Gene Sterm_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1545 
Symbol 
ID8597015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1642647 
End bp1644425 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content35% 
IMG OID 
ProductATP-dependent DNA helicase RecQ 
Protein accessionYP_003308335 
Protein GI269120158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG CAATTTCCAT TTTAAATAAA TATTTCGGAT ACGACTCTTT CAGAAGAGGT 
CAGGAAGAAA TAATAAATAC CGTAAATGAT AAAAAAGATG TACTTGCCGT TATGCCAACC
GGAGGTGGGA AGTCTATATG CTATCAGATT CCCGCTCTTA TGCTCGAGGG AATAACAATT
GTTATTTCTC CTTTGATATC ACTAATGAAG GATCAGGTAG ATACGTTAAA CGAACTCGAA
ATAAAAGCGG CATATATAAA CAGCAGTCTC AGTGATAATG AAATATTCTA TATACTTACC
GATGTGAAAA ATAAAAAAAC TAAAATACTT TATATTGCTC CAGAAAGATT AAACTCCATG
AGCTTTGTCA ATCTGATGAA AAATCTGGAT GTATCGATGA TAGCAATAGA TGAGGCACAT
TGTGTATCTC AGTGGGGGCA TGATTTTAGA AAAAGTTACC GTAATATTCC CGATTTTATA
AATATATTTC CCAAAAGACC TGTAGTAGCA TGTTTTACTG CAACTGCCAC AAAGGAAGTA
AGAGATGATA TTGTAAGTGT TCTGGAATTA AGGAATCCCA AAGTCTTTAT TACAGGGTTT
AACAGAGAGA ATCTGAAAAT CAAGGTTATT AAAGGCGAAG TGAAAAAAAA ATATATTCTG
GATTATGTAG GTAAAAACAG CGGACAATCC GGTATTGTTT ATTGTTCTAC ACGAAAGGAA
GTAGACAGCG TCTATGAACT TTTATTTGGG AAATTCCGTA CTGTTACAAG ATATCACGGC
GGTCTTAGTG ATGAAGAAAG AAAACGCAAT CAGGAAAATT TTATTTATGA TAAATCTAAT
ATTATAGTAG CAACTAACGC TTTTGGTATG GGAATAGACA AACCCAATGT AAGATACGTT
ATTCACTATA ATATGCCCCG TAATATTGAG AACTATTATC AGGAAATAGG ACGTGCGGGC
AGGGACGGAC TGAACAGCGA GTGTATAATG CTTTATTCGC CGAGAGATGT TCAGATTCAG
AAATTTTTAA TAGAAAACAG TACTGAATCA GAAGAAAGAA AAGCTCACGA ATATAAGAAA
CTAAGAACAA TTACTGATTT TATCCATACC GATAACTGTC TGAGAAATTA TATTCTGGAT
TATTTTGAGG AGAAATATGA AGGAGAATGC GGAACATGCA GTAATTGCAG CGGTAATTAC
GAGATGACCG ACAGAACTAT AGATGCACAG AAGGTGCTTT CGTGTGTTTA CAGAATGAAA
CGGCCATATG GAATAAACAT GATAGTAGAT GTATTAAAAG GATCAAAAAA TCAAAAGGTT
CTGGGATTTA AGCTAAACGA GCTTACTACA TACGGGATCA TGAAAGAATA TACAAAAGAG
GATCTGAAAA GCTTTGTAAA TACTTTGATT GCCCATAATT ATCTGGATTA TATCGACGGC
GAGTTTCCTG TGGTTACAGG CAATGAAAAA TCTGTCAGGG TATTAAAGTC ACAGGAAAAG
GTTCTGTTTA AAAATGTCAA GAAATCAGCA CCTGTATTTG AGCATAATGA ATTGTTTGAC
AGACTGAGAA ACTTGAGAAA GCAGATAGCT CAGGCGGAAA ATGTTCCGGG ATATATAGTT
TTCGGTGATA ACTCGCTGAA AGAGATGAGT GTAAAATATC CCCGTACATT TGAACAGTTT
CTTGAAATCA GCGGTGTAGG AGAAGCGAAG CTGAAAAAAT ACGGAATGGA ATTCTTGAGC
ATGATAAATG AATATGTAAT AGAAAAAGGA ATAGGATAA
 
Protein sequence
MNKAISILNK YFGYDSFRRG QEEIINTVND KKDVLAVMPT GGGKSICYQI PALMLEGITI 
VISPLISLMK DQVDTLNELE IKAAYINSSL SDNEIFYILT DVKNKKTKIL YIAPERLNSM
SFVNLMKNLD VSMIAIDEAH CVSQWGHDFR KSYRNIPDFI NIFPKRPVVA CFTATATKEV
RDDIVSVLEL RNPKVFITGF NRENLKIKVI KGEVKKKYIL DYVGKNSGQS GIVYCSTRKE
VDSVYELLFG KFRTVTRYHG GLSDEERKRN QENFIYDKSN IIVATNAFGM GIDKPNVRYV
IHYNMPRNIE NYYQEIGRAG RDGLNSECIM LYSPRDVQIQ KFLIENSTES EERKAHEYKK
LRTITDFIHT DNCLRNYILD YFEEKYEGEC GTCSNCSGNY EMTDRTIDAQ KVLSCVYRMK
RPYGINMIVD VLKGSKNQKV LGFKLNELTT YGIMKEYTKE DLKSFVNTLI AHNYLDYIDG
EFPVVTGNEK SVRVLKSQEK VLFKNVKKSA PVFEHNELFD RLRNLRKQIA QAENVPGYIV
FGDNSLKEMS VKYPRTFEQF LEISGVGEAK LKKYGMEFLS MINEYVIEKG IG