Gene Sterm_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1533 
Symbol 
ID8597003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1630407 
End bp1634162 
Gene Length3756 bp 
Protein Length1251 aa 
Translation table11 
GC content34% 
IMG OID 
Productouter membrane autotransporter barrel domain protein 
Protein accessionYP_003308323 
Protein GI269120146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA AACCAAAAAA ACTGATGAAT ACGATCTTTT TACTATTGGC AATAAATTCC 
GTTTCTATGG CCAAAGAGGT AAAAGAGGAA AACGAATTCA TTATCTTAGG GACAGAATAT
AAAATGTCTG ATAAAAATAA AAAGTTAAAG AAATTATCTA ATACAAACAA TGAAAAACCG
GAAAATTTGT CTGATGATAC TGAAGGCTCT GATGAACCGT CTGATGATTC TGCAGGTACT
AAGGACTCAG ATAGCGAAAC AGAAAAAATA ACTGTGATAA AAGAAAATGG CGTAGTTAAA
GCAGAAAAAA CAGCTTTTGG AAGTTCGCTG AGCTATGAAA CTACGGGAAA TATTCTGGGA
AATGACAATA CAGGGTTATG GGCGGCGGAT AATAATACAA GTGTAGCAAA TAAATATATT
ATAGAATCAT ATTATACAAA TAATGAGGCT AAGAATTTTT CAGCAGAAAT AGTAAAAAAT
GCAAATTTTA TAAATGAAGG AACAATAGGC GGGAACAGAG GCGGGGTGCT TCTCCAGTCC
GGTGCTGTAA TGTCAAATGA AGGAACAATT AATAATACAG GAGATTACGG GATATATCTG
GAAGATTCCG GAACTGTACT GAATAATTAT TCTGCTGGGA AAATAGAGAA TTATGGGAAT
TATGGAATTT TTCTTAATGA AGGAACTAAA GCAGAGAATA ACGGTCTTAT AGCAAACAGA
GGAAAATTCG GGATATACAT TAATAACGGC GAGGCTGTTA ACAGCGGAGT GATAGAGAAT
AATGATGATT TTGGTATATA TGCTCTAGGC AGTGAGTCTG TTATTGAAAA TAATGGGACA
GTAAAAAATA CCGGGAATTA CGGCTTGTAT GCTGGAAATG AAGCGAAAAC CGCAAATAAT
GCAGAAGGAA TAATAGAAAA TACCGGTGAT TATGGAATAT ACACAGAAGG TAACAAAAGT
ATAGCTGAAA ATTTCGGGAT TGTCAGTAAT GAAAAAGCAT ATGGAATGAT AGCAAAAAAC
GGCGGAACAA TTGTAAATAC AAAAAATGGA ATTGTAAACA ACGGAACTGA TTATGGAATG
TATGTTGATG GTACAGGAAG TACAGCTCAA AATAACGGTA AAATAAAAAA TGACGGTAAT
AGTGGAATAC ATGCAGTTTC AGGCAGTGAA GGAATAAACA GTGAAACCGG AATAATACAG
AACACTGGTA ATGTAGGAAT GTATTCAGAA TCAGGAAGCA AAACATTAAA TTATGGGAGA
ATAGAAAATA GCGGATTATA TGGTATGTTT ACAGCAGATA ACAGTCAAGG CTATAATTAT
GGAGAGATAA AAAATAATTC TAGTAATGGT GCATATGTGA CTGGTTCAGG TTCTGTTTTT
ATAAATGAAG AAACAGGAAT TATATCAAAT AATGGAAAAG ACGGTATACA TATAAGCTCT
