Gene Sterm_1542 details

Gene Information

• Locus tag: Sterm_1542
• ID: 8597012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 1640501
• End bp: 1641154
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 35%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003308332
• Protein GI: 269120155

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0591728
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTAG ATTTTATCTT TATGAAAGAA CAGATCCCGT TATTTGTAAA AGCTTCTATA 
CTGACTCTTC AGATAGCTTT ACTCGGAATA GCCGGCTCTG TTCTTTTAGG CATAGTAAAC 
AGTATCATAC TTTATTACAA AATAAAAATA CTTAATAAAG TTGTTGCTGT ATATGTAGAG 
GTTTCAAGAA ATACACCGCT GTTAATACAG ATTTTCTTTT TATATTTCGG TCTTCCGGCA 
CTCGGCATAA AATTAAGCAA CTATACCTGT GCTCTAACCG GAATAATTTT TCTCGGAGGA 
AGCTATATGA CAGAAGCTTT CAGAGCCGGG CTGGAATCCA TAGAAAAAGT CCAGATAGAA 
TCCGGACTCA GCATAGGGCT TTCCAGAAGA CAGCTTATGC GTTATGTAAT ATTTCCGCAG 
GCATTTCGTA TTGCACTGCC TGCCACAGGA GCAAACTTTA TTTTTCTCTT AAAAGAAACT 
TCGGTTGTTT CTGCAATTTC CGTGGCAGAG CTTTTATACA CTACAAACAG CCTTATTGCG 
ATATATTACA AAACTTATGA AATGCTGTTT TTACTTGTTA TTTCATACTT TATCCTTATA 
GGCCCTCTCT CTTTTATTTT ATATATCACA GAAAGAAGGA TGAAATATGA TTAA 

 

Protein sequence

MELDFIFMKE QIPLFVKASI LTLQIALLGI AGSVLLGIVN SIILYYKIKI LNKVVAVYVE 
VSRNTPLLIQ IFFLYFGLPA LGIKLSNYTC ALTGIIFLGG SYMTEAFRAG LESIEKVQIE 
SGLSIGLSRR QLMRYVIFPQ AFRIALPATG ANFIFLLKET SVVSAISVAE LLYTTNSLIA 
IYYKTYEMLF LLVISYFILI GPLSFILYIT ERRMKYD