Gene Sterm_1541 details

Gene Information

• Locus tag: Sterm_1541
• ID: 8597011
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 1639852
• End bp: 1640508
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 34%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003308331
• Protein GI: 269120154

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00385329
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAATT TAGATTACGG CAGTCTTGCT CAGATTTTTT CTGCTTTGCT CGAGGGATTA 
TGGGTTACTT TGAGAATTGC TTTGCTTTCG ATAATTTTTT CCGTTATTTT CGGAATCATT 
CTGGGAATTA TTATGAATTC AAAGAATATT CTTGTTCGTG TGATTACCAG AATATATCTT 
GAATTTTTCA GAATTATACC TGTTATTGTA TGGCTTTTTA TAGTATTTTT CTGGATCCCT 
ATGGGAACCG GCCTTAATAT TACAGGCGAA GGTGCCGCTG TTTTAGTATT TTCAATGTGG 
GGAAGTGCTG AAATGGGTGA TCTTGTAAGA GGAGCAATAG AGTCCCTTCC GAAGATACAG 
TCTGAATCGG CTAAATCCAT AGGATTGAAT AAAATACAGA TATACTATTA TGTTCTTATA 
CCGCAGGCCT TGAAAAGGGT TATTCCCTCT GCCATAAATC TGAGTACCAG AGTTATCAAA 
ACTACTTCCC TTGTTGTTCT TATAGGAGTA GTTGATGTGG TAAAAAAAGG ACAGCAGATA 
ATTGAAAGGA CAAAAAGTGC ATTCTTTATA TATGCTCTGT TATTCTTAAT ATATTTTATA 
ATTTGCTATC CATTGTCCTA TTATTCCAGA AAGCTGGAAA AATCACGAGA AAAATAA 

 

Protein sequence

MINLDYGSLA QIFSALLEGL WVTLRIALLS IIFSVIFGII LGIIMNSKNI LVRVITRIYL 
EFFRIIPVIV WLFIVFFWIP MGTGLNITGE GAAVLVFSMW GSAEMGDLVR GAIESLPKIQ 
SESAKSIGLN KIQIYYYVLI PQALKRVIPS AINLSTRVIK TTSLVVLIGV VDVVKKGQQI 
IERTKSAFFI YALLFLIYFI ICYPLSYYSR KLEKSREK