TCTGCAGAAG GTATAAATAA AGGAATAATA GCTAATAATG GAACAGAGGG CATGTATGTG
GAAAGTCAGG GGCAGGGGAG AAATTTTGGA GAAATAAGAA ATACATCAGA TAATGGTGTA
TATATAAATG GAGCTGGTTC CAGATTTGTA AATGAAGAAA CAGGTGTTAT ATCAAATGCA
GGAACAGGAG GAATTTATGC GACTTTTGGA GGAACGGTAG AAAATAAAGG AGTTATATCA
AATAATGGAA AAACTGGAGT ATTTATAACC AATAACAGTC GTGGATATAA CTACGGAGAG
ATAAGCAATA CCTCAGGTTA TGGTGCATAT GTAATAGATG CAGGCTCTGT TTTTATAAAT
GAAGAGACTG GGATTATATC TAATGCCGGA TCAATAGGAA TTTATGTACT GGAAGGAGGA
AGAGCAGAAA ATAAAGGACT TATATCAAAT ACTGATACAG ATGGTATGTA TATAGCTAGT
GAAGGTCAGG GATATAATTA CGGTGAAATT AGGAATAGTT CAGATAATGG TGTATATATA
ACAGGAACAG GCTCGATTTT TGTGAATAAA GAAACAGGAA TAATAGCTAA TGAAGGTAAT
TACGGGATAT ATTCAAAAAT GCTTTATTCA GGTATTCAGC CGATAGTAAT AAATGACGGA
ACCATACACT TAACAGGTGA TAATAAAACA GGGGTATATA TAAATAATAC TAATTTTACA
AATAACGGGA TAATACGTAT AGATGGAGAG AATGCAACAG GAATAAAAGC AGAAAATAAC
AGTACAGTAA GAATAGGACA GAATTCACAG ATAATTCTTG ACGGGAACAG TCCTGTAACT
CAGACAAATA CTGATTATGA AGATACTGCG AGTATAGGGG CAAACAATAG CAATTCCGGC
GGCAGAGCCT ATGTTCTGGA TAGTACATCT ACATTAGTAA ATGCGGGAAC TATAACAAGT
TCTGGAAAAT TCACAGTAGA AAGTGAAGGA AAATTTGTGC TGGATACACA AACAGGAGAG
ATAGAGGCTT CTACACTGAA TTTAGAGGGA GATATGTATC TAAATGCTGA GGGAACTCTG
GATTCATCAG AAGACAGCTA TCTTTTGAAA AGTGTAAAAG TAAATGATGT AACAGGTACA
GGAAGTATAG TATCGGATTC ATATTTATTC ACGGCTTCTG CGGAAAAAGA CGGAGACAAT
TACAGCATGG TAATGAAAAG AAAAGATTTT AGCGATGTGT TTAGCGGAGA TTTGGGCGAA
GTGCTTGAAA ATAATTATTC AGGTTCTGAA AATAATAATG TTCAGAATGC TTTGTATAAT
TCATTAAAGA AAAATGTGAC TTCAGAAGCT TTAGCCAAAA CAGCACAGGA AGAAATAACA
GGTGAAAGTA TAACAGCAAA TTTGACATAT CAGCAGCTTC AGCAGAACAA AATACTCGAA
GATGGTATAT TTCAATTATT AGATAAAAAA TCAGATGTTA ATCAGGGATT TTATCTCAAT
TTTCTTGGCG GAAATACAAA GGCAGATACT AAAGAAAATG CCCTTGGTTA TGATGAAGAC
AGCTATGGCT TTACAGCCGG AATAATGAAA AAAGCCGGAG ATAAAACATC TGTCGGCGGA
TTTGTCGGCT ATCTTAATTC TGATGTAGAT TACAGAGATG ACAGTAAATC CAGCCAGACT
ACAGATACAT GGACAATAAA AGGAGCTGTA GAACAGATAA TAACAGATAA ACTGACATGG
ACAAGTACTC TTGGTTATAA TATCTCATCA ACTGACACAA GCAGAAAAAT AACTTATGAT
