGATA ATATTGAAGT AAAAACCAAA
CAGGTTTTTA ACAGTACTAA TAAATACTCT GCCTCAGAAC TCGACAGTAA TCTCAACCTT
ACTTTCTATA AAGGGGCACC GGAAAGACTT CTTGAAAAAT GCACTACATA TTATGATAAT
GATGGAAATA AACAGGCTTT TACAAAAAAA CCGGATATTA CAAAAGTAAT TGACGACCTC
GCTAAAAAGT CAATCAGGGT TCTTGCCCTT ACTGTAAGTG ATAAAAAGCT TACCGAAGAT
GTTGTCCCGG AAGAAATGAC TTTTCTCGGA ATTCTGGGAA TAAGGGATGA TATCAGACCG
GAGGCTGTAA AAGCCATTGA AGAAGTTATG ACAGCAGGAA TTCAGGTTAT TATGATAACC
GGGGACAGAA AAGAAACAGC TATGGCAATA GCCAAAGACA GCGGGCTTCT TACCTCTGAC
AAAGAGGTTG TTCTTACTTC AGATGAGCTT CAGACAATGT CTGATGAAGA AATCAAAAAA
GTACTTCCTG ATGTAAGGGT AATAGCAAGA GCACTTCCAA TGGATAAATT CCGCCTTGTG
GGACTGGCTC AGGAGCTGGG ACTTGTAGCA GGAATGACAG GAGACGGTGT TAACGATGCA
CCTGCACTGA AAAGATCCGA TATCGGATTT GCAATGGGAA GCGGTACCGA AATAGCAAAA
GAAGTCGGGG ATATTATAAT TCTTGATGAT AATTTTCAAT CTATTGAAAA AGCAGTATTA
TATGGAAGAA CCATTTATAA CAATATAAAA AAATTCCTGA AATTTCAGCT GAACATTAAT
ATTTCAGCTG TGCTGATATC AGTTATTGCA CCATTTACAG GAGTTCAGAA TCCGCTTACG
ATTCTTCAGA TTTTATGGAT CAATATGATT ATGGATACTC TGGCAGCTTT AGCTCTCGGA
GGAGAACCAG CACTTTCCGA GTATATGAAA GAACGTCCGA AAAGCAGATC AGAAAAAATT
GTTTCTAAAA GTATGAGTAC GGCTATTTTC TGGACAGGTA TCTGGACCAC TATTATCAGT
ATATTGTTTT TAAAACTGGA TATATTCAGG AATTTGTTCG CTGATGAAAT TCATCATCTA
ACAGCTTACT TTTGTTTATT TGTATTCAGC GGACTTTTTA ACGGATTTAA TGTAAGAAGT
GACAAAATCA ATGTTTTCAG CAATCTCAGC CTAAATCCGA ATTTTCTGAA GGTATTTGCC
CTGATTTTTA TTATCCAAAT TGTTTTAGTA TATATAGGCG GGGAAATATT CAGGACTGTT
CCGCTTTCAG TTTCTGAATG GCTTGTTATT TTTGGATTAT CAGTTCTTAT AATCCCTGTG
GATATGATAA GAAAACTTAT CTTTCCTGCA AAAACCTACA ATAAATAA
|
|---|
| Protein sequence | MDFNFNGLNE EEVTRSRELN GNNEIIEQKS ETFLKKFLGN FNDPMIKILS VCCILLLVLS
LFGIIKMIEP VSIAMAIFVA TIVSTLNEYS SGKKFRSLQE EANKILVKVY RNNNVKEILI
DEIVVGDYVL LNSGDKIPAD GIVVYGHFKV DNSVLNGESD ENPKQPVTDD TVLDDKIDFT
HPNKTYRGAV VSHGEGVIKI EKVGMQTVNG IMMQNMNIED TPSPLQIKLS DLAAKISKIG
YMGAILIGIL NFLYTSLHLN DPSVFFTAAN SLEIAKTALN SLIYAVIIIV MAVPEGLPLM
IAIVLSQNMQ KMLKDNVLVR KLVGIETAGS LNILFSDKTG TITKGRLEVI LFQNGSFDSY
KEYAEIPDEL RKLVNTAISK NTSSMIAENG AIIGGNSTER SILGFIDRNE IDDNIEVKTK
QVFNSTNKYS ASELDSNLNL TFYKGAPERL LEKCTTYYDN DGNKQAFTKK PDITKVIDDL
AKKSIRVLAL TVSDKKLTED VVPEEMTFLG ILGIRDDIRP EAVKAIEEVM TAGIQVIMIT
GDRKETAMAI AKDSGLLTSD KEVVLTSDEL QTMSDEEIKK VLPDVRVIAR ALPMDKFRLV
GLAQELGLVA GMTGDGVNDA PALKRSDIGF AMGSGTEIAK EVGDIIILDD NFQSIEKAVL
YGRTIYNNIK KFLKFQLNIN ISAVLISVIA PFTGVQNPLT ILQILWINMI MDTLAALALG
GEPALSEYMK ERPKSRSEKI VSKSMSTAIF WTGIWTTIIS ILFLKLDIFR NLFADEIHHL
TAYFCLFVFS GLFNGFNVRS DKINVFSNLS LNPNFLKVFA LIFIIQIVLV YIGGEIFRTV
PLSVSEWLVI FGLSVLIIPV DMIRKLIFPA KTYNK
|
|---|
| |