Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1519 |
Symbol | |
ID | 8596989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1609969 |
End bp | 1614363 |
Gene Length | 4395 bp |
Protein Length | 1464 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003308309 |
Protein GI | 269120132 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.796845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TAATATTAAT GTCAATACTC GGAACATTGT CTAGTCTTGG GAATGCACAG ATTACAGTTA ATACATCCTC TGATACTAAA AATATAACTA CTAATACACA AACAACAGAT GATATGATAA TTACCGGAGA AGGACCGTTC ACTGCCGGCG GGAACAACGG AAATCCCGAT CCTAACTGGT ATTTACAGGG ATATAAGGTA AATAACGGGG CAGTTCTTGA AAATGTAAAT AAAATTGATT TAAATGCAAA ATATGATAAC GGTGTTTTGA TTAGCAATAA TTCAGGTCTA GTTAATTCCG GAACAATCAG TCTGAACAGC ACTAATGGCG TAGGAGTTTT ATCGTCTGAC GGAACAGGAA ATATAGTAAA CTCTTCTAAT GGTGTTATAA AGTTAACAAC AGGAATAGGA ATCGCCACAA AAGGTTATTC CGGTCCCACA TTTACAGGGA CTATCAGAAA TGACGGTCAA ATATTGTCTA CAGCGGGAGG AACAGGAATA TTTACATATG GAAGTCAGTA TGTACCCGGC GGGACAGTGG AAAATAACGG AATAATAAGT GTGAGCGGAG GAACAAACGC TACAGGTGTT TCAATAAGGG GTTTCACCAC ATTTACCAAT AATGAAACAG TATCTGGTTC AGCTTCAGCC AGTTCGTCTT TTGGTGCTTT GGTTACAGGA GACAGCGGGG CTCAGCTTAT AAACTCGTCA ACCGGAGAGA TAATCGGGAA AAATTATGCC AACGGAATGT ATGCTGCCAA TAATTCTGCT ACTAATCAGA CATTTGCAAG AAATGACGGA ACTATAGTTG TAGATAAAGG TTATGGTATA TATGCAATTT CTTCAAAAGC AGAAAATAAC GGAACAATAT ATTCGAATAA TATAGGAATA TATGCAACTA AATATTCAGG GACATCCCCG GTTTCTGTTA TTTCAAATAA CGGAACTATA GTAATAGGAA ATAACGGGAT CGGAATGCAG CTAGGACAGG CAATAGGGAA AAATACCGGG GAAATAGTTA TTGCCGGAAA TAATGTAATA GGTGCATATA TATTCGGCGG AAGTAATTAT GAGGGAAGTC TTACAAATTA TCATGATATA AGCTCTGATG CAGATAAGAC AGGGGTTATT CTGATAAAAC TCAGCGGAAG TACAACAGCA GGAGATAAAA CAGCACATAT ATATAATAAT GCTTCATTAA CAGCATTAGG TGATAATTCG ATTGCTATCT ATTCTATAAG TAACGGTAAA ATTCATAATA CGGGAAATAT AACTGTAAAT AACGGAATTG GTATAAAATT GGAGAATTCT TCGTTGAATA ACGGTGATAA TACCGGTGTT ATTACAGTAA AAGGGAGCGG AATCGGAATT TTGGCGGGTG CTTCTAACTA TAACGGTTCC GTACTAAATA ACGACGGGAA GATAATACTT GAAAATAACG GGACAGGTAT TTATGTTTCT TCAGGAAACA CTTATATGAA TGGAACAACA GGAACAAATG CCGGAACAAT AGAGTTCAGC GGAGACGGCG GGACAGGTAT TTATGTAACA GATACTAAAT CATCATTTAC AAACAATGCA GATATCACAT CATCAGGGAA AAATACTACA GGTATGTCTG CTGTGAATTT TGCAAGCATA ACAAATACAG GTAATATGAA TCTTTCAGGA GAAGGCTCTG TAGGACTGAA TATAGCCGGC GACGGAAAGC TGCTGTCTAA TACGGGAAAT CTGACTGTAG