AATACAAACC GAGAAGTAAA TGGAGATTTT GATTCATGGT CTGTAAATGC TAAAACACAA
TTGAAATACA CTTATGATAT AACAGACAGA ATAAATTTAC GGCCAATGGC AGGGATAAGC
GTGGATTACT TATCACAGGA CGGCTATACA GAAAAAGGAA ACGGATACAG CATGGACGTA
AAAGCAGCAG ATGCTTTTTC AGTAAGACCT GAAATTGGAC TGGAATCAGA AATGACAGTA
TTTAATAATA ATACTTCAAG CTTTAAAGTA ATACCAAAAG TAAAATATTC TTATGAAGTG
GGAAATCCTT ATAAAGACAG AGATATAAAT CTTGCAGGAT TTAGTGATGC AGTATCTGTA
GATTCAAGAG AGACAGGAAG AAATGATCTG AATCTCGGTC TTGGAATAGA ATATGGATTT
AAAGATAAAA TAAAATTATA TGGAGAATAT AATAAAGGAA TAGCAGACGG TAATGATAAT
CAGGTCATAA GAGCAGGATT TAAAATAGCA TGGTAA
 
Protein sequence
MKEKPKKLMN TIFLLLAINS VSMAKEVKEE NEFIILGTEY KMSDKNKKLK KLSNTNNEKP 
ENLSDDTEGS DEPSDDSAGT KDSDSETEKI TVIKENGVVK AEKTAFGSSL SYETTGNILG
NDNTGLWAAD NNTSVANKYI IESYYTNNEA KNFSAEIVKN ANFINEGTIG GNRGGVLLQS
GAVMSNEGTI NNTGDYGIYL EDSGTVLNNY SAGKIENYGN YGIFLNEGTK AENNGLIANR
GKFGIYINNG EAVNSGVIEN NDDFGIYALG SESVIENNGT VKNTGNYGLY AGNEAKTANN
AEGIIENTGD YGIYTEGNKS IAENFGIVSN EKAYGMIAKN GGTIVNTKNG IVNNGTDYGM
YVDGTGSTAQ NNGKIKNDGN SGIHAVSGSE GINSETGIIQ NTGNVGMYSE SGSKTLNYGR
IENSGLYGMF TADNSQGYNY GEIKNNSSNG AYVTGSGSVF INEETGIISN NGKDGIHISS
SAEGINKGII ANNGTEGMYV ESQGQGRNFG EIRNTSDNGV YINGAGSRFV NEETGVISNA
GTGGIYATFG GTVENKGVIS NNGKTGVFIT NNSRGYNYGE ISNTSGYGAY VIDAGSVFIN
EETGIISNAG SIGIYVLEGG RAENKGLISN TDTDGMYIAS EGQGYNYGEI RNSSDNGVYI
TGTGSIFVNK ETGIIANEGN YGIYSKMLYS GIQPIVINDG TIHLTGDNKT GVYINNTNFT
NNGIIRIDGE NATGIKAENN STVRIGQNSQ IILDGNSPVT QTNTDYEDTA SIGANNSNSG
GRAYVLDSTS TLVNAGTITS SGKFTVESEG KFVLDTQTGE IEASTLNLEG DMYLNAEGTL
DSSEDSYLLK SVKVNDVTGT GSIVSDSYLF TASAEKDGDN YSMVMKRKDF SDVFSGDLGE
VLENNYSGSE NNNVQNALYN SLKKNVTSEA LAKTAQEEIT GESITANLTY QQLQQNKILE
DGIFQLLDKK SDVNQGFYLN FLGGNTKADT KENALGYDED SYGFTAGIMK KAGDKTSVGG
FVGYLNSDVD YRDDSKSSQT TDTWTIKGAV EQIITDKLTW TSTLGYNISS TDTSRKITYD
NTNREVNGDF DSWSVNAKTQ LKYTYDITDR INLRPMAGIS VDYLSQDGYT EKGNGYSMDV
KAADAFSVRP EIGLESEMTV FNNNTSSFKV IPKVKYSYEV GNPYKDRDIN LAGFSDAVSV
DSRETGRNDL NLGLGIEYGF KDKIKLYGEY NKGIADGNDN QVIRAGFKIA W