Gene Sterm_1593 details

Gene Information

• Locus tag: Sterm_1593
• ID: 8597063
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1698961
• End bp: 1699689
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 29%
• Product: CRISPR-associated protein Cas6
• Protein accession: YP_003308383
• Protein GI: 269120206

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.24413
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGATTAT CATTACATTG TGAATTGAAA GAAAATGAAA TACCATTGGA TTACCGGAGA 
AAAATAGTGT CAATGTTCAA AAGATGTTTA ACAAACTACG ATAAAGATGT TTACAACAAG 
TATTACCATA TGAGAGATCC CATACAGAAA GAATTTACAT TCTCTAATTA CTTTCAAAAA 
CCTATTATGA AAAAAGAAAC AATAGAAATA CCGAACAAAA GAATCATCAT TAATTTTTCC 
ACTTCAGACA ATGTGATAGG AATTGATTTT TATAATGCAT TTGTCAAAAA TCTGTATCAA 
GAAATAAGAT TTTCAAATTT AAATAGTATA AAAATAACAA GAATAGTCGT ACAAAAGGAA 
AGAAAAATAG TTTCAAATAA GGTGGTTTTC CGTACTCAGT CACCGCTCAT AGTTCGTGAC 
CATCATCCTG AAAGTGGTAA AGATTGGTAT TATTCTTGCA ATGATATGAA TTTTGAAAAA 
TTTCTGAAAA GAAATTTATA TAATCAGCTA AAGGATAAAT TTTCTGAAAA AATAGAAAAA 
GATTTGGAGA ATTTATCTAT TAGAAAGGTA GATATGAAAA AAATAATTGT AACCTCTTAC 
GGGATAAAAA TGGCTTCTTC CATAGGAAGT TTTGAAATGG AGGGAGAGCA GTACATTCTT 
AATGAAATTT ATCAGAGCGG CGCAGGCAGT AAGAAAAGTC TTGGATTTTC TATGGTAGAT 
ATTGTATAA 

 

Protein sequence

MRLSLHCELK ENEIPLDYRR KIVSMFKRCL TNYDKDVYNK YYHMRDPIQK EFTFSNYFQK 
PIMKKETIEI PNKRIIINFS TSDNVIGIDF YNAFVKNLYQ EIRFSNLNSI KITRIVVQKE 
RKIVSNKVVF RTQSPLIVRD HHPESGKDWY YSCNDMNFEK FLKRNLYNQL KDKFSEKIEK 
DLENLSIRKV DMKKIIVTSY GIKMASSIGS FEMEGEQYIL NEIYQSGAGS KKSLGFSMVD 
IV