Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1533 |
Symbol | |
ID | 8597003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1630407 |
End bp | 1634162 |
Gene Length | 3756 bp |
Protein Length | 1251 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003308323 |
Protein GI | 269120146 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA AACCAAAAAA ACTGATGAAT ACGATCTTTT TACTATTGGC AATAAATTCC GTTTCTATGG CCAAAGAGGT AAAAGAGGAA AACGAATTCA TTATCTTAGG GACAGAATAT AAAATGTCTG ATAAAAATAA AAAGTTAAAG AAATTATCTA ATACAAACAA TGAAAAACCG GAAAATTTGT CTGATGATAC TGAAGGCTCT GATGAACCGT CTGATGATTC TGCAGGTACT AAGGACTCAG ATAGCGAAAC AGAAAAAATA ACTGTGATAA AAGAAAATGG CGTAGTTAAA GCAGAAAAAA CAGCTTTTGG AAGTTCGCTG AGCTATGAAA CTACGGGAAA TATTCTGGGA AATGACAATA CAGGGTTATG GGCGGCGGAT AATAATACAA GTGTAGCAAA TAAATATATT ATAGAATCAT ATTATACAAA TAATGAGGCT AAGAATTTTT CAGCAGAAAT AGTAAAAAAT GCAAATTTTA TAAATGAAGG AACAATAGGC GGGAACAGAG GCGGGGTGCT TCTCCAGTCC GGTGCTGTAA TGTCAAATGA AGGAACAATT AATAATACAG GAGATTACGG GATATATCTG GAAGATTCCG GAACTGTACT GAATAATTAT TCTGCTGGGA AAATAGAGAA TTATGGGAAT TATGGAATTT TTCTTAATGA AGGAACTAAA GCAGAGAATA ACGGTCTTAT AGCAAACAGA GGAAAATTCG GGATATACAT TAATAACGGC GAGGCTGTTA ACAGCGGAGT GATAGAGAAT AATGATGATT TTGGTATATA TGCTCTAGGC AGTGAGTCTG TTATTGAAAA TAATGGGACA GTAAAAAATA CCGGGAATTA CGGCTTGTAT GCTGGAAATG AAGCGAAAAC CGCAAATAAT GCAGAAGGAA TAATAGAAAA TACCGGTGAT TATGGAATAT ACACAGAAGG TAACAAAAGT ATAGCTGAAA ATTTCGGGAT TGTCAGTAAT GAAAAAGCAT ATGGAATGAT AGCAAAAAAC GGCGGAACAA TTGTAAATAC AAAAAATGGA ATTGTAAACA ACGGAACTGA TTATGGAATG TATGTTGATG GTACAGGAAG TACAGCTCAA AATAACGGTA AAATAAAAAA TGACGGTAAT AGTGGAATAC ATGCAGTTTC AGGCAGTGAA GGAATAAACA GTGAAACCGG AATAATACAG AACACTGGTA ATGTAGGAAT GTATTCAGAA TCAGGAAGCA AAACATTAAA TTATGGGAGA ATAGAAAATA GCGGATTATA TGGTATGTTT ACAGCAGATA ACAGTCAAGG CTATAATTAT GGAGAGATAA AAAATAATTC TAGTAATGGT GCATATGTGA CTGGTTCAGG TTCTGTTTTT ATAAATGAAG AAACAGGAAT TATATCAAAT AATGGAAAAG ACGGTATACA TATAAGCTCT TCTGCAGAAG GTATAAATAA AGGAATAATA GCTAATAATG GAACAGAGGG CATGTATGTG GAAAGTCAGG GGCAGGGGAG AAATTTTGGA GAAATAAGAA ATACATCAGA TAATGGTGTA TATATAAATG GAGCTGGTTC CAGATTTGTA AATGAAGAAA CAGGTGTTAT ATCAAATGCA GGAACAGGAG GAATTTATGC GACTTTTGGA GGAACGGTAG AAAATAAAGG AGTTATATCA AATAATGGAA AAACTGGAGT ATTTATAACC AATAACAGTC GTGGATATAA CTACGGAGAG ATAAGCAATA CCTCAGGTTA TGGTGCATAT GTAATAGATG CAGGCTCTGT TTTTATAAAT GAAGAGACTG GGATTATATC TAATGCCGGA TCAATAGGAA TTTATGTACT GGAAGGAGGA AGAGCAGAAA ATAAAGGACT TATATCAAAT ACTGATACAG ATGGTATGTA TATAGCTAGT GAAGGTCAGG GATATAATTA CGGTGAAATT AGGAATAGTT CAGATAATGG TGTATATATA ACAGGAACAG GCTCGATTTT TGTGAATAAA GAAACAGGAA TAATAGCTAA TGAAGGTAAT TACGGGATAT ATTCAAAAAT GCTTTATTCA GGTATTCAGC CGATAGTAAT AAATGACGGA ACCATACACT TAACAGGTGA TAATAAAACA GGGGTATATA TAAATAATAC TAATTTTACA AATAACGGGA TAATACGTAT AGATGGAGAG AATGCAACAG GAATAAAAGC AGAAAATAAC AGTACAGTAA GAATAGGACA GAATTCACAG ATAATTCTTG ACGGGAACAG TCCTGTAACT CAGACAAATA CTGATTATGA AGATACTGCG AGTATAGGGG CAAACAATAG CAATTCCGGC GGCAGAGCCT ATGTTCTGGA TAGTACATCT ACATTAGTAA ATGCGGGAAC TATAACAAGT