| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1588 |
|---|
| Symbol | |
|---|
| ID | 8597058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 1687437 |
|---|
| End bp | 1688447 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | aspartate/ammonia ligase |
|---|
| Protein accession | YP_003308378 |
|---|
| Protein GI | 269120201 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0108517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA TAGTACCAAA AAATTATAAA ACGCCTTTAG ACATAAGGGA AACTGAAGTG
GCAATAAAAA AACTCAAGGA TAGATTTGAG GAAGAGCTTA GTGAAAAAAT GAATATAACA
AGAGTATCAG CCCCTTTATT CGTAATAAGA AATACAGGAT TAAACGATGA TCTGAACGGT
CAGGAGCATC CGGTGAGCTT TACGGCACCC AATATTACTG ATCTTAATGT AGAAATAGTA
CATTCTCTTG CAAAATGGAA AAGAATGGCT TTATACAGAT ATGGGTTTCA AAACGGCGAA
GGACTTTATA CTGATATGAA CGCAATCAGA CGTGAAGAAG AAACATCTAA TCTGCATTCT
ATCTATGTGG ATCAGTGGGA TTGGGAAAGA GTTATCGAAA AGGAAGACAG AACAGAGGAC
TTTCTTGAAG GAATCGTGAA AAAGCTGTTT GATGTATTTA AATCTATAGA AGCATTTACT
TTGGGAGAGT ATCCACAGCT TGGAGAAAAA TGGCTTCCTG AAAAAATAAC ATTTATAACT
ACACAGGAGC TGGAAAATAA ATATCCTGAT CTTACTCCGA AAGAAAGAGA AGGTGCTGCT
GCAAAAGAAT ACGGCGCAAT ATTTCTGAAA AAAATCGGAG GTGTACTGGA ATCAGGAGAA
AAGCATGACG GAAGGGCTCC GGACTATGAT GACTGGAATC TGAACGGGGA TATTATATTC
TGGAATCCGC TTTTGGACTG TGCTATAGAG CTTTCATCAA TGGGAATAAG AGTAGACAGC
GACTCTCTTG AAAAGCAGCT TCATATATCA AATGCGCTGG ACAGACTAAA TATGCAGTAT
CACCAAATGG TAAAATCAAA TACTCTGCCT CTTACCATTG GAGGAGGAAT CGGACAGTCA
AGAATATGTA TGTATTTTTT GAGAAAGGCT CATGTAGGAG AGGTTCAGGC ATCTATATGG
AGCGAGGAAA CAGAAAAAAT ATGTAAAGAA AACGGAATAA ATTTATTATA A
|
|---|
| Protein sequence | MKVIVPKNYK TPLDIRETEV AIKKLKDRFE EELSEKMNIT RVSAPLFVIR NTGLNDDLNG
QEHPVSFTAP NITDLNVEIV HSLAKWKRMA LYRYGFQNGE GLYTDMNAIR REEETSNLHS
IYVDQWDWER VIEKEDRTED FLEGIVKKLF DVFKSIEAFT LGEYPQLGEK WLPEKITFIT
TQELENKYPD LTPKEREGAA AKEYGAIFLK KIGGVLESGE KHDGRAPDYD DWNLNGDIIF
WNPLLDCAIE LSSMGIRVDS DSLEKQLHIS NALDRLNMQY HQMVKSNTLP LTIGGGIGQS
RICMYFLRKA HVGEVQASIW SEETEKICKE NGINLL
|
|---|
| |