Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1479 |
Symbol | |
ID | 8596952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 1566521 |
End bp | 1568290 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003308272 |
Protein GI | 269120095 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAG AAAATGTAGT TATTGCAGAA AATTTATATA AACGTTTTAT TGCCAAGCCA TCCAAAAAAA CGATAAATGC TCTCACAAAT ATAAATATTA AAATTCCGGC AGGAAAGCTT ACTGCATTAA TCGGACCAGA CGGAGCAGGC AAAAGTACAT TTATGCGTCT AATATGCGGT CTTATGACTC CCAGCGAGGG AAATCTCACA GTTCTTGGAA TAAATACAAA AGACAATCCT CAGGAAATTC AAAACAGAAT CAGTTATATG TCACAGCGCT TCGGGCTTTA TGAAGATTTA AGCATTCAGG AAAATCTTGA TCTTTATGCT GACTTGCACG GAGTATCAAA AAAAGAACGC AGAGAACGTT TTGACGAACT TTTGAAAATG ACAGGTCTGG AAGCTTTTAC CAAAAGACAG GCAGGAAAGC TTTCCGGCGG AATGAAACAG AAGCTCAGCT TAGCCTGCAC ATTAGTCCGT TCTCCCGAGC TTTTGCTGCT GGATGAACCA ACAGTAGGAG TCGACCCTCT TTCGAGAAGA GAACTGTGGG AAATTCTTCA AAAGCTTGTG CAAAAGGAAA AACTTACAGT TCTTGTGAGT ACAGCTTATA TGGATGAAGC TGAGCTTTGC CAAAAAACTA TAGTGATGCA TAAAAGCAAA GTATTAGATG TGGGAACTCC GGAAGGACTG CGAAGAAAAG CTGCAGATAA ATGCTTTAAA ATTCAGCCGC CTAAAAGCAT GCCTTCCAGA TTAATACAGA CAAAATTACT TGATGATAAA GAAAATATTA TTGATGCTGT TCCTGAGGGC GGAGCCGTGA GATTTATCAT TCGCTCAAAA AAAGCTTTTG ATAATATAAA AAAAATTGAC GGCAATTTAG AAATCCAGAA GGTAGATTCC AGATTGGAGG ACGGATTCAT GACCTTGTTA AGTGAATATG AAAATGAACA TAATGATGAT GATGATAATA TCAAAGAGAA ATTCCATATA GAATTTCCTG ACAAGTTTGA AATATCAGAT CAGGTTGATA TAGAAGTTAA TAATCTGGTA TGTAAATTCG GTGATTTTAC TGCTGTAGGA AATACATCCT TTCAGGTACA TAAAGGAGAA ATATTCGGAC TTTTGGGTCC AAACGGTGCC GGAAAAACAA CAACATTCAG AATGCTGTGC GGTTTACTGC CTTTGACAAG CGGCAGTCTG TCAGTAGCCG GTGTCGATTT GAGAAAGGCC AGAACTCAGG CCAGAGCAAA TATTGGATAT GTTGCACAAA AATTTTCTTT ATATTCAACT CTATCTGTAG AAGAAAATCT AAAATTTTTT GGCGGAGTTT ACGGTTTGAA AAGAGAAAAA CTGAAAAAAA GAATGGAAGA GGTAAAAGAG CAGTTTGAAC TCACAGGAAT GGAAACAAAG CCGAGCGGAG AACTTCCGGG AGGATTTAAA CAGCGTTTAT CAATGGCTGT AGCACTTCTT CATGAACCAA AAATACTTTT TCTTGATGAA CCGACCAGTG GTATTGATCC TTTGGCAAGG CGTTCTTTCT GGTATCAAAT AACAGCTCTT GCAGCTGAAG GAACTACAAT AATAATTACC ACACATTTTA TGGAAGAAGC AGAGTACTGC GACCGTATTA TGATACAGGA TCAGGGAAAA ATGCTGGTAC TGGGCACCCC TCAGGAAGTA AGAGAAAATG CCGGAGAAAA TGTAAAAACA ATGAATCAGG CTTTTATTGA AATAATAGAA CAGAATCGTT TACAAAATAA AATTATTTAA
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Protein sequence | MNTENVVIAE NLYKRFIAKP SKKTINALTN INIKIPAGKL TALIGPDGAG KSTFMRLICG LMTPSEGNLT VLGINTKDNP QEIQNRISYM SQRFGLYEDL SIQENLDLYA DLHGVSKKER RERFDELLKM TGLEAFTKRQ AGKLSGGMKQ KLSLACTLVR SPELLLLDEP TVGVDPLSRR ELWEILQKLV QKEKLTVLVS TAYMDEAELC QKTIVMHKSK VLDVGTPEGL RRKAADKCFK IQPPKSMPSR LIQTKLLDDK ENIIDAVPEG GAVRFIIRSK KAFDNIKKID GNLEIQKVDS RLEDGFMTLL SEYENEHNDD DDNIKEKFHI EFPDKFEISD QVDIEVNNLV CKFGDFTAVG NTSFQVHKGE IFGLLGPNGA GKTTTFRMLC GLLPLTSGSL SVAGVDLRKA RTQARANIGY VAQKFSLYST LSVEENLKFF GGVYGLKREK LKKRMEEVKE QFELTGMETK PSGELPGGFK QRLSMAVALL HEPKILFLDE PTSGIDPLAR RSFWYQITAL AAEGTTIIIT THFMEEAEYC DRIMIQDQGK MLVLGTPQEV RENAGENVKT MNQAFIEIIE QNRLQNKII
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