TCTGGAAAAT TCACAGTAGA AAGTGAAGGA AAATTTGTGC TGGATACACA AACAGGAGAG ATAGAGGCTT CTACACTGAA TTTAGAGGGA GATATGTATC TAAATGCTGA GGGAACTCTG GATTCATCAG AAGACAGCTA TCTTTTGAAA AGTGTAAAAG TAAATGATGT AACAGGTACA GGAAGTATAG TATCGGATTC ATATTTATTC ACGGCTTCTG CGGAAAAAGA CGGAGACAAT TACAGCATGG TAATGAAAAG AAAAGATTTT AGCGATGTGT TTAGCGGAGA TTTGGGCGAA GTGCTTGAAA ATAATTATTC AGGTTCTGAA AATAATAATG TTCAGAATGC TTTGTATAAT TCATTAAAGA AAAATGTGAC TTCAGAAGCT TTAGCCAAAA CAGCACAGGA AGAAATAACA GGTGAAAGTA TAACAGCAAA TTTGACATAT CAGCAGCTTC AGCAGAACAA AATACTCGAA GATGGTATAT TTCAATTATT AGATAAAAAA TCAGATGTTA ATCAGGGATT TTATCTCAAT TTTCTTGGCG GAAATACAAA GGCAGATACT AAAGAAAATG CCCTTGGTTA TGATGAAGAC AGCTATGGCT TTACAGCCGG AATAATGAAA AAAGCCGGAG ATAAAACATC TGTCGGCGGA TTTGTCGGCT ATCTTAATTC TGATGTAGAT TACAGAGATG ACAGTAAATC CAGCCAGACT ACAGATACAT GGACAATAAA AGGAGCTGTA GAACAGATAA TAACAGATAA ACTGACATGG ACAAGTACTC TTGGTTATAA TATCTCATCA ACTGACACAA GCAGAAAAAT AACTTATGAT AATACAAACC GAGAAGTAAA TGGAGATTTT GATTCATGGT CTGTAAATGC TAAAACACAA TTGAAATACA CTTATGATAT AACAGACAGA ATAAATTTAC GGCCAATGGC AGGGATAAGC GTGGATTACT TATCACAGGA CGGCTATACA GAAAAAGGAA ACGGATACAG CATGGACGTA AAAGCAGCAG ATGCTTTTTC AGTAAGACCT GAAATTGGAC TGGAATCAGA AATGACAGTA TTTAATAATA ATACTTCAAG CTTTAAAGTA ATACCAAAAG TAAAATATTC TTATGAAGTG GGAAATCCTT ATAAAGACAG AGATATAAAT CTTGCAGGAT TTAGTGATGC AGTATCTGTA GATTCAAGAG AGACAGGAAG AAATGATCTG AATCTCGGTC TTGGAATAGA ATATGGATTT AAAGATAAAA TAAAATTATA TGGAGAATAT AATAAAGGAA TAGCAGACGG TAATGATAAT CAGGTCATAA GAGCAGGATT TAAAATAGCA TGGTAA
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Protein sequence | MKEKPKKLMN TIFLLLAINS VSMAKEVKEE NEFIILGTEY KMSDKNKKLK KLSNTNNEKP ENLSDDTEGS DEPSDDSAGT KDSDSETEKI TVIKENGVVK AEKTAFGSSL SYETTGNILG NDNTGLWAAD NNTSVANKYI IESYYTNNEA KNFSAEIVKN ANFINEGTIG GNRGGVLLQS GAVMSNEGTI NNTGDYGIYL EDSGTVLNNY SAGKIENYGN YGIFLNEGTK AENNGLIANR GKFGIYINNG EAVNSGVIEN NDDFGIYALG SESVIENNGT VKNTGNYGLY AGNEAKTANN AEGIIENTGD YGIYTEGNKS IAENFGIVSN EKAYGMIAKN GGTIVNTKNG IVNNGTDYGM YVDGTGSTAQ NNGKIKNDGN SGIHAVSGSE GINSETGIIQ NTGNVGMYSE SGSKTLNYGR IENSGLYGMF TADNSQGYNY GEIKNNSSNG AYVTGSGSVF INEETGIISN NGKDGIHISS SAEGINKGII ANNGTEGMYV ESQGQGRNFG EIRNTSDNGV YINGAGSRFV NEETGVISNA GTGGIYATFG GTVENKGVIS NNGKTGVFIT NNSRGYNYGE ISNTSGYGAY VIDAGSVFIN EETGIISNAG SIGIYVLEGG RAENKGLISN TDTDGMYIAS EGQGYNYGEI RNSSDNGVYI TGTGSIFVNK ETGIIANEGN YGIYSKMLYS GIQPIVINDG TIHLTGDNKT GVYINNTNFT NNGIIRIDGE NATGIKAENN STVRIGQNSQ IILDGNSPVT QTNTDYEDTA SIGANNSNSG GRAYVLDSTS TLVNAGTITS SGKFTVESEG KFVLDTQTGE IEASTLNLEG DMYLNAEGTL DSSEDSYLLK SVKVNDVTGT GSIVSDSYLF TASAEKDGDN YSMVMKRKDF SDVFSGDLGE VLENNYSGSE NNNVQNALYN SLKKNVTSEA LAKTAQEEIT GESITANLTY QQLQQNKILE DGIFQLLDKK SDVNQGFYLN FLGGNTKADT KENALGYDED SYGFTAGIMK KAGDKTSVGG FVGYLNSDVD YRDDSKSSQT TDTWTIKGAV EQIITDKLTW TSTLGYNISS TDTSRKITYD NTNREVNGDF DSWSVNAKTQ LKYTYDITDR INLRPMAGIS VDYLSQDGYT EKGNGYSMDV KAADAFSVRP EIGLESEMTV FNNNTSSFKV IPKVKYSYEV GNPYKDRDIN LAGFSDAVSV DSRETGRNDL NLGLGIEYGF KDKIKLYGEY NKGIADGNDN QVIRAGFKIA W
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