ATAACGGAAT AGGAATAAAA GTAAGCAATT CTAAAATAGA AGCAGGACAA AATACGGGTG CTATCACTGT CAGCGGTGAA TCTGGCGCAG GAATAGCCGG TATAAACTCA AAAATTATCA ATAACGGTAA AATTTATGTG AATGATATGG CTCTTGGAAT ATACAGCAGT AATTCTGAAG TGACAAGTGC AGGAGAGATA GAGATAACAG AAGGTACAGG AATAGGAGCT GAAACTGGCA GTAAAATTAC AAATGAGGCT TCAATAGAAA TCTCGGGATC AGGTACAGGA ATAAAATCTG CCGGTTCTAT AATAGCAAAT AAAAATACAG GCGAAATATC TGTAGTTAAA GGAACTAATA TAGAAGCAAG TGATTCACTG GTAACAAATA ATGCAGTTTT GAGCAATAAA GACGGAACAG GAATACTTGG CAGAAATACA GAGATAATAA ATAATGGAAA TTTACAGATA GAAAAAGGTA CAGGTATTTC TGCATTGAGT AATAGTCTGT TGACAAATAG CGCAGAAATA AATGTAACAA CAGAAGGAGC AGGAATAAAA GCTTCAAATT CAGAGATAAA TAATAATAGT AACGGAACAA TAACTGTCAC AAAAGGAGTT AATATTGATT TATCAGAATC AGTTTTGGAA AATGCTGCGT TATTAAGTAA TTCAGATGGT ATAGGAATAA AAGCTGATAA TTCAACAGTG AAGAATACAG GAAATATAGA TATAACAAAC GGAACAGCCA TAGAAGCTTT GAATAACAGC AGTATTTTGA ATACAGCTTA TTTGAAGAGC GGCAATACCG GAATAAATAC TTCGAATTCA ATACTATTAA ATGAAGGAAA AATCGATGCA GCAGAAACTG GAATTTATGC ATCGGATAAC ATAAAAACTG TAAATACAGG AGAAATAAAA GGTAAAACTG GTGTAGAAAT AATTTCCGGG ACAGAAGAAT ACAGCGGCCA CTTTTTGAAT ACAGGAAAGA TCACAGGTAC AGATTATGCC GTGAAATTTG ATAATAATAA TAGTGTATTT GAACTGGGGA GCGGAAGTAT CATAAACGGA AAAATTGATG CCTCAGGCGG AGAAAATGTA TTAATAGTAA ATGGAACTGT AAATATAGAC AGTGCTGATA ATTTTAATAA AATAGTAAGC AGAGGGGATT CTGTTATTTC CGGAATCGTT AATTTGAATC CTGCTGCAGA TGACAGTTAT TATACAGAAG CTTTTTCTGC GAAAAAGAGT ATGGCGGATA TGGCATCTGA AACAGAGCTG GGAGAATTAA CAGTATCAGG AGTGGTAAAT GTAGGCGTAA ATTATGACGG CATAGTTGAT GAAACAGATA AAACAGGAAA AATTATAGCA GCAAGTCTAA ATTTACAAAA CGGAAAAATA GTTTTGAATA ATGCAGGAAG TACGGTAAAT GATATTGCTA AAGAATCAGG ACTGACTAAT TACGGAGACC AGATCAGAGT AAAAAGTATA GTAGTATCAA ATAAACAACA GGCAGTAGAC CCGTCTTTCC AATTTCAGTC AACTGGCGGA ATGAATGAAG CAGAAGGGTG GACAAGAGAA ACAGTAGCAA GGATAGAAAA CGGCGTTACA GTATTAGATG CATTATATAC TAATCTTAAT AAAGAAGTTC CTGTAACACC TACACCAGAA CCTGCACCAG AACCGACACC GGATCCCGCA CCTGTACCAA ATCCCAAACC CACAGCGGCT GAAAAAACAA ATGCGGTTCC CAGAAACAGG ATTGATCTTG ATAATCTAAA CAGACTGGAC AGTATATCGG GAAGTTTTCT TTCAATGGAA GCAGACAGTA TGAATGCCGG TGAAAGAAGA CAGTCAGTGG AATATACGGG AACAAAAGCA GGATCAAATT TCAAGGCAAG CAACAGCCTT AATTATGACT ATGATGCTGA TTCTGACGGA ATAGCAGGAA CAACTCTTTA TAAACATACA GACAGCTTAT ACAGCGGATT TACTTTAGGA TATTCAGATA ATAAGGTAAA TTATGATAAC GGAGATGATG AAAAAATAAG TTCGGCAGGA ATAAATATAT TTGGAAGATA TAAAACAGGG AACTGGAATT TTGACGGGCA TTTTGGATAC AGCTATAATG AACATGAGCT GAATGCAGAC TGGCTTATGG CAGGAAGAAA AGAGAGCAAT TATAATTCAC ATGTAATAAA AACAGGAGTA TCGGCAAGCT ATGACCAGAA TCTGGGAAAT ACAGGACTGG TATTGACTCC GTCAATAGGT GCAGATTATA TAATGGTGAA TGAGGAAACA ATAAGAACAG ACGGAATGGC AAATATAGAA GGTGCACACG GGAACGGTGC AGCAGGGAAA ATAGGACTTC ATCTCGGCAA TACTGCCGGA AATTTCAGAT GGTTAGCCGG AATAGGGTAT GAACAGAATT TTACAGATAC TTTTCACAAA GAGAGAAAAA TGCTGAATAA TTATACAATG GAAGAACTGC ATTATGGAAA AGGAACTTTC AATGCTAATT TAAATATGGA TTTTAAAGTA ACTGATAAAT TTACTCTGAA AACAGGCTAT GAATACGAAA ATAACAGTAA TTATGAAAAT CATAAAATTA ATGCAGGTAT TTCGTTTATA CTTGGTGAAA AATAA
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Protein sequence | MKKIILMSIL GTLSSLGNAQ ITVNTSSDTK NITTNTQTTD DMIITGEGPF TAGGNNGNPD PNWYLQGYKV NNGAVLENVN KIDLNAKYDN GVLISNNSGL VNSGTISLNS TNGVGVLSSD GTGNIVNSSN GVIKLTTGIG IATKGYSGPT FTGTIRNDGQ ILSTAGGTGI FTYGSQYVPG GTVENNGIIS VSGGTNATGV SIRGFTTFTN NETVSGSASA SSSFGALVTG DSGAQLINSS TGEIIGKNYA NGMYAANNSA TNQTFARNDG TIVVDKGYGI YAISSKAENN GTIYSNNIGI YATKYSGTSP VSVISNNGTI VIGNNGIGMQ LGQAIGKNTG EIVIAGNNVI GAYIFGGSNY EGSLTNYHDI SSDADKTGVI LIKLSGSTTA GDKTAHIYNN ASLTALGDNS IAIYSISNGK IHNTGNITVN NGIGIKLENS SLNNGDNTGV ITVKGSGIGI LAGASNYNGS VLNNDGKIIL ENNGTGIYVS SGNTYMNGTT GTNAGTIEFS GDGGTGIYVT DTKSSFTNNA DITSSGKNTT GMSAVNFASI TNTGNMNLSG EGSVGLNIAG DGKLLSNTGN LTVDNGIGIK VSNSKIEAGQ NTGAITVSGE SGAGIAGINS KIINNGKIYV NDMALGIYSS NSEVTSAGEI EITEGTGIGA ETGSKITNEA SIEISGSGTG IKSAGSIIAN KNTGEISVVK GTNIEASDSL VTNNAVLSNK DGTGILGRNT EIINNGNLQI EKGTGISALS NSLLTNSAEI NVTTEGAGIK ASNSEINNNS NGTITVTKGV NIDLSESVLE NAALLSNSDG IGIKADNSTV KNTGNIDITN GTAIEALNNS SILNTAYLKS GNTGINTSNS ILLNEGKIDA AETGIYASDN IKTVNTGEIK GKTGVEIISG TEEYSGHFLN TGKITGTDYA VKFDNNNSVF ELGSGSIING KIDASGGENV LIVNGTVNID SADNFNKIVS RGDSVISGIV NLNPAADDSY YTEAFSAKKS MADMASETEL GELTVSGVVN VGVNYDGIVD ETDKTGKIIA ASLNLQNGKI VLNNAGSTVN DIAKESGLTN YGDQIRVKSI VVSNKQQAVD PSFQFQSTGG MNEAEGWTRE TVARIENGVT VLDALYTNLN KEVPVTPTPE PAPEPTPDPA PVPNPKPTAA EKTNAVPRNR IDLDNLNRLD SISGSFLSME ADSMNAGERR QSVEYTGTKA GSNFKASNSL NYDYDADSDG IAGTTLYKHT DSLYSGFTLG YSDNKVNYDN GDDEKISSAG INIFGRYKTG NWNFDGHFGY SYNEHELNAD WLMAGRKESN YNSHVIKTGV SASYDQNLGN TGLVLTPSIG ADYIMVNEET IRTDGMANIE GAHGNGAAGK IGLHLGNTAG NFRWLAGIGY EQNFTDTFHK ERKMLNNYTM EELHYGKGTF NANLNMDFKV TDKFTLKTGY EYENNSNYEN HKINAGISFI LGEK
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